Protein–RNA interactions for Protein: Q9EPU4

Cpsf1, Cleavage and polyadenylation specificity factor subunit 1, mousemouse

Known RBP Predictions only

Length 1,441 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf1Q9EPU4 Gm28148-201ENSMUST00000186924 697 ntBASIC5.15□□□□□ -1.58
Cpsf1Q9EPU4 Tardbp-223ENSMUST00000189048 1096 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
Cpsf1Q9EPU4 Gm37828-201ENSMUST00000192496 432 ntBASIC5.15□□□□□ -1.58
Cpsf1Q9EPU4 Gm8939-201ENSMUST00000192577 964 ntBASIC5.15□□□□□ -1.58
Cpsf1Q9EPU4 Gm8023-201ENSMUST00000195298 903 ntBASIC5.15□□□□□ -1.58
Cpsf1Q9EPU4 Gm45020-201ENSMUST00000205356 381 ntTSL 3 BASIC5.15□□□□□ -1.58
Cpsf1Q9EPU4 Gm44824-201ENSMUST00000207021 229 ntBASIC5.15□□□□□ -1.58
Cpsf1Q9EPU4 Gm3565-201ENSMUST00000222670 609 ntBASIC5.15□□□□□ -1.58
Cpsf1Q9EPU4 AC154441.1-201ENSMUST00000223653 1006 ntBASIC5.15□□□□□ -1.58
Cpsf1Q9EPU4 AC129219.3-201ENSMUST00000223790 196 ntBASIC5.15□□□□□ -1.58
Cpsf1Q9EPU4 AC158142.1-201ENSMUST00000226721 416 ntBASIC5.15□□□□□ -1.58
Cpsf1Q9EPU4 AC164883.9-201ENSMUST00000228042 399 ntBASIC5.15□□□□□ -1.58
Cpsf1Q9EPU4 Olfr926-201ENSMUST00000078289 1051 ntAPPRIS P1 BASIC5.15□□□□□ -1.58
Cpsf1Q9EPU4 Cbll1-204ENSMUST00000185739 3945 ntAPPRIS ALT1 TSL 1 (best) BASIC5.15□□□□□ -1.58
Cpsf1Q9EPU4 Gm30302-202ENSMUST00000220773 3511 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
Cpsf1Q9EPU4 Ankar-201ENSMUST00000053499 4571 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.59
Cpsf1Q9EPU4 Gm11923-201ENSMUST00000118135 508 ntBASIC5.14□□□□□ -1.59
Cpsf1Q9EPU4 Gm12465-201ENSMUST00000118591 300 ntBASIC5.14□□□□□ -1.59
Cpsf1Q9EPU4 Gm17210-201ENSMUST00000169975 391 ntTSL 3 BASIC5.14□□□□□ -1.59
Cpsf1Q9EPU4 Gm21960-201ENSMUST00000181924 452 ntBASIC5.14□□□□□ -1.59
Cpsf1Q9EPU4 Gm17916-203ENSMUST00000189918 324 ntTSL 5 BASIC5.14□□□□□ -1.59
Cpsf1Q9EPU4 Gm37617-201ENSMUST00000194309 159 ntBASIC5.14□□□□□ -1.59
Cpsf1Q9EPU4 Gm44376-201ENSMUST00000197570 128 ntBASIC5.14□□□□□ -1.59
Cpsf1Q9EPU4 Gm43084-201ENSMUST00000200696 947 ntBASIC5.14□□□□□ -1.59
Cpsf1Q9EPU4 Gm17989-201ENSMUST00000211543 412 ntBASIC5.14□□□□□ -1.59
Cpsf1Q9EPU4 AC161245.1-201ENSMUST00000217207 740 ntTSL 3 BASIC5.14□□□□□ -1.59
Cpsf1Q9EPU4 AC132384.13-201ENSMUST00000219556 1159 ntBASIC5.14□□□□□ -1.59
Cpsf1Q9EPU4 CT025611.2-201ENSMUST00000220475 879 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Cpsf1Q9EPU4 AC155237.2-201ENSMUST00000228487 478 ntBASIC5.14□□□□□ -1.59
Cpsf1Q9EPU4 Defb33-201ENSMUST00000098908 424 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
Cpsf1Q9EPU4 Iigp1-201ENSMUST00000032473 3121 ntAPPRIS P1 TSL 3 BASIC5.14□□□□□ -1.59
Cpsf1Q9EPU4 Vmn1r200-202ENSMUST00000226157 5505 ntAPPRIS P2 BASIC5.14□□□□□ -1.59
Cpsf1Q9EPU4 Rbm46-203ENSMUST00000182818 2115 ntTSL 5 BASIC5.14□□□□□ -1.59
Cpsf1Q9EPU4 Gm37064-201ENSMUST00000193851 2231 ntBASIC5.14□□□□□ -1.59
