Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Gm6884-201ENSMUST00000119318 615 ntBASIC6.32□□□□□ -1.4
Pcdhb3Q91XZ7 Gm13604-201ENSMUST00000119332 482 ntBASIC6.32□□□□□ -1.4
Pcdhb3Q91XZ7 Gm4234-201ENSMUST00000119747 714 ntBASIC6.32□□□□□ -1.4
Pcdhb3Q91XZ7 Gm13932-201ENSMUST00000120873 610 ntBASIC6.32□□□□□ -1.4
Pcdhb3Q91XZ7 Gm12434-201ENSMUST00000141580 653 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Pcdhb3Q91XZ7 Gm15935-202ENSMUST00000141656 298 ntTSL 2 BASIC6.32□□□□□ -1.4
Pcdhb3Q91XZ7 Gm15564-201ENSMUST00000144134 545 ntTSL 3 BASIC6.32□□□□□ -1.4
Pcdhb3Q91XZ7 Gm25666-201ENSMUST00000157702 107 ntBASIC6.32□□□□□ -1.4
Pcdhb3Q91XZ7 Gm24858-201ENSMUST00000158058 323 ntBASIC6.32□□□□□ -1.4
Pcdhb3Q91XZ7 Gm16102-201ENSMUST00000160955 420 ntBASIC6.32□□□□□ -1.4
Pcdhb3Q91XZ7 Six3os1-204ENSMUST00000161688 567 ntTSL 3 BASIC6.32□□□□□ -1.4
Pcdhb3Q91XZ7 Ighv2-6-201ENSMUST00000179657 350 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Pcdhb3Q91XZ7 Gm26731-201ENSMUST00000180683 543 ntBASIC6.32□□□□□ -1.4
Pcdhb3Q91XZ7 Trav6-3-202ENSMUST00000183604 305 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Pcdhb3Q91XZ7 Gm27928-201ENSMUST00000183747 256 ntBASIC6.32□□□□□ -1.4
Pcdhb3Q91XZ7 Trav6d-3-202ENSMUST00000184883 308 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Pcdhb3Q91XZ7 Gm28263-201ENSMUST00000185884 400 ntBASIC6.32□□□□□ -1.4
Pcdhb3Q91XZ7 Scgb1b34-ps-201ENSMUST00000187959 331 ntBASIC6.32□□□□□ -1.4
Pcdhb3Q91XZ7 1700023F02Rik-203ENSMUST00000189619 473 ntTSL 3 BASIC6.32□□□□□ -1.4
Pcdhb3Q91XZ7 Gm29594-201ENSMUST00000191181 398 ntTSL 5 BASIC6.32□□□□□ -1.4
Pcdhb3Q91XZ7 Gm7019-201ENSMUST00000194122 369 ntBASIC6.32□□□□□ -1.4
Pcdhb3Q91XZ7 Gm18036-201ENSMUST00000195256 272 ntBASIC6.32□□□□□ -1.4
Pcdhb3Q91XZ7 Gm44342-201ENSMUST00000196874 129 ntBASIC6.32□□□□□ -1.4
Pcdhb3Q91XZ7 Gm44383-201ENSMUST00000198940 129 ntBASIC6.32□□□□□ -1.4
Pcdhb3Q91XZ7 Rho-205ENSMUST00000203877 939 ntTSL 2 BASIC6.32□□□□□ -1.4
Pcdhb3Q91XZ7 Gm44157-201ENSMUST00000204720 410 ntBASIC6.32□□□□□ -1.4
Pcdhb3Q91XZ7 Gm45252-201ENSMUST00000211579 397 ntBASIC6.32□□□□□ -1.4
Pcdhb3Q91XZ7 Gm45879-201ENSMUST00000212521 392 ntBASIC6.32□□□□□ -1.4
Pcdhb3Q91XZ7 Gm45710-201ENSMUST00000212847 215 ntBASIC6.32□□□□□ -1.4
Pcdhb3Q91XZ7 AC123944.2-201ENSMUST00000215290 382 ntBASIC6.32□□□□□ -1.4
Pcdhb3Q91XZ7 AC122327.2-201ENSMUST00000220883 120 ntBASIC6.32□□□□□ -1.4
Pcdhb3Q91XZ7 Selenok-ps5-201ENSMUST00000221048 278 ntBASIC6.32□□□□□ -1.4
Pcdhb3Q91XZ7 AC122327.3-201ENSMUST00000221852 120 ntBASIC6.32□□□□□ -1.4
Pcdhb3Q91XZ7 AC166341.1-201ENSMUST00000223360 105 ntBASIC6.32□□□□□ -1.4
Pcdhb3Q91XZ7 CT025667.1-201ENSMUST00000225872 382 ntBASIC6.32□□□□□ -1.4
Pcdhb3Q91XZ7 Snord47-201ENSMUST00000083034 77 ntBASIC6.32□□□□□ -1.4
Pcdhb3Q91XZ7 Gm22577-201ENSMUST00000083731 109 ntBASIC6.32□□□□□ -1.4
