Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 Gm13686-201ENSMUST00000122851 350 ntTSL 3 BASIC5.18□□□□□ -1.58
Syne4Q8CII8 Gm15533-201ENSMUST00000126205 465 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Syne4Q8CII8 Gm9785-202ENSMUST00000144563 593 ntBASIC5.18□□□□□ -1.58
Syne4Q8CII8 Gm24477-201ENSMUST00000157438 103 ntBASIC5.18□□□□□ -1.58
Syne4Q8CII8 Gm25846-201ENSMUST00000158013 135 ntBASIC5.18□□□□□ -1.58
Syne4Q8CII8 Prl3d2-202ENSMUST00000164964 675 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
Syne4Q8CII8 Gm38393-201ENSMUST00000179360 1199 ntAPPRIS P5 TSL 5 BASIC5.18□□□□□ -1.58
Syne4Q8CII8 Mir6537-201ENSMUST00000184150 110 ntBASIC5.18□□□□□ -1.58
Syne4Q8CII8 Mir7047-201ENSMUST00000184595 64 ntBASIC5.18□□□□□ -1.58
Syne4Q8CII8 Gm21117-202ENSMUST00000185327 925 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Syne4Q8CII8 Gm29405-201ENSMUST00000187204 370 ntTSL 5 BASIC5.18□□□□□ -1.58
Syne4Q8CII8 Gm29557-201ENSMUST00000188245 370 ntTSL 5 BASIC5.18□□□□□ -1.58
Syne4Q8CII8 Gm28174-201ENSMUST00000191003 370 ntTSL 5 BASIC5.18□□□□□ -1.58
Syne4Q8CII8 Ikzf2-209ENSMUST00000191262 1146 ntTSL 5 BASIC5.18□□□□□ -1.58
Syne4Q8CII8 Gm20843-202ENSMUST00000191305 925 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Syne4Q8CII8 Gm7897-201ENSMUST00000193981 554 ntBASIC5.18□□□□□ -1.58
Syne4Q8CII8 1700063I16Rik-201ENSMUST00000194611 611 ntBASIC5.18□□□□□ -1.58
Syne4Q8CII8 Gm44054-201ENSMUST00000203814 372 ntBASIC5.18□□□□□ -1.58
Syne4Q8CII8 Gm2522-201ENSMUST00000204280 322 ntBASIC5.18□□□□□ -1.58
Syne4Q8CII8 Gm44174-201ENSMUST00000205022 141 ntTSL 2 BASIC5.18□□□□□ -1.58
Syne4Q8CII8 Mir670hg-207ENSMUST00000211619 819 ntTSL 5 BASIC5.18□□□□□ -1.58
Syne4Q8CII8 Olfr879-ps1-201ENSMUST00000212455 694 ntBASIC5.18□□□□□ -1.58
Syne4Q8CII8 Gm30409-201ENSMUST00000223302 229 ntTSL 3 BASIC5.18□□□□□ -1.58
Syne4Q8CII8 AC124524.2-201ENSMUST00000223940 588 ntBASIC5.18□□□□□ -1.58
Syne4Q8CII8 AC122448.1-201ENSMUST00000226317 772 ntBASIC5.18□□□□□ -1.58
Syne4Q8CII8 Cox7b2-201ENSMUST00000050129 542 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Syne4Q8CII8 Gm9964-201ENSMUST00000068448 728 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Syne4Q8CII8 Vmn1r229-201ENSMUST00000076759 921 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Syne4Q8CII8 Gm22864-201ENSMUST00000083950 130 ntBASIC5.18□□□□□ -1.58
Syne4Q8CII8 Gabra3-202ENSMUST00000114554 1790 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
Syne4Q8CII8 Bmp15-201ENSMUST00000024049 3060 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Syne4Q8CII8 Gm3563-201ENSMUST00000172963 1628 ntBASIC5.18□□□□□ -1.58
Syne4Q8CII8 Vmn1r185-209ENSMUST00000228133 5749 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Syne4Q8CII8 Gm7646-201ENSMUST00000198590 1346 ntBASIC5.18□□□□□ -1.58
