Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Gm12281-201ENSMUST00000119536 298 ntBASIC6.23□□□□□ -1.41
Trim11Q99PQ2 Gm13170-201ENSMUST00000119716 643 ntBASIC6.23□□□□□ -1.41
Trim11Q99PQ2 Gm14831-201ENSMUST00000120253 409 ntBASIC6.23□□□□□ -1.41
Trim11Q99PQ2 Gm15533-201ENSMUST00000126205 465 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Trim11Q99PQ2 4930421P07Rik-201ENSMUST00000147322 399 ntBASIC6.23□□□□□ -1.41
Trim11Q99PQ2 Vmn1r126-201ENSMUST00000168398 966 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Trim11Q99PQ2 Pfdn5-208ENSMUST00000170627 330 ntTSL 5 BASIC6.23□□□□□ -1.41
Trim11Q99PQ2 Gm20530-201ENSMUST00000174261 254 ntBASIC6.23□□□□□ -1.41
Trim11Q99PQ2 Gm25246-201ENSMUST00000175476 69 ntBASIC6.23□□□□□ -1.41
Trim11Q99PQ2 Gm26556-201ENSMUST00000180645 320 ntBASIC6.23□□□□□ -1.41
Trim11Q99PQ2 Gm8941-201ENSMUST00000181451 899 ntBASIC6.23□□□□□ -1.41
Trim11Q99PQ2 Rps12-ps24-201ENSMUST00000182321 381 ntBASIC6.23□□□□□ -1.41
Trim11Q99PQ2 Gm27855-201ENSMUST00000184122 128 ntBASIC6.23□□□□□ -1.41
Trim11Q99PQ2 Scgb2b6-201ENSMUST00000188132 330 ntBASIC6.23□□□□□ -1.41
Trim11Q99PQ2 2610509F24Rik-201ENSMUST00000193035 838 ntBASIC6.23□□□□□ -1.41
Trim11Q99PQ2 Gm38008-201ENSMUST00000195333 518 ntBASIC6.23□□□□□ -1.41
Trim11Q99PQ2 Ighv12-1-201ENSMUST00000195542 329 ntBASIC6.23□□□□□ -1.41
Trim11Q99PQ2 Gm43444-201ENSMUST00000198123 291 ntBASIC6.23□□□□□ -1.41
Trim11Q99PQ2 Gm6719-201ENSMUST00000202067 335 ntBASIC6.23□□□□□ -1.41
Trim11Q99PQ2 Gm18009-201ENSMUST00000203239 1016 ntBASIC6.23□□□□□ -1.41
Trim11Q99PQ2 Gm3442-201ENSMUST00000216808 710 ntBASIC6.23□□□□□ -1.41
Trim11Q99PQ2 AC069561.3-201ENSMUST00000217321 114 ntBASIC6.23□□□□□ -1.41
Trim11Q99PQ2 AC134468.1-201ENSMUST00000220869 299 ntTSL 5 BASIC6.23□□□□□ -1.41
Trim11Q99PQ2 AC154552.4-201ENSMUST00000222171 151 ntBASIC6.23□□□□□ -1.41
Trim11Q99PQ2 AC167192.2-201ENSMUST00000224794 198 ntBASIC6.23□□□□□ -1.41
Trim11Q99PQ2 Olfr832-201ENSMUST00000060601 939 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Trim11Q99PQ2 Mir325-201ENSMUST00000083491 98 ntBASIC6.23□□□□□ -1.41
Trim11Q99PQ2 Gm10666-201ENSMUST00000098722 966 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Trim11Q99PQ2 Vmn1r114-201ENSMUST00000098737 966 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Trim11Q99PQ2 Vmn1r93-201ENSMUST00000098747 966 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Trim11Q99PQ2 Gm43466-201ENSMUST00000197836 5214 ntBASIC6.23□□□□□ -1.41
Trim11Q99PQ2 Macf1-204ENSMUST00000106213 18957 ntTSL 5 BASIC6.23□□□□□ -1.41
Trim11Q99PQ2 Gm13648-201ENSMUST00000138361 1536 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Trim11Q99PQ2 Olfr934-202ENSMUST00000214324 2462 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Trim11Q99PQ2 Zfp78-206ENSMUST00000208390 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
