Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Gm14905-201ENSMUST00000122351 639 ntBASIC3.85□□□□□ -1.79
Lsm1Q8VC85 Gm2165-201ENSMUST00000124609 1118 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
Lsm1Q8VC85 Gm11216-201ENSMUST00000125240 354 ntTSL 5 BASIC3.85□□□□□ -1.79
Lsm1Q8VC85 Gm14553-201ENSMUST00000126711 1118 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
Lsm1Q8VC85 Gm15949-201ENSMUST00000129485 126 ntTSL 3 BASIC3.85□□□□□ -1.79
Lsm1Q8VC85 Gm2101-204ENSMUST00000137421 1118 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
Lsm1Q8VC85 Gm3669-205ENSMUST00000144018 1118 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
Lsm1Q8VC85 Tpo-203ENSMUST00000155263 664 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
Lsm1Q8VC85 Gm24444-201ENSMUST00000157244 308 ntBASIC3.85□□□□□ -1.79
Lsm1Q8VC85 Ppp1r2-ps9-201ENSMUST00000173100 549 ntBASIC3.85□□□□□ -1.79
Lsm1Q8VC85 Malat1-202ENSMUST00000173314 556 ntTSL 3 BASIC3.85□□□□□ -1.79
Lsm1Q8VC85 Mir6996-201ENSMUST00000183922 61 ntBASIC3.85□□□□□ -1.79
Lsm1Q8VC85 Mir6938-201ENSMUST00000184173 63 ntBASIC3.85□□□□□ -1.79
Lsm1Q8VC85 Gm27286-201ENSMUST00000184934 179 ntBASIC3.85□□□□□ -1.79
Lsm1Q8VC85 1700057G04Rik-206ENSMUST00000185580 842 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
Lsm1Q8VC85 Gm28396-201ENSMUST00000190309 379 ntBASIC3.85□□□□□ -1.79
Lsm1Q8VC85 Gm38045-201ENSMUST00000193536 199 ntTSL 5 BASIC3.85□□□□□ -1.79
Lsm1Q8VC85 Gm37836-201ENSMUST00000195875 175 ntBASIC3.85□□□□□ -1.79
Lsm1Q8VC85 Cyp3a63-ps-201ENSMUST00000196626 1170 ntBASIC3.85□□□□□ -1.79
Lsm1Q8VC85 Gm32780-201ENSMUST00000201402 540 ntTSL 3 BASIC3.85□□□□□ -1.79
Lsm1Q8VC85 Gm8035-201ENSMUST00000204625 687 ntBASIC3.85□□□□□ -1.79
Lsm1Q8VC85 Gm44259-201ENSMUST00000204996 298 ntBASIC3.85□□□□□ -1.79
Lsm1Q8VC85 Gm17820-201ENSMUST00000220213 1068 ntBASIC3.85□□□□□ -1.79
Lsm1Q8VC85 Eif1-ps2-201ENSMUST00000221990 339 ntBASIC3.85□□□□□ -1.79
Lsm1Q8VC85 AC158536.1-201ENSMUST00000222510 256 ntBASIC3.85□□□□□ -1.79
Lsm1Q8VC85 AC154838.2-201ENSMUST00000226602 747 ntBASIC3.85□□□□□ -1.79
Lsm1Q8VC85 Olfr205-201ENSMUST00000074125 990 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
Lsm1Q8VC85 Tas2r110-201ENSMUST00000082014 1002 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
Lsm1Q8VC85 Olfr1029-201ENSMUST00000082191 1061 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
Lsm1Q8VC85 Mir383-201ENSMUST00000083523 70 ntBASIC3.85□□□□□ -1.79
Lsm1Q8VC85 Gm22350-201ENSMUST00000083924 156 ntBASIC3.85□□□□□ -1.79
Lsm1Q8VC85 Wdr49-203ENSMUST00000204341 1344 ntTSL 5 BASIC3.85□□□□□ -1.79
Lsm1Q8VC85 Obscn-203ENSMUST00000052872 23006 ntTSL 5 BASIC3.85□□□□□ -1.79
Lsm1Q8VC85 Gm27162-201ENSMUST00000185169 2478 ntTSL 2 BASIC3.85□□□□□ -1.79