Cpsf1Q9EPU4 Vmn2r82-201ENSMUST00000170596 3045 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Cpsf1Q9EPU4 Zfp280c-203ENSMUST00000088898 4024 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
Cpsf1Q9EPU4 Gm12873-201ENSMUST00000119988 422 ntBASIC5.14□□□□□ -1.59
Cpsf1Q9EPU4 Gm15387-201ENSMUST00000120421 648 ntBASIC5.14□□□□□ -1.59
Cpsf1Q9EPU4 Gm16212-202ENSMUST00000143555 420 ntTSL 3 BASIC5.14□□□□□ -1.59
Cpsf1Q9EPU4 4930406D18Rik-202ENSMUST00000152827 657 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Cpsf1Q9EPU4 Gm16303-201ENSMUST00000161498 390 ntBASIC5.14□□□□□ -1.59
Cpsf1Q9EPU4 Hmgb1-ps7-201ENSMUST00000173370 648 ntBASIC5.14□□□□□ -1.59
Cpsf1Q9EPU4 Gm45031-201ENSMUST00000206800 288 ntBASIC5.14□□□□□ -1.59
Cpsf1Q9EPU4 Olfr1480-203ENSMUST00000207904 1209 ntAPPRIS P1 TSL 3 BASIC5.14□□□□□ -1.59
Cpsf1Q9EPU4 Gm5518-201ENSMUST00000084171 648 ntBASIC5.14□□□□□ -1.59
Cpsf1Q9EPU4 Olfr1100-201ENSMUST00000094913 969 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Cpsf1Q9EPU4 Spc25-201ENSMUST00000005365 1352 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
Cpsf1Q9EPU4 Arrdc3-201ENSMUST00000099356 4101 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Cpsf1Q9EPU4 Cfhr1-201ENSMUST00000023965 1793 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Cpsf1Q9EPU4 Nae1-201ENSMUST00000034349 1808 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Cpsf1Q9EPU4 Gm37777-201ENSMUST00000195546 3366 ntBASIC5.13□□□□□ -1.59
Cpsf1Q9EPU4 Ccr5-202ENSMUST00000111442 8227 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Cpsf1Q9EPU4 Olfr1369-ps1-204ENSMUST00000215207 3794 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Cpsf1Q9EPU4 Fancb-201ENSMUST00000057150 2422 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
Cpsf1Q9EPU4 Gm22590-201ENSMUST00000104247 128 ntBASIC5.13□□□□□ -1.59
Cpsf1Q9EPU4 Olfr1177-ps-201ENSMUST00000137895 921 ntAPPRIS ALT2 BASIC5.13□□□□□ -1.59
Cpsf1Q9EPU4 Gm11579-201ENSMUST00000145502 845 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Cpsf1Q9EPU4 Gm23667-201ENSMUST00000157466 120 ntBASIC5.13□□□□□ -1.59
Cpsf1Q9EPU4 Gm23902-201ENSMUST00000157571 134 ntBASIC5.13□□□□□ -1.59
Cpsf1Q9EPU4 V1rd19-201ENSMUST00000173571 1157 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Cpsf1Q9EPU4 Gm24369-201ENSMUST00000175387 96 ntBASIC5.13□□□□□ -1.59
Cpsf1Q9EPU4 Gm20834-201ENSMUST00000179558 684 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Cpsf1Q9EPU4 Obox4-ps1-201ENSMUST00000184446 700 ntBASIC5.13□□□□□ -1.59
Cpsf1Q9EPU4 Gm6680-201ENSMUST00000192789 950 ntBASIC5.13□□□□□ -1.59
Cpsf1Q9EPU4 Gm43651-201ENSMUST00000199796 439 ntBASIC5.13□□□□□ -1.59
Cpsf1Q9EPU4 Gm40271-201ENSMUST00000221752 422 ntTSL 3 BASIC5.13□□□□□ -1.59
Cpsf1Q9EPU4 Olfr818-201ENSMUST00000074308 957 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Cpsf1Q9EPU4 Gm5185-201ENSMUST00000080271 619 ntBASIC5.13□□□□□ -1.59