Trim11Q99PQ2 Ifi202b-201ENSMUST00000000266 1697 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Trim11Q99PQ2 AC158388.2-201ENSMUST00000223665 1314 ntBASIC6.23□□□□□ -1.41
Trim11Q99PQ2 Vps50-202ENSMUST00000164052 4824 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Trim11Q99PQ2 Olfr877-202ENSMUST00000213956 2761 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Trim11Q99PQ2 Gm45149-201ENSMUST00000206459 2172 ntBASIC6.23□□□□□ -1.41
Trim11Q99PQ2 Gm35256-201ENSMUST00000212780 3269 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Trim11Q99PQ2 Phf11d-201ENSMUST00000095157 2666 ntAPPRIS P2 TSL 1 (best) BASIC6.22□□□□□ -1.41
Trim11Q99PQ2 Tom1l1-204ENSMUST00000107869 1826 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Trim11Q99PQ2 Olfr1338-203ENSMUST00000216559 2829 ntAPPRIS ALT1 TSL 5 BASIC6.22□□□□□ -1.41
Trim11Q99PQ2 AC154573.1-201ENSMUST00000225913 4659 ntBASIC6.22□□□□□ -1.41
Trim11Q99PQ2 Dock11-202ENSMUST00000115264 1725 ntTSL 5 BASIC6.22□□□□□ -1.41
Trim11Q99PQ2 AC192616.2-201ENSMUST00000221482 3841 ntBASIC6.22□□□□□ -1.41
Trim11Q99PQ2 Ncoa7-203ENSMUST00000213836 2989 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
Trim11Q99PQ2 Vmn1r27-202ENSMUST00000226666 2969 ntAPPRIS ALT2 BASIC6.22□□□□□ -1.41
Trim11Q99PQ2 8430419K02Rik-201ENSMUST00000128654 1870 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Trim11Q99PQ2 Gm38351-201ENSMUST00000195466 2518 ntBASIC6.22□□□□□ -1.41
Trim11Q99PQ2 Olfr364-ps1-201ENSMUST00000104995 1766 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Trim11Q99PQ2 Gm10378-201ENSMUST00000100696 429 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Trim11Q99PQ2 Gm26300-201ENSMUST00000102282 94 ntBASIC6.22□□□□□ -1.41
Trim11Q99PQ2 Gm24338-201ENSMUST00000104205 127 ntBASIC6.22□□□□□ -1.41
Trim11Q99PQ2 Hmgn2l6-201ENSMUST00000115986 267 ntBASIC6.22□□□□□ -1.41
Trim11Q99PQ2 Gm11346-201ENSMUST00000118346 704 ntBASIC6.22□□□□□ -1.41
Trim11Q99PQ2 Gm9225-201ENSMUST00000121921 836 ntBASIC6.22□□□□□ -1.41
Trim11Q99PQ2 Gm23792-201ENSMUST00000122557 93 ntBASIC6.22□□□□□ -1.41
Trim11Q99PQ2 Gm11844-201ENSMUST00000129207 459 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Trim11Q99PQ2 Gm13752-201ENSMUST00000138195 491 ntTSL 5 BASIC6.22□□□□□ -1.41
Trim11Q99PQ2 Clec5a-204ENSMUST00000177178 665 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
Trim11Q99PQ2 Gm8356-203ENSMUST00000178896 615 ntTSL 5 BASIC6.22□□□□□ -1.41
Trim11Q99PQ2 Cypt14-201ENSMUST00000179096 508 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Trim11Q99PQ2 Gm26988-201ENSMUST00000183296 945 ntBASIC6.22□□□□□ -1.41
Trim11Q99PQ2 Mir7046-201ENSMUST00000183435 66 ntBASIC6.22□□□□□ -1.41
Trim11Q99PQ2 Gm27210-201ENSMUST00000184263 402 ntBASIC6.22□□□□□ -1.41
Trim11Q99PQ2 Mir6989-201ENSMUST00000184812 65 ntBASIC6.22□□□□□ -1.41
