Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 Postn-204ENSMUST00000117373 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
CopaQ8CIE6 Gm23948-201ENSMUST00000104030 132 ntBASIC4.9□□□□□ -1.63
CopaQ8CIE6 Olfr328-202ENSMUST00000108824 1199 ntAPPRIS P1 TSL 3 BASIC4.9□□□□□ -1.63
CopaQ8CIE6 Gm25509-201ENSMUST00000116985 106 ntBASIC4.9□□□□□ -1.63
CopaQ8CIE6 Gm15076-201ENSMUST00000117076 474 ntBASIC4.9□□□□□ -1.63
CopaQ8CIE6 Gm4596-201ENSMUST00000117197 442 ntBASIC4.9□□□□□ -1.63
CopaQ8CIE6 Mup-ps18-201ENSMUST00000120145 531 ntBASIC4.9□□□□□ -1.63
CopaQ8CIE6 Gm14927-201ENSMUST00000120283 454 ntBASIC4.9□□□□□ -1.63
CopaQ8CIE6 2610024D14Rik-201ENSMUST00000121233 294 ntBASIC4.9□□□□□ -1.63
CopaQ8CIE6 Gm15643-201ENSMUST00000126556 383 ntTSL 3 BASIC4.9□□□□□ -1.63
CopaQ8CIE6 Gm3362-201ENSMUST00000148102 466 ntBASIC4.9□□□□□ -1.63
CopaQ8CIE6 Gm24664-201ENSMUST00000158939 100 ntBASIC4.9□□□□□ -1.63
CopaQ8CIE6 Gm23059-201ENSMUST00000158978 107 ntBASIC4.9□□□□□ -1.63
CopaQ8CIE6 Plgrkt-201ENSMUST00000016639 1012 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
CopaQ8CIE6 Gm6647-201ENSMUST00000170514 641 ntBASIC4.9□□□□□ -1.63
CopaQ8CIE6 Cox6b2-202ENSMUST00000182048 465 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
CopaQ8CIE6 Gm27342-201ENSMUST00000183530 109 ntBASIC4.9□□□□□ -1.63
CopaQ8CIE6 Mir7028-201ENSMUST00000185016 64 ntBASIC4.9□□□□□ -1.63
CopaQ8CIE6 Gm29191-201ENSMUST00000185427 621 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
CopaQ8CIE6 Gm29426-202ENSMUST00000186564 536 ntTSL 5 BASIC4.9□□□□□ -1.63
CopaQ8CIE6 Gm29668-201ENSMUST00000187802 315 ntBASIC4.9□□□□□ -1.63
CopaQ8CIE6 Gm28113-201ENSMUST00000188280 229 ntBASIC4.9□□□□□ -1.63
CopaQ8CIE6 Gm28486-201ENSMUST00000188443 621 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
CopaQ8CIE6 Gm29524-201ENSMUST00000190819 699 ntBASIC4.9□□□□□ -1.63
CopaQ8CIE6 Gm38039-201ENSMUST00000195328 443 ntTSL 5 BASIC4.9□□□□□ -1.63
CopaQ8CIE6 Gm44649-201ENSMUST00000205608 364 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
CopaQ8CIE6 4930402F11Rik-202ENSMUST00000207781 1178 ntTSL 5 BASIC4.9□□□□□ -1.63
CopaQ8CIE6 Gm8158-201ENSMUST00000219220 465 ntBASIC4.9□□□□□ -1.63
CopaQ8CIE6 Gm8112-201ENSMUST00000219637 465 ntBASIC4.9□□□□□ -1.63
CopaQ8CIE6 AC158803.3-201ENSMUST00000220024 211 ntBASIC4.9□□□□□ -1.63
CopaQ8CIE6 AC154816.2-201ENSMUST00000221918 372 ntTSL 5 BASIC4.9□□□□□ -1.63
CopaQ8CIE6 Gm9628-201ENSMUST00000222169 725 ntBASIC4.9□□□□□ -1.63
CopaQ8CIE6 AC144733.1-201ENSMUST00000222893 1289 ntBASIC4.9□□□□□ -1.63
CopaQ8CIE6 AC155167.1-201ENSMUST00000228931 614 ntBASIC4.9□□□□□ -1.63
CopaQ8CIE6 Olfr729-201ENSMUST00000061020 972 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