Syne4Q8CII8 AI987944-201ENSMUST00000071804 2671 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
Syne4Q8CII8 Olfr1043-202ENSMUST00000213886 1675 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Syne4Q8CII8 Olfr147-202ENSMUST00000214648 5356 ntAPPRIS ALT2 TSL 2 BASIC5.18□□□□□ -1.58
Syne4Q8CII8 Slc22a28-201ENSMUST00000065651 2004 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Syne4Q8CII8 Impg1-201ENSMUST00000085289 3356 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
Syne4Q8CII8 Olfr985-202ENSMUST00000214981 1879 ntAPPRIS P1 TSL 3 BASIC5.17□□□□□ -1.58
Syne4Q8CII8 Stag2-202ENSMUST00000115072 5955 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Syne4Q8CII8 Olfr1355-201ENSMUST00000078414 3317 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
Syne4Q8CII8 Abca13-201ENSMUST00000042740 16011 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Syne4Q8CII8 Gm43871-201ENSMUST00000204931 1955 ntBASIC5.17□□□□□ -1.58
Syne4Q8CII8 Olfr1183-201ENSMUST00000102618 912 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Syne4Q8CII8 Gm17146-201ENSMUST00000108464 372 ntTSL 3 BASIC5.17□□□□□ -1.58
Syne4Q8CII8 Gm12683-201ENSMUST00000117528 415 ntBASIC5.17□□□□□ -1.58
Syne4Q8CII8 Gm13567-201ENSMUST00000118026 247 ntBASIC5.17□□□□□ -1.58
Syne4Q8CII8 Gimap4-204ENSMUST00000119575 900 ntTSL 3 BASIC5.17□□□□□ -1.58
Syne4Q8CII8 Gm11407-201ENSMUST00000120362 1058 ntBASIC5.17□□□□□ -1.58
Syne4Q8CII8 Gm12096-201ENSMUST00000121149 829 ntBASIC5.17□□□□□ -1.58
Syne4Q8CII8 Gm16412-201ENSMUST00000121602 273 ntBASIC5.17□□□□□ -1.58
Syne4Q8CII8 Gm11931-201ENSMUST00000121630 447 ntBASIC5.17□□□□□ -1.58
Syne4Q8CII8 Amy2a1-201ENSMUST00000132353 890 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
Syne4Q8CII8 Gm16363-201ENSMUST00000132460 877 ntBASIC5.17□□□□□ -1.58
Syne4Q8CII8 Gm11775-201ENSMUST00000136500 773 ntTSL 5 BASIC5.17□□□□□ -1.58
Syne4Q8CII8 Gm12724-201ENSMUST00000140196 665 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Syne4Q8CII8 Igfl3-201ENSMUST00000152973 575 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Syne4Q8CII8 Gm26401-201ENSMUST00000158502 76 ntBASIC5.17□□□□□ -1.58
Syne4Q8CII8 Gm10177-202ENSMUST00000161698 207 ntBASIC5.17□□□□□ -1.58
Syne4Q8CII8 Spanxn4-201ENSMUST00000172433 424 ntBASIC5.17□□□□□ -1.58
Syne4Q8CII8 Vmn2r-ps59-201ENSMUST00000174596 135 ntBASIC5.17□□□□□ -1.58
Syne4Q8CII8 Vmn1r23-201ENSMUST00000175817 997 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Syne4Q8CII8 Gm26870-202ENSMUST00000181572 1143 ntTSL 5 BASIC5.17□□□□□ -1.58
Syne4Q8CII8 Gm36974-201ENSMUST00000194200 1071 ntBASIC5.17□□□□□ -1.58
Syne4Q8CII8 2900037B21Rik-201ENSMUST00000194352 337 ntBASIC5.17□□□□□ -1.58