Trim11Q99PQ2 1700108J01Rik-201ENSMUST00000187423 484 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Trim11Q99PQ2 Gm28357-201ENSMUST00000190256 622 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Trim11Q99PQ2 Ighv3-7-201ENSMUST00000193370 348 ntBASIC6.22□□□□□ -1.41
Trim11Q99PQ2 Gm45063-201ENSMUST00000203726 472 ntBASIC6.22□□□□□ -1.41
Trim11Q99PQ2 Gm44214-201ENSMUST00000204153 606 ntBASIC6.22□□□□□ -1.41
Trim11Q99PQ2 AC183268.2-201ENSMUST00000214513 446 ntBASIC6.22□□□□□ -1.41
Trim11Q99PQ2 AC105407.3-201ENSMUST00000224161 648 ntBASIC6.22□□□□□ -1.41
Trim11Q99PQ2 Prl-203ENSMUST00000224228 888 ntAPPRIS ALT2 BASIC6.22□□□□□ -1.41
Trim11Q99PQ2 AC154556.1-201ENSMUST00000224587 885 ntBASIC6.22□□□□□ -1.41
Trim11Q99PQ2 Bcl2a1c-201ENSMUST00000066460 444 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Trim11Q99PQ2 Gm22423-201ENSMUST00000082861 184 ntBASIC6.22□□□□□ -1.41
Trim11Q99PQ2 Gm7995-201ENSMUST00000089789 429 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Trim11Q99PQ2 4932438A13Rik-201ENSMUST00000057272 15883 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Trim11Q99PQ2 Gm42860-201ENSMUST00000196492 3991 ntBASIC6.22□□□□□ -1.41
Trim11Q99PQ2 Btbd35f24-201ENSMUST00000178080 1941 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Trim11Q99PQ2 Amy2a5-201ENSMUST00000098673 3715 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Trim11Q99PQ2 Gm44164-201ENSMUST00000203605 2561 ntBASIC6.22□□□□□ -1.41
Trim11Q99PQ2 Iqca-207ENSMUST00000212394 2574 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
Trim11Q99PQ2 Elavl4-201ENSMUST00000102722 4107 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
Trim11Q99PQ2 Elavl4-203ENSMUST00000106597 4149 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Trim11Q99PQ2 Crem-230ENSMUST00000151311 2485 ntAPPRIS ALT1 TSL 5 BASIC6.22□□□□□ -1.41
Trim11Q99PQ2 Gm19950-204ENSMUST00000208167 4196 ntTSL 5 BASIC6.22□□□□□ -1.41
Trim11Q99PQ2 Olfr448-202ENSMUST00000213952 3024 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Trim11Q99PQ2 Zfp763-201ENSMUST00000087654 3407 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Trim11Q99PQ2 Sri-202ENSMUST00000088786 2504 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Trim11Q99PQ2 Spef2-204ENSMUST00000160236 5313 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
Trim11Q99PQ2 Olfr1357-202ENSMUST00000203305 2286 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Trim11Q99PQ2 Olfr1263-202ENSMUST00000214382 4400 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Trim11Q99PQ2 Cpb2-201ENSMUST00000022576 1477 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Trim11Q99PQ2 Tlr13-201ENSMUST00000040065 4060 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
Trim11Q99PQ2 Gm4070-202ENSMUST00000176467 9007 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
Trim11Q99PQ2 Ctsm-202ENSMUST00000223778 1905 ntAPPRIS P1 BASIC6.21□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 86.2 ms