Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Gm23354-201ENSMUST00000158426 104 ntBASIC5.08□□□□□ -1.6
Trim8Q99PJ2 Gm22530-201ENSMUST00000158820 118 ntBASIC5.08□□□□□ -1.6
Trim8Q99PJ2 Vmn1r-ps66-201ENSMUST00000173436 612 ntBASIC5.08□□□□□ -1.6
Trim8Q99PJ2 Malat1-203ENSMUST00000173499 485 ntTSL 3 BASIC5.08□□□□□ -1.6
Trim8Q99PJ2 Gm22776-201ENSMUST00000178634 94 ntBASIC5.08□□□□□ -1.6
Trim8Q99PJ2 Gm23767-201ENSMUST00000179278 94 ntBASIC5.08□□□□□ -1.6
Trim8Q99PJ2 Snhg6-205ENSMUST00000182819 816 ntTSL 2 BASIC5.08□□□□□ -1.6
Trim8Q99PJ2 Gm27905-201ENSMUST00000184005 207 ntBASIC5.08□□□□□ -1.6
Trim8Q99PJ2 Gm27887-201ENSMUST00000184367 102 ntBASIC5.08□□□□□ -1.6
Trim8Q99PJ2 Gm18667-201ENSMUST00000186523 484 ntBASIC5.08□□□□□ -1.6
Trim8Q99PJ2 Gm9569-201ENSMUST00000187492 787 ntBASIC5.08□□□□□ -1.6
Trim8Q99PJ2 Gm28802-201ENSMUST00000188624 944 ntBASIC5.08□□□□□ -1.6
Trim8Q99PJ2 Sprr2g-202ENSMUST00000189634 651 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Trim8Q99PJ2 Gm37184-201ENSMUST00000194720 650 ntTSL 3 BASIC5.08□□□□□ -1.6
Trim8Q99PJ2 Gm43516-201ENSMUST00000196891 322 ntBASIC5.08□□□□□ -1.6
Trim8Q99PJ2 Mir219c-201ENSMUST00000199860 60 ntBASIC5.08□□□□□ -1.6
Trim8Q99PJ2 Gm43428-201ENSMUST00000200108 3845 ntBASIC5.08□□□□□ -1.6
Trim8Q99PJ2 Gm45249-201ENSMUST00000211021 348 ntBASIC5.08□□□□□ -1.6
Trim8Q99PJ2 Gm17999-201ENSMUST00000211568 542 ntBASIC5.08□□□□□ -1.6
Trim8Q99PJ2 H60c-203ENSMUST00000216211 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
Trim8Q99PJ2 Gm8125-201ENSMUST00000216602 738 ntBASIC5.08□□□□□ -1.6
Trim8Q99PJ2 Gm4263-201ENSMUST00000220693 1101 ntBASIC5.08□□□□□ -1.6
Trim8Q99PJ2 AC124426.2-201ENSMUST00000220886 404 ntTSL 5 BASIC5.08□□□□□ -1.6
Trim8Q99PJ2 AC159619.2-201ENSMUST00000222924 401 ntBASIC5.08□□□□□ -1.6
Trim8Q99PJ2 AC156802.1-201ENSMUST00000223623 579 ntBASIC5.08□□□□□ -1.6
Trim8Q99PJ2 AC139294.1-201ENSMUST00000226708 571 ntBASIC5.08□□□□□ -1.6
Trim8Q99PJ2 CT573086.3-201ENSMUST00000228762 594 ntBASIC5.08□□□□□ -1.6
Trim8Q99PJ2 Sprr2g-201ENSMUST00000056590 650 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Trim8Q99PJ2 Ghrl-201ENSMUST00000064993 527 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
Trim8Q99PJ2 Gm6462-201ENSMUST00000081488 304 ntBASIC5.08□□□□□ -1.6
Trim8Q99PJ2 Gm25404-201ENSMUST00000082970 107 ntBASIC5.08□□□□□ -1.6
Trim8Q99PJ2 Mir331-201ENSMUST00000083673 96 ntBASIC5.08□□□□□ -1.6
Trim8Q99PJ2 Gm23516-201ENSMUST00000093728 107 ntBASIC5.08□□□□□ -1.6