Syne4Q8CII8 Gm44404-201ENSMUST00000203979 636 ntBASIC5.17□□□□□ -1.58
Syne4Q8CII8 Gm44817-201ENSMUST00000205416 453 ntBASIC5.17□□□□□ -1.58
Syne4Q8CII8 Gm45409-201ENSMUST00000211486 252 ntBASIC5.17□□□□□ -1.58
Syne4Q8CII8 AC153382.1-201ENSMUST00000217953 1007 ntTSL 5 BASIC5.17□□□□□ -1.58
Syne4Q8CII8 Gm30034-201ENSMUST00000219589 248 ntTSL 5 BASIC5.17□□□□□ -1.58
Syne4Q8CII8 Vmn1r89-206ENSMUST00000227319 985 ntBASIC5.17□□□□□ -1.58
Syne4Q8CII8 CT025525.2-201ENSMUST00000227743 423 ntBASIC5.17□□□□□ -1.58
Syne4Q8CII8 Olfr39-201ENSMUST00000071725 1098 ntTSL 2 BASIC5.17□□□□□ -1.58
Syne4Q8CII8 Olfr1109-201ENSMUST00000099863 939 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Syne4Q8CII8 Gm43831-201ENSMUST00000200461 2598 ntBASIC5.17□□□□□ -1.58
Syne4Q8CII8 AC168274.1-201ENSMUST00000218657 1864 ntTSL 5 BASIC5.17□□□□□ -1.58
Syne4Q8CII8 Gm43201-201ENSMUST00000195925 3416 ntBASIC5.17□□□□□ -1.58
Syne4Q8CII8 Zan-204ENSMUST00000164178 16451 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Syne4Q8CII8 Olfr535-207ENSMUST00000217235 5186 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Syne4Q8CII8 Nxt2-202ENSMUST00000112913 2538 ntTSL 3 BASIC5.17□□□□□ -1.58
Syne4Q8CII8 Gm29325-201ENSMUST00000190705 2528 ntBASIC5.17□□□□□ -1.58
Syne4Q8CII8 Klhl15-204ENSMUST00000113915 6241 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Syne4Q8CII8 Olfr685-204ENSMUST00000217432 3246 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
Syne4Q8CII8 Olfr1034-201ENSMUST00000213496 4882 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Syne4Q8CII8 Dcun1d1-203ENSMUST00000178098 4434 ntTSL 5 BASIC5.16□□□□□ -1.58
Syne4Q8CII8 Gm11874-201ENSMUST00000117437 130 ntBASIC5.16□□□□□ -1.58
Syne4Q8CII8 Gm14365-201ENSMUST00000117535 587 ntBASIC5.16□□□□□ -1.58
Syne4Q8CII8 Ccnb2-ps-201ENSMUST00000118290 623 ntBASIC5.16□□□□□ -1.58
Syne4Q8CII8 Gm12873-201ENSMUST00000119988 422 ntBASIC5.16□□□□□ -1.58
Syne4Q8CII8 Gm16100-201ENSMUST00000120489 231 ntBASIC5.16□□□□□ -1.58
Syne4Q8CII8 Gm12708-201ENSMUST00000126143 349 ntTSL 5 BASIC5.16□□□□□ -1.58
Syne4Q8CII8 Gm22794-201ENSMUST00000157228 306 ntBASIC5.16□□□□□ -1.58
Syne4Q8CII8 Gm23754-201ENSMUST00000157576 63 ntBASIC5.16□□□□□ -1.58
Syne4Q8CII8 Gm4675-201ENSMUST00000163396 502 ntTSL 3 BASIC5.16□□□□□ -1.58
Syne4Q8CII8 Gm6650-201ENSMUST00000166710 614 ntBASIC5.16□□□□□ -1.58
Syne4Q8CII8 Gm20648-201ENSMUST00000175815 328 ntBASIC5.16□□□□□ -1.58
Syne4Q8CII8 Gm21732-201ENSMUST00000179309 1083 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Syne4Q8CII8 Gm21773-201ENSMUST00000179355 1083 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Syne4Q8CII8 Gm21921-201ENSMUST00000180040 1083 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 133.9 ms