Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 2900092C05Rik-201ENSMUST00000032541 887 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Nup88Q8CEC0 Csn1s2b-201ENSMUST00000072539 810 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
Nup88Q8CEC0 Olfr262-201ENSMUST00000087818 939 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
Nup88Q8CEC0 Olfr1297-201ENSMUST00000099612 939 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
Nup88Q8CEC0 Adam26b-201ENSMUST00000080135 2476 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Nup88Q8CEC0 Olfr1507-203ENSMUST00000206062 2803 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
Nup88Q8CEC0 Btbd35f10-201ENSMUST00000178621 1952 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
Nup88Q8CEC0 Gm38091-201ENSMUST00000192418 3871 ntBASIC4.92□□□□□ -1.62
Nup88Q8CEC0 Ddx60-202ENSMUST00000093485 5989 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
Nup88Q8CEC0 Nxt2-202ENSMUST00000112913 2538 ntTSL 3 BASIC4.92□□□□□ -1.62
Nup88Q8CEC0 Olfr646-202ENSMUST00000214099 3778 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
Nup88Q8CEC0 Olfr694-204ENSMUST00000216895 4853 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
Nup88Q8CEC0 Gm42717-201ENSMUST00000197309 3463 ntBASIC4.92□□□□□ -1.62
Nup88Q8CEC0 Trim30e-ps1-201ENSMUST00000147064 1890 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Nup88Q8CEC0 4930533N22Rik-202ENSMUST00000206684 1503 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Nup88Q8CEC0 Zfp62-201ENSMUST00000061757 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Nup88Q8CEC0 AC152162.1-201ENSMUST00000225910 2917 ntBASIC4.91□□□□□ -1.62
Nup88Q8CEC0 Elf1-202ENSMUST00000110835 3888 ntAPPRIS P2 TSL 1 (best) BASIC4.91□□□□□ -1.62
Nup88Q8CEC0 Gm37527-201ENSMUST00000192406 3547 ntBASIC4.91□□□□□ -1.62
Nup88Q8CEC0 Gm37268-201ENSMUST00000192254 2614 ntBASIC4.91□□□□□ -1.62
Nup88Q8CEC0 Nlrp2-201ENSMUST00000045022 3404 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Nup88Q8CEC0 Igkv14-100-201ENSMUST00000103325 350 ntAPPRIS ALT2 BASIC4.91□□□□□ -1.62
Nup88Q8CEC0 Gm11890-201ENSMUST00000119585 417 ntBASIC4.91□□□□□ -1.62
Nup88Q8CEC0 Gm22204-201ENSMUST00000122654 327 ntBASIC4.91□□□□□ -1.62
Nup88Q8CEC0 Gm22453-201ENSMUST00000122801 318 ntBASIC4.91□□□□□ -1.62
Nup88Q8CEC0 Gm12762-201ENSMUST00000140881 483 ntTSL 2 BASIC4.91□□□□□ -1.62
Nup88Q8CEC0 Gm14167-201ENSMUST00000148705 433 ntTSL 3 BASIC4.91□□□□□ -1.62
Nup88Q8CEC0 Gm26219-201ENSMUST00000175216 71 ntBASIC4.91□□□□□ -1.62
Nup88Q8CEC0 Gm20619-202ENSMUST00000176283 1085 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Nup88Q8CEC0 Gm22367-201ENSMUST00000178930 132 ntBASIC4.91□□□□□ -1.62
Nup88Q8CEC0 Gm28364-201ENSMUST00000187908 334 ntTSL 3 BASIC4.91□□□□□ -1.62
Nup88Q8CEC0 Gm28639-201ENSMUST00000191519 481 ntBASIC4.91□□□□□ -1.62
