Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Cntn6-202ENSMUST00000161070 3515 ntTSL 5 BASIC5.37□□□□□ -1.55
Ccdc9Q8VC31 Trpc5os-202ENSMUST00000178233 3515 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Ccdc9Q8VC31 Gm17146-201ENSMUST00000108464 372 ntTSL 3 BASIC5.37□□□□□ -1.55
Ccdc9Q8VC31 Olfr1146-ps1-201ENSMUST00000117180 943 ntBASIC5.37□□□□□ -1.55
Ccdc9Q8VC31 Gm15090-201ENSMUST00000118787 1196 ntBASIC5.37□□□□□ -1.55
Ccdc9Q8VC31 Gm16106-201ENSMUST00000119187 294 ntBASIC5.37□□□□□ -1.55
Ccdc9Q8VC31 Gm13488-201ENSMUST00000120419 179 ntBASIC5.37□□□□□ -1.55
Ccdc9Q8VC31 Gm15089-201ENSMUST00000122332 1196 ntBASIC5.37□□□□□ -1.55
Ccdc9Q8VC31 Olfr1134-202ENSMUST00000135875 1291 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Ccdc9Q8VC31 Gm25557-201ENSMUST00000158084 315 ntBASIC5.37□□□□□ -1.55
Ccdc9Q8VC31 Gm22261-201ENSMUST00000158691 324 ntBASIC5.37□□□□□ -1.55
Ccdc9Q8VC31 Gm7281-201ENSMUST00000160010 543 ntBASIC5.37□□□□□ -1.55
Ccdc9Q8VC31 Eif3s6-ps2-201ENSMUST00000163304 219 ntBASIC5.37□□□□□ -1.55
Ccdc9Q8VC31 Gm3727-201ENSMUST00000168458 995 ntAPPRIS P5 TSL 5 BASIC5.37□□□□□ -1.55
Ccdc9Q8VC31 Vmn1r-ps85-201ENSMUST00000173029 890 ntBASIC5.37□□□□□ -1.55
Ccdc9Q8VC31 Gm18396-201ENSMUST00000177095 361 ntBASIC5.37□□□□□ -1.55
Ccdc9Q8VC31 Gm7656-201ENSMUST00000182468 1004 ntBASIC5.37□□□□□ -1.55
Ccdc9Q8VC31 9130024F11Rik-203ENSMUST00000187858 447 ntTSL 2 BASIC5.37□□□□□ -1.55
Ccdc9Q8VC31 Gm34176-201ENSMUST00000192621 474 ntBASIC5.37□□□□□ -1.55
Ccdc9Q8VC31 Gm9442-201ENSMUST00000194242 319 ntBASIC5.37□□□□□ -1.55
Ccdc9Q8VC31 Csn1s2a-202ENSMUST00000196585 762 ntAPPRIS ALT2 TSL 3 BASIC5.37□□□□□ -1.55
Ccdc9Q8VC31 Gm43967-201ENSMUST00000203787 301 ntBASIC5.37□□□□□ -1.55
Ccdc9Q8VC31 Gm6303-201ENSMUST00000210123 471 ntBASIC5.37□□□□□ -1.55
Ccdc9Q8VC31 Cwc15-202ENSMUST00000213913 831 ntAPPRIS P1 TSL 3 BASIC5.37□□□□□ -1.55
Ccdc9Q8VC31 AL929417.1-201ENSMUST00000214901 124 ntBASIC5.37□□□□□ -1.55
Ccdc9Q8VC31 Gm18441-201ENSMUST00000223539 617 ntBASIC5.37□□□□□ -1.55
Ccdc9Q8VC31 AC154576.2-203ENSMUST00000224736 253 ntBASIC5.37□□□□□ -1.55
Ccdc9Q8VC31 AC154692.1-201ENSMUST00000228314 544 ntBASIC5.37□□□□□ -1.55
Ccdc9Q8VC31 AC114916.1-201ENSMUST00000228465 494 ntBASIC5.37□□□□□ -1.55
Ccdc9Q8VC31 AC164437.2-201ENSMUST00000228915 797 ntBASIC5.37□□□□□ -1.55
Ccdc9Q8VC31 Csn1s2a-201ENSMUST00000076379 920 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
Ccdc9Q8VC31 Gm23510-201ENSMUST00000083083 163 ntBASIC5.37□□□□□ -1.55
Ccdc9Q8VC31 Gm23459-201ENSMUST00000083259 131 ntBASIC5.37□□□□□ -1.55
Ccdc9Q8VC31 Gm24319-201ENSMUST00000083389 107 ntBASIC5.37□□□□□ -1.55
Ccdc9Q8VC31 Olfr593-201ENSMUST00000098206 984 ntAPPRIS P2 BASIC5.37□□□□□ -1.55