Lsm1Q8VC85 Cfap97-206ENSMUST00000164504 4521 ntAPPRIS P2 TSL 1 (best) BASIC3.85□□□□□ -1.79
Lsm1Q8VC85 Spata31d1c-201ENSMUST00000099427 3390 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
Lsm1Q8VC85 Olfr1323-203ENSMUST00000213556 5431 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
Lsm1Q8VC85 Cdc27-203ENSMUST00000106962 3160 ntTSL 5 BASIC3.84□□□□□ -1.79
Lsm1Q8VC85 Fam19a1-202ENSMUST00000122120 3252 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
Lsm1Q8VC85 Gm14062-201ENSMUST00000134795 4134 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
Lsm1Q8VC85 Gm13762-201ENSMUST00000144908 2612 ntAPPRIS P1 TSL 3 BASIC3.84□□□□□ -1.79
Lsm1Q8VC85 4930415L06Rik-201ENSMUST00000088146 2617 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
Lsm1Q8VC85 Mgat4c-212ENSMUST00000179929 4272 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
Lsm1Q8VC85 Gm24544-201ENSMUST00000103862 110 ntBASIC3.84□□□□□ -1.79
Lsm1Q8VC85 Gm14816-201ENSMUST00000117174 294 ntBASIC3.84□□□□□ -1.79
Lsm1Q8VC85 Gm11874-201ENSMUST00000117437 130 ntBASIC3.84□□□□□ -1.79
Lsm1Q8VC85 Gm14119-201ENSMUST00000119511 235 ntBASIC3.84□□□□□ -1.79
Lsm1Q8VC85 Gm26036-201ENSMUST00000158149 144 ntBASIC3.84□□□□□ -1.79
Lsm1Q8VC85 Mir6391-201ENSMUST00000184391 104 ntBASIC3.84□□□□□ -1.79
Lsm1Q8VC85 Vmn2r-ps149-201ENSMUST00000188423 590 ntBASIC3.84□□□□□ -1.79
Lsm1Q8VC85 Gm28997-201ENSMUST00000188759 429 ntBASIC3.84□□□□□ -1.79
Lsm1Q8VC85 4930478M09Rik-201ENSMUST00000201366 1113 ntBASIC3.84□□□□□ -1.79
Lsm1Q8VC85 Gm2516-201ENSMUST00000210011 954 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
Lsm1Q8VC85 Gm18487-201ENSMUST00000215826 878 ntBASIC3.84□□□□□ -1.79
Lsm1Q8VC85 CT009754.1-201ENSMUST00000223489 558 ntTSL 3 BASIC3.84□□□□□ -1.79
Lsm1Q8VC85 AC168059.1-201ENSMUST00000225846 841 ntBASIC3.84□□□□□ -1.79
Lsm1Q8VC85 Olfr147-201ENSMUST00000056364 1166 ntAPPRIS P2 TSL 2 BASIC3.84□□□□□ -1.79
Lsm1Q8VC85 Ssxb3-202ENSMUST00000089379 604 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
Lsm1Q8VC85 Olfr1253-201ENSMUST00000099765 957 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
Lsm1Q8VC85 Zfp131-201ENSMUST00000177916 3067 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
Lsm1Q8VC85 Hsfy2-201ENSMUST00000062085 1392 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
Lsm1Q8VC85 Gm43886-201ENSMUST00000205039 2386 ntBASIC3.84□□□□□ -1.79
Lsm1Q8VC85 Olfr1408-202ENSMUST00000200689 3453 ntAPPRIS P1 TSL 3 BASIC3.84□□□□□ -1.8
Lsm1Q8VC85 Obox1-201ENSMUST00000067288 1512 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
Lsm1Q8VC85 Slc22a30-203ENSMUST00000120540 2598 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
Lsm1Q8VC85 Gm3972-201ENSMUST00000173960 2861 ntBASIC3.84□□□□□ -1.8
Lsm1Q8VC85 Pde1a-205ENSMUST00000102654 4122 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.8