CopaQ8CIE6 Zfp329-201ENSMUST00000072222 6727 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
CopaQ8CIE6 Vmn2r77-201ENSMUST00000164996 2565 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
CopaQ8CIE6 Olfr235-206ENSMUST00000215407 2633 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
CopaQ8CIE6 Fscb-201ENSMUST00000059833 3361 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
CopaQ8CIE6 Prrc2c-210ENSMUST00000182660 11502 ntAPPRIS P2 TSL 5 BASIC4.89□□□□□ -1.63
CopaQ8CIE6 Amy1-201ENSMUST00000067980 1985 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CopaQ8CIE6 Macf1-205ENSMUST00000106220 17608 ntTSL 5 BASIC4.89□□□□□ -1.63
CopaQ8CIE6 Cd180-201ENSMUST00000022124 2650 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CopaQ8CIE6 Igkv11-125-201ENSMUST00000103311 350 ntAPPRIS ALT2 BASIC4.89□□□□□ -1.63
CopaQ8CIE6 Gm22899-201ENSMUST00000104540 131 ntBASIC4.89□□□□□ -1.63
CopaQ8CIE6 Gm14444-201ENSMUST00000109069 919 ntTSL 2 BASIC4.89□□□□□ -1.63
CopaQ8CIE6 Gm3020-201ENSMUST00000112801 450 ntTSL 5 BASIC4.89□□□□□ -1.63
CopaQ8CIE6 Gm13491-201ENSMUST00000118267 235 ntBASIC4.89□□□□□ -1.63
CopaQ8CIE6 Gm12423-201ENSMUST00000118334 135 ntBASIC4.89□□□□□ -1.63
CopaQ8CIE6 Gm11409-201ENSMUST00000118621 403 ntBASIC4.89□□□□□ -1.63
CopaQ8CIE6 Gm16189-201ENSMUST00000123707 997 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CopaQ8CIE6 Rrm2b-203ENSMUST00000137636 900 ntTSL 5 BASIC4.89□□□□□ -1.63
CopaQ8CIE6 Gm6619-201ENSMUST00000159229 608 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CopaQ8CIE6 Reg3d-202ENSMUST00000167492 644 ntTSL 5 BASIC4.89□□□□□ -1.63
CopaQ8CIE6 Gm6155-201ENSMUST00000173735 341 ntBASIC4.89□□□□□ -1.63
CopaQ8CIE6 Gm29484-201ENSMUST00000186067 324 ntBASIC4.89□□□□□ -1.63
CopaQ8CIE6 Gm5268-201ENSMUST00000189212 940 ntBASIC4.89□□□□□ -1.63
CopaQ8CIE6 Ccl12-201ENSMUST00000000194 537 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CopaQ8CIE6 1700052H01Rik-202ENSMUST00000196973 429 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CopaQ8CIE6 AC174780.1-201ENSMUST00000199415 1107 ntBASIC4.89□□□□□ -1.63
CopaQ8CIE6 Gm43384-201ENSMUST00000200569 637 ntBASIC4.89□□□□□ -1.63
CopaQ8CIE6 4930425K10Rik-201ENSMUST00000201190 745 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CopaQ8CIE6 Gm44050-201ENSMUST00000204263 527 ntBASIC4.89□□□□□ -1.63
CopaQ8CIE6 Gm33962-202ENSMUST00000205195 630 ntTSL 5 BASIC4.89□□□□□ -1.63
CopaQ8CIE6 Gm3690-201ENSMUST00000211341 262 ntBASIC4.89□□□□□ -1.63
CopaQ8CIE6 AC137127.3-201ENSMUST00000213340 349 ntBASIC4.89□□□□□ -1.63
CopaQ8CIE6 Fam228b-208ENSMUST00000219898 288 ntAPPRIS ALT2 TSL 3 BASIC4.89□□□□□ -1.63
CopaQ8CIE6 Gm4166-201ENSMUST00000220893 2996 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CopaQ8CIE6 AC125399.1-201ENSMUST00000224236 595 ntBASIC4.89□□□□□ -1.63