Ccdc9Q8VC31 Olfr1141-201ENSMUST00000099846 936 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Ccdc9Q8VC31 Olfr1134-201ENSMUST00000099857 1102 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
Ccdc9Q8VC31 AC134860.3-201ENSMUST00000223564 1300 ntBASIC5.37□□□□□ -1.55
Ccdc9Q8VC31 Olfr714-203ENSMUST00000214429 4324 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Ccdc9Q8VC31 Adgrg2-201ENSMUST00000112398 3418 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
Ccdc9Q8VC31 Gm37478-201ENSMUST00000193624 3495 ntBASIC5.37□□□□□ -1.55
Ccdc9Q8VC31 Gm6639-202ENSMUST00000196841 2666 ntTSL 5 BASIC5.37□□□□□ -1.55
Ccdc9Q8VC31 Neurod4-201ENSMUST00000061571 3345 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Ccdc9Q8VC31 Olfr873-205ENSMUST00000215540 3784 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
Ccdc9Q8VC31 AC112142.1-203ENSMUST00000228670 2472 ntBASIC5.36□□□□□ -1.55
Ccdc9Q8VC31 Zfp950-207ENSMUST00000180544 2568 ntAPPRIS P1 TSL 3 BASIC5.36□□□□□ -1.55
Ccdc9Q8VC31 Vmn1r84-205ENSMUST00000228653 2769 ntAPPRIS ALT2 BASIC5.36□□□□□ -1.55
Ccdc9Q8VC31 Rbbp8-202ENSMUST00000115861 3523 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Ccdc9Q8VC31 Gm12062-201ENSMUST00000117533 259 ntBASIC5.36□□□□□ -1.55
Ccdc9Q8VC31 Gm15766-201ENSMUST00000118025 813 ntBASIC5.36□□□□□ -1.55
Ccdc9Q8VC31 Gm14554-201ENSMUST00000119548 661 ntBASIC5.36□□□□□ -1.55
Ccdc9Q8VC31 Gm11991-201ENSMUST00000119652 1074 ntBASIC5.36□□□□□ -1.55
Ccdc9Q8VC31 Gm14288-202ENSMUST00000123863 267 ntAPPRIS ALT2 TSL 2 BASIC5.36□□□□□ -1.55
Ccdc9Q8VC31 Gm11917-201ENSMUST00000154813 373 ntTSL 2 BASIC5.36□□□□□ -1.55
Ccdc9Q8VC31 Gm22725-201ENSMUST00000158092 110 ntBASIC5.36□□□□□ -1.55
Ccdc9Q8VC31 Gm10319-202ENSMUST00000159439 846 ntBASIC5.36□□□□□ -1.55
Ccdc9Q8VC31 Gm16026-202ENSMUST00000159695 772 ntBASIC5.36□□□□□ -1.55
Ccdc9Q8VC31 Gm18588-201ENSMUST00000177308 492 ntBASIC5.36□□□□□ -1.55
Ccdc9Q8VC31 Prl-201ENSMUST00000018061 886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
Ccdc9Q8VC31 Gm27153-201ENSMUST00000184492 407 ntTSL 2 BASIC5.36□□□□□ -1.55
Ccdc9Q8VC31 Gm28935-201ENSMUST00000185737 568 ntTSL 2 BASIC5.36□□□□□ -1.55
Ccdc9Q8VC31 Galntl6-205ENSMUST00000188531 1056 ntTSL 5 BASIC5.36□□□□□ -1.55
Ccdc9Q8VC31 Gm37438-201ENSMUST00000192813 393 ntBASIC5.36□□□□□ -1.55
Ccdc9Q8VC31 Gm38356-201ENSMUST00000194313 408 ntBASIC5.36□□□□□ -1.55
Ccdc9Q8VC31 Gm43765-201ENSMUST00000196303 893 ntBASIC5.36□□□□□ -1.55
Ccdc9Q8VC31 Gm43724-201ENSMUST00000197516 226 ntBASIC5.36□□□□□ -1.55
Ccdc9Q8VC31 Gm43301-201ENSMUST00000198918 778 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Ccdc9Q8VC31 Gm44776-201ENSMUST00000207212 381 ntBASIC5.36□□□□□ -1.55