Trim8Q99PJ2 Olfr592-201ENSMUST00000098207 939 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Trim8Q99PJ2 Olfr1216-201ENSMUST00000099800 936 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Trim8Q99PJ2 Abcg2-201ENSMUST00000031822 5717 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Trim8Q99PJ2 Vmn2r85-201ENSMUST00000171811 3042 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Trim8Q99PJ2 Gm8402-201ENSMUST00000118183 1770 ntBASIC5.08□□□□□ -1.6
Trim8Q99PJ2 Gm8383-201ENSMUST00000121179 1770 ntBASIC5.08□□□□□ -1.6
Trim8Q99PJ2 Gm43376-202ENSMUST00000199747 1743 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Trim8Q99PJ2 Gm13972-201ENSMUST00000153726 3164 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Trim8Q99PJ2 Gm20939-201ENSMUST00000108007 1572 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Trim8Q99PJ2 Mmp12-201ENSMUST00000005950 3607 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
Trim8Q99PJ2 Abi3bp-202ENSMUST00000096012 4387 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
Trim8Q99PJ2 Gm37529-201ENSMUST00000195618 4321 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Trim8Q99PJ2 Olfr310-202ENSMUST00000217724 1400 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Trim8Q99PJ2 Rabgap1-202ENSMUST00000066055 4247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
Trim8Q99PJ2 Clec5a-202ENSMUST00000101491 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
Trim8Q99PJ2 Gm16185-201ENSMUST00000125071 3207 ntTSL 5 BASIC5.07□□□□□ -1.6
Trim8Q99PJ2 Olfr348-203ENSMUST00000214909 3634 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Trim8Q99PJ2 Olfr1226-206ENSMUST00000217601 2670 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Trim8Q99PJ2 Olfr1366-202ENSMUST00000175637 3045 ntAPPRIS ALT2 TSL 3 BASIC5.07□□□□□ -1.6
Trim8Q99PJ2 Ank2-207ENSMUST00000182064 12413 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
Trim8Q99PJ2 Trav6-1-201ENSMUST00000103571 338 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Trim8Q99PJ2 Gm22592-201ENSMUST00000104242 131 ntBASIC5.07□□□□□ -1.6
Trim8Q99PJ2 Gm15148-201ENSMUST00000117602 156 ntBASIC5.07□□□□□ -1.6
Trim8Q99PJ2 Gm15772-201ENSMUST00000118533 438 ntBASIC5.07□□□□□ -1.6
Trim8Q99PJ2 Gm14899-201ENSMUST00000118673 548 ntBASIC5.07□□□□□ -1.6
Trim8Q99PJ2 Gm11623-201ENSMUST00000120176 1225 ntBASIC5.07□□□□□ -1.6
Trim8Q99PJ2 Gm13557-201ENSMUST00000120771 382 ntBASIC5.07□□□□□ -1.6
Trim8Q99PJ2 Gm13077-201ENSMUST00000121941 484 ntBASIC5.07□□□□□ -1.6
Trim8Q99PJ2 n-R5s21-201ENSMUST00000122692 117 ntBASIC5.07□□□□□ -1.6
Trim8Q99PJ2 Gm13180-201ENSMUST00000141222 440 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Trim8Q99PJ2 4930441J16Rik-201ENSMUST00000153743 516 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Trim8Q99PJ2 Gm23981-201ENSMUST00000157136 106 ntBASIC5.07□□□□□ -1.6
Trim8Q99PJ2 Gm23669-201ENSMUST00000157470 128 ntBASIC5.07□□□□□ -1.6