Nup88Q8CEC0 4933401J01Rik-201ENSMUST00000193812 1070 ntBASIC4.91□□□□□ -1.62
Nup88Q8CEC0 Gm38053-201ENSMUST00000193938 160 ntBASIC4.91□□□□□ -1.62
Nup88Q8CEC0 Gm38268-201ENSMUST00000195813 193 ntBASIC4.91□□□□□ -1.62
Nup88Q8CEC0 Gm43001-202ENSMUST00000199076 192 ntTSL 3 BASIC4.91□□□□□ -1.62
Nup88Q8CEC0 Olfr879-ps1-201ENSMUST00000212455 694 ntBASIC4.91□□□□□ -1.62
Nup88Q8CEC0 AC159472.1-201ENSMUST00000218178 463 ntBASIC4.91□□□□□ -1.62
Nup88Q8CEC0 AC160970.1-201ENSMUST00000219311 475 ntBASIC4.91□□□□□ -1.62
Nup88Q8CEC0 AC151730.2-201ENSMUST00000224027 475 ntBASIC4.91□□□□□ -1.62
Nup88Q8CEC0 AC183096.1-201ENSMUST00000226392 130 ntBASIC4.91□□□□□ -1.62
Nup88Q8CEC0 Hmgb1-203ENSMUST00000110505 1720 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Nup88Q8CEC0 Esp31-201ENSMUST00000174742 1308 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Nup88Q8CEC0 Vmn2r35-201ENSMUST00000169683 2586 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
Nup88Q8CEC0 Olfr1356-202ENSMUST00000205100 3023 ntAPPRIS P1 TSL 2 BASIC4.91□□□□□ -1.62
Nup88Q8CEC0 Gabra3-202ENSMUST00000114554 1790 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
Nup88Q8CEC0 Olfr612-202ENSMUST00000214269 2420 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
Nup88Q8CEC0 Nufip2-201ENSMUST00000100802 5158 ntAPPRIS P2 TSL 1 (best) BASIC4.91□□□□□ -1.62
Nup88Q8CEC0 Olfr1305-202ENSMUST00000213405 1815 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
Nup88Q8CEC0 Olfr733-203ENSMUST00000214756 3640 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
Nup88Q8CEC0 Gm43913-201ENSMUST00000203924 3029 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
Nup88Q8CEC0 Nebl-202ENSMUST00000124270 8079 ntTSL 5 BASIC4.9□□□□□ -1.62
Nup88Q8CEC0 Igkv14-111-201ENSMUST00000103320 368 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
Nup88Q8CEC0 Igkv8-19-201ENSMUST00000103389 305 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
Nup88Q8CEC0 Gm26019-201ENSMUST00000104407 119 ntBASIC4.9□□□□□ -1.63
Nup88Q8CEC0 Gm4596-201ENSMUST00000117197 442 ntBASIC4.9□□□□□ -1.63
Nup88Q8CEC0 Gm25386-201ENSMUST00000157814 288 ntBASIC4.9□□□□□ -1.63
Nup88Q8CEC0 Gm23554-201ENSMUST00000157818 110 ntBASIC4.9□□□□□ -1.63
Nup88Q8CEC0 Gm27695-201ENSMUST00000184301 91 ntBASIC4.9□□□□□ -1.63
Nup88Q8CEC0 Faiml-202ENSMUST00000188555 560 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
Nup88Q8CEC0 Gm7449-201ENSMUST00000194393 663 ntBASIC4.9□□□□□ -1.63
Nup88Q8CEC0 Gm37577-203ENSMUST00000194712 991 ntTSL 5 BASIC4.9□□□□□ -1.63
Nup88Q8CEC0 Gm42565-201ENSMUST00000197839 572 ntTSL 5 BASIC4.9□□□□□ -1.63
Nup88Q8CEC0 B230334C09Rik-201ENSMUST00000200255 8927 ntBASIC4.9□□□□□ -1.63
Nup88Q8CEC0 1700011C11Rik-201ENSMUST00000205268 365 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
Nup88Q8CEC0 Gm17780-201ENSMUST00000207142 612 ntBASIC4.9□□□□□ -1.63