Pcdhb3Q91XZ7 D630023O14Rik-201ENSMUST00000191913 3099 ntBASIC6.32□□□□□ -1.4
Pcdhb3Q91XZ7 Btbd35f24-201ENSMUST00000178080 1941 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Pcdhb3Q91XZ7 Olfr1338-203ENSMUST00000216559 2829 ntAPPRIS ALT1 TSL 5 BASIC6.32□□□□□ -1.4
Pcdhb3Q91XZ7 Gm35256-201ENSMUST00000212780 3269 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Pcdhb3Q91XZ7 Ipo11-205ENSMUST00000186033 4147 ntTSL 5 BASIC6.32□□□□□ -1.4
Pcdhb3Q91XZ7 P2ry12-203ENSMUST00000196583 2344 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Pcdhb3Q91XZ7 1700129L04Rik-202ENSMUST00000189291 1401 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Pcdhb3Q91XZ7 Ckap5-203ENSMUST00000111337 6384 ntTSL 5 BASIC6.32□□□□□ -1.4
Pcdhb3Q91XZ7 Olfr360-202ENSMUST00000216706 1816 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Pcdhb3Q91XZ7 Gm42496-201ENSMUST00000197976 3241 ntBASIC6.31□□□□□ -1.4
Pcdhb3Q91XZ7 Gm38198-201ENSMUST00000191772 3581 ntBASIC6.31□□□□□ -1.4
Pcdhb3Q91XZ7 Kcnma1-202ENSMUST00000074983 3974 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
Pcdhb3Q91XZ7 Trim2-204ENSMUST00000107692 7161 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Pcdhb3Q91XZ7 Wdr17-206ENSMUST00000144711 4720 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
Pcdhb3Q91XZ7 Acpp-201ENSMUST00000062723 4483 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
Pcdhb3Q91XZ7 Gm3896-201ENSMUST00000176020 4094 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Pcdhb3Q91XZ7 Mir99ahg-201ENSMUST00000068704 2858 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Pcdhb3Q91XZ7 Skil-204ENSMUST00000118470 6578 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
Pcdhb3Q91XZ7 Gm22256-201ENSMUST00000102291 107 ntBASIC6.31□□□□□ -1.4
Pcdhb3Q91XZ7 Ighv1-26-201ENSMUST00000103510 351 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Pcdhb3Q91XZ7 Rps12-ps7-201ENSMUST00000117169 385 ntBASIC6.31□□□□□ -1.4
Pcdhb3Q91XZ7 Gm13141-201ENSMUST00000117417 456 ntBASIC6.31□□□□□ -1.4
Pcdhb3Q91XZ7 Gm5166-201ENSMUST00000121332 573 ntBASIC6.31□□□□□ -1.4
Pcdhb3Q91XZ7 Gm13715-201ENSMUST00000136578 411 ntTSL 3 BASIC6.31□□□□□ -1.4
Pcdhb3Q91XZ7 Gm22381-201ENSMUST00000158186 107 ntBASIC6.31□□□□□ -1.4
Pcdhb3Q91XZ7 Gm24577-201ENSMUST00000158580 63 ntBASIC6.31□□□□□ -1.4
Pcdhb3Q91XZ7 Gm18343-201ENSMUST00000172802 604 ntBASIC6.31□□□□□ -1.4
Pcdhb3Q91XZ7 Gm9285-201ENSMUST00000177691 697 ntBASIC6.31□□□□□ -1.4
Pcdhb3Q91XZ7 Gm20830-201ENSMUST00000178016 684 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Pcdhb3Q91XZ7 Gm20812-201ENSMUST00000179220 684 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Pcdhb3Q91XZ7 Gm26557-201ENSMUST00000180756 493 ntBASIC6.31□□□□□ -1.4
Pcdhb3Q91XZ7 Gm5345-201ENSMUST00000183076 1014 ntBASIC6.31□□□□□ -1.4