Lsm1Q8VC85 Arhgap12-205ENSMUST00000182066 4506 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
Lsm1Q8VC85 Gm42484-201ENSMUST00000196075 2104 ntBASIC3.83□□□□□ -1.8
Lsm1Q8VC85 Nap1l1-202ENSMUST00000171797 3926 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Lsm1Q8VC85 Nap1l1-204ENSMUST00000218828 3934 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
Lsm1Q8VC85 Gm37792-201ENSMUST00000195761 3413 ntBASIC3.83□□□□□ -1.8
Lsm1Q8VC85 Olfr824-203ENSMUST00000215217 3619 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
Lsm1Q8VC85 AC153150.1-201ENSMUST00000226065 3782 ntBASIC3.83□□□□□ -1.8
Lsm1Q8VC85 Gm22778-201ENSMUST00000104090 128 ntBASIC3.83□□□□□ -1.8
Lsm1Q8VC85 Snora64-201ENSMUST00000104521 134 ntBASIC3.83□□□□□ -1.8
Lsm1Q8VC85 Gm12466-201ENSMUST00000121199 620 ntBASIC3.83□□□□□ -1.8
Lsm1Q8VC85 Cyp2j7-ps3-201ENSMUST00000121405 206 ntBASIC3.83□□□□□ -1.8
Lsm1Q8VC85 Gm25603-201ENSMUST00000158361 105 ntBASIC3.83□□□□□ -1.8
Lsm1Q8VC85 Gm23198-201ENSMUST00000158811 91 ntBASIC3.83□□□□□ -1.8
Lsm1Q8VC85 Gm9890-201ENSMUST00000171867 537 ntBASIC3.83□□□□□ -1.8
Lsm1Q8VC85 Fam107b-206ENSMUST00000176254 300 ntTSL 5 BASIC3.83□□□□□ -1.8
Lsm1Q8VC85 9430065F17Rik-202ENSMUST00000180908 1084 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Lsm1Q8VC85 Scgb2b17-203ENSMUST00000182673 434 ntAPPRIS P2 TSL 2 BASIC3.83□□□□□ -1.8
Lsm1Q8VC85 Scgb2b15-201ENSMUST00000182975 434 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
Lsm1Q8VC85 A930005H10Rik-202ENSMUST00000185424 433 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Lsm1Q8VC85 Gm37934-201ENSMUST00000192902 402 ntBASIC3.83□□□□□ -1.8
Lsm1Q8VC85 Gm38334-201ENSMUST00000195060 313 ntBASIC3.83□□□□□ -1.8
Lsm1Q8VC85 Gm10445-201ENSMUST00000203521 762 ntTSL 2 BASIC3.83□□□□□ -1.8
Lsm1Q8VC85 Gm45604-201ENSMUST00000209665 550 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Lsm1Q8VC85 AC163721.1-201ENSMUST00000222669 394 ntTSL 3 BASIC3.83□□□□□ -1.8
Lsm1Q8VC85 AC133517.1-202ENSMUST00000224409 233 ntBASIC3.83□□□□□ -1.8
Lsm1Q8VC85 AC166095.1-203ENSMUST00000224591 233 ntBASIC3.83□□□□□ -1.8
Lsm1Q8VC85 Vmn1r2-202ENSMUST00000226198 1126 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
Lsm1Q8VC85 Olfr969-201ENSMUST00000074566 936 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
Lsm1Q8VC85 Olfr1148-201ENSMUST00000077580 945 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
Lsm1Q8VC85 Mir134-201ENSMUST00000083492 71 ntBASIC3.83□□□□□ -1.8
Lsm1Q8VC85 Olfr725-202ENSMUST00000206920 1519 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
Lsm1Q8VC85 Tex47-203ENSMUST00000160634 2881 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
Lsm1Q8VC85 Cdh7-201ENSMUST00000027542 3390 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 104.3 ms