Nup88Q8CEC0 Gm9373-201ENSMUST00000208724 599 ntBASIC4.9□□□□□ -1.63
Nup88Q8CEC0 Gm36445-205ENSMUST00000211729 1100 ntTSL 5 BASIC4.9□□□□□ -1.63
Nup88Q8CEC0 Gm40608-201ENSMUST00000213692 654 ntTSL 3 BASIC4.9□□□□□ -1.63
Nup88Q8CEC0 AC127581.1-201ENSMUST00000214084 771 ntTSL 5 BASIC4.9□□□□□ -1.63
Nup88Q8CEC0 AC153899.1-201ENSMUST00000214092 1117 ntBASIC4.9□□□□□ -1.63
Nup88Q8CEC0 Gm6841-201ENSMUST00000220602 598 ntBASIC4.9□□□□□ -1.63
Nup88Q8CEC0 AC159622.3-201ENSMUST00000221010 361 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
Nup88Q8CEC0 CT009733.1-201ENSMUST00000225322 425 ntBASIC4.9□□□□□ -1.63
Nup88Q8CEC0 AC133654.1-201ENSMUST00000228411 672 ntBASIC4.9□□□□□ -1.63
Nup88Q8CEC0 C2cd6b-201ENSMUST00000054653 878 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
Nup88Q8CEC0 Sprr2e-201ENSMUST00000068399 647 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Nup88Q8CEC0 Olfr347-201ENSMUST00000078761 943 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
Nup88Q8CEC0 Gm37363-201ENSMUST00000192336 2233 ntBASIC4.9□□□□□ -1.63
Nup88Q8CEC0 Lpar4-201ENSMUST00000060576 4238 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Nup88Q8CEC0 D130004A15Rik-201ENSMUST00000201492 1577 ntBASIC4.9□□□□□ -1.63
Nup88Q8CEC0 2410012E07Rik-201ENSMUST00000190896 1357 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
Nup88Q8CEC0 Ktn1-201ENSMUST00000022391 4484 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
Nup88Q8CEC0 Olfr653-202ENSMUST00000215585 4765 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
Nup88Q8CEC0 Olfr653-203ENSMUST00000217466 4786 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
Nup88Q8CEC0 Gm15226-201ENSMUST00000156526 2971 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Nup88Q8CEC0 Gm29325-201ENSMUST00000190705 2528 ntBASIC4.89□□□□□ -1.63
Nup88Q8CEC0 Gm13088-201ENSMUST00000105771 1819 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
Nup88Q8CEC0 Olfr1500-202ENSMUST00000214475 2697 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
Nup88Q8CEC0 Olfr1226-206ENSMUST00000217601 2670 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
Nup88Q8CEC0 Gm22269-201ENSMUST00000104002 130 ntBASIC4.89□□□□□ -1.63
Nup88Q8CEC0 Gm15076-201ENSMUST00000117076 474 ntBASIC4.89□□□□□ -1.63
Nup88Q8CEC0 Gm5060-201ENSMUST00000120072 599 ntBASIC4.89□□□□□ -1.63
Nup88Q8CEC0 Gm8200-201ENSMUST00000122390 222 ntBASIC4.89□□□□□ -1.63
Nup88Q8CEC0 Gm4487-201ENSMUST00000150617 442 ntBASIC4.89□□□□□ -1.63
Nup88Q8CEC0 Gm24961-201ENSMUST00000157918 184 ntBASIC4.89□□□□□ -1.63
Nup88Q8CEC0 Gm23205-201ENSMUST00000158671 103 ntBASIC4.89□□□□□ -1.63
Nup88Q8CEC0 Gm24664-201ENSMUST00000158939 100 ntBASIC4.89□□□□□ -1.63
Nup88Q8CEC0 Gm25971-201ENSMUST00000158953 286 ntBASIC4.89□□□□□ -1.63
Nup88Q8CEC0 Vmn1r122-201ENSMUST00000164409 918 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 240.6 ms