Pcdhb3Q91XZ7 Pou6f2-206ENSMUST00000184299 793 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Pcdhb3Q91XZ7 Gm27747-201ENSMUST00000184707 85 ntBASIC6.31□□□□□ -1.4
Pcdhb3Q91XZ7 Gm21673-201ENSMUST00000186640 436 ntBASIC6.31□□□□□ -1.4
Pcdhb3Q91XZ7 Gm21135-201ENSMUST00000189023 436 ntBASIC6.31□□□□□ -1.4
Pcdhb3Q91XZ7 Scgb1b5-ps-201ENSMUST00000189491 280 ntBASIC6.31□□□□□ -1.4
Pcdhb3Q91XZ7 Gm42543-201ENSMUST00000198756 353 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Pcdhb3Q91XZ7 Gm6520-201ENSMUST00000200636 410 ntBASIC6.31□□□□□ -1.4
Pcdhb3Q91XZ7 Gm43262-201ENSMUST00000202970 1219 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Pcdhb3Q91XZ7 Gm32591-202ENSMUST00000204063 403 ntTSL 3 BASIC6.31□□□□□ -1.4
Pcdhb3Q91XZ7 Olfr278-ps1-201ENSMUST00000205676 238 ntBASIC6.31□□□□□ -1.4
Pcdhb3Q91XZ7 Olfr562-ps1-201ENSMUST00000210779 951 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Pcdhb3Q91XZ7 AC153938.2-201ENSMUST00000218388 580 ntTSL 5 BASIC6.31□□□□□ -1.4
Pcdhb3Q91XZ7 AC102312.1-203ENSMUST00000219530 763 ntTSL 2 BASIC6.31□□□□□ -1.4
Pcdhb3Q91XZ7 AC154576.1-201ENSMUST00000225864 563 ntBASIC6.31□□□□□ -1.4
Pcdhb3Q91XZ7 AC123533.2-201ENSMUST00000228176 375 ntBASIC6.31□□□□□ -1.4
Pcdhb3Q91XZ7 Olfr564-201ENSMUST00000061096 951 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Pcdhb3Q91XZ7 AW822073-201ENSMUST00000075305 555 ntBASIC6.31□□□□□ -1.4
Pcdhb3Q91XZ7 Gm14851-201ENSMUST00000077452 351 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Pcdhb3Q91XZ7 Zfy2-202ENSMUST00000187148 2846 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Pcdhb3Q91XZ7 C920009B18Rik-202ENSMUST00000181223 4535 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Pcdhb3Q91XZ7 2610203C20Rik-206ENSMUST00000181814 2996 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Pcdhb3Q91XZ7 Ogdh-202ENSMUST00000081894 4114 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Pcdhb3Q91XZ7 Tecrl-201ENSMUST00000053543 2350 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Pcdhb3Q91XZ7 Vmn1r63-201ENSMUST00000075085 2172 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Pcdhb3Q91XZ7 Gm26691-202ENSMUST00000181952 4183 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Pcdhb3Q91XZ7 Fam227b-204ENSMUST00000178118 1599 ntAPPRIS P2 TSL 5 BASIC6.31□□□□□ -1.4
Pcdhb3Q91XZ7 Clec4a2-202ENSMUST00000041779 2481 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
Pcdhb3Q91XZ7 Slc22a29-201ENSMUST00000113298 2271 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Pcdhb3Q91XZ7 Gm43736-201ENSMUST00000196377 2281 ntBASIC6.3□□□□□ -1.4
Pcdhb3Q91XZ7 Dnal1-202ENSMUST00000123491 5727 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
Pcdhb3Q91XZ7 D330045A20Rik-202ENSMUST00000113030 3736 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 97.4 ms