Ccdc9Q8VC31 Gm18904-201ENSMUST00000218756 329 ntBASIC5.36□□□□□ -1.55
Ccdc9Q8VC31 AC139754.1-201ENSMUST00000219418 950 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Ccdc9Q8VC31 AC154636.3-201ENSMUST00000221489 1214 ntBASIC5.36□□□□□ -1.55
Ccdc9Q8VC31 AC160756.1-201ENSMUST00000227266 235 ntBASIC5.36□□□□□ -1.55
Ccdc9Q8VC31 1110012L19Rik-201ENSMUST00000053981 1094 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Ccdc9Q8VC31 Olfr583-201ENSMUST00000098211 960 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Ccdc9Q8VC31 Gm7869-201ENSMUST00000121457 1322 ntBASIC5.36□□□□□ -1.55
Ccdc9Q8VC31 Zfp595-203ENSMUST00000168892 4040 ntAPPRIS P2 TSL 1 (best) BASIC5.36□□□□□ -1.55
Ccdc9Q8VC31 Gm43059-201ENSMUST00000202437 1388 ntBASIC5.36□□□□□ -1.55
Ccdc9Q8VC31 AC124426.1-203ENSMUST00000221814 1362 ntBASIC5.36□□□□□ -1.55
Ccdc9Q8VC31 Pax6os1-202ENSMUST00000149133 1464 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Ccdc9Q8VC31 Gm43376-202ENSMUST00000199747 1743 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Ccdc9Q8VC31 Slc22a30-203ENSMUST00000120540 2598 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Ccdc9Q8VC31 Inpp4b-201ENSMUST00000042529 4120 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
Ccdc9Q8VC31 Olfr1326-ps1-201ENSMUST00000059880 3637 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Ccdc9Q8VC31 Gm38057-201ENSMUST00000195551 3203 ntBASIC5.35□□□□□ -1.55
Ccdc9Q8VC31 Gm42876-201ENSMUST00000196989 3215 ntBASIC5.35□□□□□ -1.55
Ccdc9Q8VC31 Syne2-210ENSMUST00000143031 21704 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
Ccdc9Q8VC31 Gm45848-201ENSMUST00000212932 1871 ntTSL 5 BASIC5.35□□□□□ -1.55
Ccdc9Q8VC31 Obox5-201ENSMUST00000098802 1831 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Ccdc9Q8VC31 AC121997.2-203ENSMUST00000228613 4192 ntBASIC5.35□□□□□ -1.55
Ccdc9Q8VC31 Klra10-201ENSMUST00000112020 823 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Ccdc9Q8VC31 Gm13132-201ENSMUST00000121194 472 ntBASIC5.35□□□□□ -1.55
Ccdc9Q8VC31 Gm16471-201ENSMUST00000121940 618 ntBASIC5.35□□□□□ -1.55
Ccdc9Q8VC31 Gm25293-201ENSMUST00000122792 285 ntBASIC5.35□□□□□ -1.55
Ccdc9Q8VC31 Gm23231-201ENSMUST00000157299 104 ntBASIC5.35□□□□□ -1.55
Ccdc9Q8VC31 Gm22226-201ENSMUST00000157355 109 ntBASIC5.35□□□□□ -1.55
Ccdc9Q8VC31 Gm25906-201ENSMUST00000158489 126 ntBASIC5.35□□□□□ -1.55
Ccdc9Q8VC31 Gm16243-201ENSMUST00000160351 494 ntTSL 3 BASIC5.35□□□□□ -1.55
Ccdc9Q8VC31 Ear-ps9-201ENSMUST00000161963 460 ntBASIC5.35□□□□□ -1.55
Ccdc9Q8VC31 Gm17160-201ENSMUST00000170645 260 ntTSL 3 BASIC5.35□□□□□ -1.55
Ccdc9Q8VC31 Gm9890-201ENSMUST00000171867 537 ntBASIC5.35□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 81.2 ms