Trim8Q99PJ2 Gm25489-201ENSMUST00000158727 141 ntBASIC5.07□□□□□ -1.6
Trim8Q99PJ2 Vmn1r-ps84-201ENSMUST00000172853 923 ntBASIC5.07□□□□□ -1.6
Trim8Q99PJ2 Gm20612-201ENSMUST00000176318 236 ntBASIC5.07□□□□□ -1.6
Trim8Q99PJ2 Obox3-ps2-201ENSMUST00000177243 1004 ntBASIC5.07□□□□□ -1.6
Trim8Q99PJ2 Gm20619-204ENSMUST00000181343 786 ntTSL 5 BASIC5.07□□□□□ -1.6
Trim8Q99PJ2 Mir6971-201ENSMUST00000183497 63 ntBASIC5.07□□□□□ -1.6
Trim8Q99PJ2 Gm27242-201ENSMUST00000184211 1151 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Trim8Q99PJ2 Gm28596-201ENSMUST00000185870 696 ntBASIC5.07□□□□□ -1.6
Trim8Q99PJ2 Gm29038-201ENSMUST00000191543 678 ntBASIC5.07□□□□□ -1.6
Trim8Q99PJ2 Gm32295-201ENSMUST00000192558 696 ntBASIC5.07□□□□□ -1.6
Trim8Q99PJ2 Gm31260-201ENSMUST00000193478 696 ntBASIC5.07□□□□□ -1.6
Trim8Q99PJ2 Gm37650-201ENSMUST00000193570 248 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Trim8Q99PJ2 Gm36017-201ENSMUST00000199005 923 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Trim8Q99PJ2 Gm42927-201ENSMUST00000200624 3841 ntBASIC5.07□□□□□ -1.6
Trim8Q99PJ2 Klrb1b-204ENSMUST00000205130 917 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
Trim8Q99PJ2 Gm30928-201ENSMUST00000205858 459 ntTSL 3 BASIC5.07□□□□□ -1.6
Trim8Q99PJ2 2610306O10Rik-201ENSMUST00000206512 612 ntBASIC5.07□□□□□ -1.6
Trim8Q99PJ2 Gm33626-201ENSMUST00000206790 828 ntBASIC5.07□□□□□ -1.6
Trim8Q99PJ2 Gm31510-202ENSMUST00000206795 239 ntTSL 3 BASIC5.07□□□□□ -1.6
Trim8Q99PJ2 Gm44820-201ENSMUST00000207420 396 ntBASIC5.07□□□□□ -1.6
Trim8Q99PJ2 4930598N05Rik-204ENSMUST00000207733 675 ntTSL 3 BASIC5.07□□□□□ -1.6
Trim8Q99PJ2 Gm32531-201ENSMUST00000209324 373 ntTSL 3 BASIC5.07□□□□□ -1.6
Trim8Q99PJ2 Gm36368-201ENSMUST00000212026 461 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Trim8Q99PJ2 Gm18729-201ENSMUST00000217230 621 ntBASIC5.07□□□□□ -1.6
Trim8Q99PJ2 AC119892.1-201ENSMUST00000217997 384 ntTSL 3 BASIC5.07□□□□□ -1.6
Trim8Q99PJ2 5330439M10Rik-201ENSMUST00000218667 348 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Trim8Q99PJ2 AC156798.1-201ENSMUST00000220508 224 ntBASIC5.07□□□□□ -1.6
Trim8Q99PJ2 AC123705.4-201ENSMUST00000222411 493 ntTSL 3 BASIC5.07□□□□□ -1.6
Trim8Q99PJ2 AC174797.2-203ENSMUST00000224017 716 ntBASIC5.07□□□□□ -1.6
Trim8Q99PJ2 3830406C13Rik-217ENSMUST00000225773 417 ntBASIC5.07□□□□□ -1.6
Trim8Q99PJ2 AC168062.2-201ENSMUST00000228907 422 ntBASIC5.07□□□□□ -1.6
Trim8Q99PJ2 Gm9762-201ENSMUST00000036976 444 ntBASIC5.07□□□□□ -1.6
Trim8Q99PJ2 1110032A03Rik-202ENSMUST00000042576 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
Trim8Q99PJ2 Olfr741-201ENSMUST00000071932 936 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 84.7 ms