Cpsf1Q9EPU4 Gm23925-201ENSMUST00000082471 132 ntBASIC5.13□□□□□ -1.59
Cpsf1Q9EPU4 Serpinb9f-201ENSMUST00000075515 1912 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Cpsf1Q9EPU4 Gm45176-201ENSMUST00000207696 4096 ntBASIC5.13□□□□□ -1.59
Cpsf1Q9EPU4 Vmn2r19-201ENSMUST00000073948 2565 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Cpsf1Q9EPU4 Olfr1023-202ENSMUST00000213441 4740 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Cpsf1Q9EPU4 Zfp62-212ENSMUST00000180016 3964 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Cpsf1Q9EPU4 9530051G07Rik-201ENSMUST00000127673 4414 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Cpsf1Q9EPU4 9130208D14Rik-201ENSMUST00000146911 7293 ntBASIC5.12□□□□□ -1.59
Cpsf1Q9EPU4 Gm10340-201ENSMUST00000170790 1755 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Cpsf1Q9EPU4 Syne2-201ENSMUST00000044217 21690 ntAPPRIS P2 TSL 5 BASIC5.12□□□□□ -1.59
Cpsf1Q9EPU4 Rnf213-202ENSMUST00000131035 16716 ntAPPRIS P5 TSL 5 BASIC5.12□□□□□ -1.59
Cpsf1Q9EPU4 Rnf213-201ENSMUST00000093902 16716 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
Cpsf1Q9EPU4 Gm13762-201ENSMUST00000144908 2612 ntAPPRIS P1 TSL 3 BASIC5.12□□□□□ -1.59
Cpsf1Q9EPU4 Vps13d-202ENSMUST00000036579 15849 ntAPPRIS P2 TSL 5 BASIC5.12□□□□□ -1.59
Cpsf1Q9EPU4 Dync2h1-204ENSMUST00000140466 14264 ntAPPRIS P2 TSL 5 BASIC5.12□□□□□ -1.59
Cpsf1Q9EPU4 Gm14015-201ENSMUST00000130634 3949 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Cpsf1Q9EPU4 Gm12543-201ENSMUST00000120410 543 ntBASIC5.12□□□□□ -1.59
Cpsf1Q9EPU4 Gm13865-201ENSMUST00000120957 865 ntBASIC5.12□□□□□ -1.59
Cpsf1Q9EPU4 Gm13266-201ENSMUST00000141869 579 ntTSL 2 BASIC5.12□□□□□ -1.59
Cpsf1Q9EPU4 Gm12204-201ENSMUST00000147412 333 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Cpsf1Q9EPU4 Gm23123-201ENSMUST00000157648 144 ntBASIC5.12□□□□□ -1.59
Cpsf1Q9EPU4 Gm24727-201ENSMUST00000158231 144 ntBASIC5.12□□□□□ -1.59
Cpsf1Q9EPU4 Gm25037-201ENSMUST00000175418 110 ntBASIC5.12□□□□□ -1.59
Cpsf1Q9EPU4 Gm17966-201ENSMUST00000193453 594 ntBASIC5.12□□□□□ -1.59
Cpsf1Q9EPU4 2210017I01Rik-201ENSMUST00000195278 822 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Cpsf1Q9EPU4 Gm44040-201ENSMUST00000203360 545 ntTSL 3 BASIC5.12□□□□□ -1.59
Cpsf1Q9EPU4 Olfr262-201ENSMUST00000087818 939 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Cpsf1Q9EPU4 Gm26835-201ENSMUST00000181888 3274 ntTSL 5 BASIC5.12□□□□□ -1.59
Cpsf1Q9EPU4 Slc22a30-201ENSMUST00000064507 1888 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Cpsf1Q9EPU4 Glra2-201ENSMUST00000058787 3150 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Cpsf1Q9EPU4 Hfm1-202ENSMUST00000117588 4870 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Cpsf1Q9EPU4 Steap2-204ENSMUST00000115426 10408 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 91.9 ms