CopaQ8CIE6 AC154840.1-201ENSMUST00000225216 408 ntBASIC4.89□□□□□ -1.63
CopaQ8CIE6 AC168881.1-201ENSMUST00000226018 430 ntBASIC4.89□□□□□ -1.63
CopaQ8CIE6 5430401F13Rik-201ENSMUST00000075020 602 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
CopaQ8CIE6 Reg3d-201ENSMUST00000089667 782 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CopaQ8CIE6 Olfr1101-201ENSMUST00000099870 933 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
CopaQ8CIE6 Pnpla8-201ENSMUST00000043082 13507 ntAPPRIS P2 TSL 1 (best) BASIC4.89□□□□□ -1.63
CopaQ8CIE6 Acsm3-205ENSMUST00000106529 3295 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CopaQ8CIE6 Gm40909-202ENSMUST00000223275 5564 ntTSL 5 BASIC4.89□□□□□ -1.63
CopaQ8CIE6 Rgs17-202ENSMUST00000064225 8191 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CopaQ8CIE6 Cnot1-201ENSMUST00000068452 8152 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CopaQ8CIE6 Vmn1r219-203ENSMUST00000227388 7948 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
CopaQ8CIE6 BC051142-201ENSMUST00000078615 1899 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
CopaQ8CIE6 Olfr364-ps1-202ENSMUST00000214905 1914 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
CopaQ8CIE6 Trim30a-201ENSMUST00000076922 3771 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CopaQ8CIE6 Gm45483-201ENSMUST00000209845 1682 ntBASIC4.89□□□□□ -1.63
CopaQ8CIE6 Oxr1-202ENSMUST00000090095 4156 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CopaQ8CIE6 Nlrp4f-204ENSMUST00000221659 3551 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
CopaQ8CIE6 Xirp2-201ENSMUST00000028410 11955 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CopaQ8CIE6 Gm44668-201ENSMUST00000207911 3265 ntBASIC4.89□□□□□ -1.63
CopaQ8CIE6 Gm37652-201ENSMUST00000195290 2095 ntBASIC4.88□□□□□ -1.63
CopaQ8CIE6 Gm45517-201ENSMUST00000209973 2468 ntBASIC4.88□□□□□ -1.63
CopaQ8CIE6 Nfia-204ENSMUST00000107057 8913 ntTSL 5 BASIC4.88□□□□□ -1.63
CopaQ8CIE6 Gm10521-201ENSMUST00000097466 2574 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
CopaQ8CIE6 Foxr2-202ENSMUST00000163801 3072 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
CopaQ8CIE6 Tcrg-C2-201ENSMUST00000103561 914 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
CopaQ8CIE6 Olfr359-ps1-201ENSMUST00000115977 926 ntBASIC4.88□□□□□ -1.63
CopaQ8CIE6 Olfr1103-ps1-201ENSMUST00000119132 937 ntBASIC4.88□□□□□ -1.63
CopaQ8CIE6 Gm14516-201ENSMUST00000120012 252 ntBASIC4.88□□□□□ -1.63
CopaQ8CIE6 Gm11358-201ENSMUST00000122310 373 ntBASIC4.88□□□□□ -1.63
CopaQ8CIE6 Gm25318-201ENSMUST00000122554 314 ntBASIC4.88□□□□□ -1.63
CopaQ8CIE6 Gm25103-201ENSMUST00000122671 318 ntBASIC4.88□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 75 ms