Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Ccdc152-201ENSMUST00000165386 798 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Col6a6Q8C6K9 Gm28358-202ENSMUST00000189292 223 ntBASIC3.32□□□□□ -1.88
Col6a6Q8C6K9 Gm28822-201ENSMUST00000191140 778 ntTSL 5 BASIC3.32□□□□□ -1.88
Col6a6Q8C6K9 Gm45686-201ENSMUST00000210259 460 ntTSL 5 BASIC3.32□□□□□ -1.88
Col6a6Q8C6K9 AC153971.2-201ENSMUST00000214553 777 ntBASIC3.32□□□□□ -1.88
Col6a6Q8C6K9 Gm32281-202ENSMUST00000217220 691 ntTSL 3 BASIC3.32□□□□□ -1.88
Col6a6Q8C6K9 AF357428-201ENSMUST00000083815 69 ntBASIC3.32□□□□□ -1.88
Col6a6Q8C6K9 Olfr594-201ENSMUST00000098205 1087 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Col6a6Q8C6K9 Olfr1233-201ENSMUST00000099784 1042 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Col6a6Q8C6K9 Olfr1087-201ENSMUST00000099877 942 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Col6a6Q8C6K9 Ankrd31-201ENSMUST00000207464 5146 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Col6a6Q8C6K9 Gm16185-201ENSMUST00000125071 3207 ntTSL 5 BASIC3.32□□□□□ -1.88
Col6a6Q8C6K9 Gm37498-201ENSMUST00000193524 4002 ntBASIC3.32□□□□□ -1.88
Col6a6Q8C6K9 Vmn2r105-201ENSMUST00000167382 2583 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Col6a6Q8C6K9 Olfr97-205ENSMUST00000214848 1861 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Col6a6Q8C6K9 Ncoa7-207ENSMUST00000215740 7043 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
Col6a6Q8C6K9 Gm45030-201ENSMUST00000207575 1774 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Col6a6Q8C6K9 Gm14981-201ENSMUST00000117325 943 ntBASIC3.31□□□□□ -1.88
Col6a6Q8C6K9 R3hcc1l-202ENSMUST00000160107 950 ntAPPRIS ALT2 TSL 2 BASIC3.31□□□□□ -1.88
Col6a6Q8C6K9 Cnot2-213ENSMUST00000169921 2120 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Col6a6Q8C6K9 Gm9931-201ENSMUST00000193584 1185 ntBASIC3.31□□□□□ -1.88
Col6a6Q8C6K9 2210017I01Rik-201ENSMUST00000195278 822 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Col6a6Q8C6K9 Gm43475-201ENSMUST00000196673 400 ntTSL 2 BASIC3.31□□□□□ -1.88
Col6a6Q8C6K9 Gm45845-201ENSMUST00000207326 582 ntBASIC3.31□□□□□ -1.88
Col6a6Q8C6K9 Gm18597-201ENSMUST00000209519 694 ntBASIC3.31□□□□□ -1.88
Col6a6Q8C6K9 AC152062.1-201ENSMUST00000218129 386 ntBASIC3.31□□□□□ -1.88
Col6a6Q8C6K9 AC154598.1-201ENSMUST00000227079 347 ntBASIC3.31□□□□□ -1.88
Col6a6Q8C6K9 Tsx-201ENSMUST00000033691 812 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Col6a6Q8C6K9 Olfr294-201ENSMUST00000078588 1008 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Col6a6Q8C6K9 Gm22154-201ENSMUST00000083844 131 ntBASIC3.31□□□□□ -1.88
Col6a6Q8C6K9 Olfr988-201ENSMUST00000099928 1076 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Col6a6Q8C6K9 Gm43341-201ENSMUST00000200104 1308 ntBASIC3.31□□□□□ -1.88
Col6a6Q8C6K9 Vmn2r86-201ENSMUST00000170257 3039 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Col6a6Q8C6K9 Fnbp1l-203ENSMUST00000162947 1830 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Col6a6Q8C6K9 B020011L13Rik-201ENSMUST00000188801 2879 ntAPPRIS P1 TSL 3 BASIC3.31□□□□□ -1.88
Col6a6Q8C6K9 Themis-202ENSMUST00000060409 2278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
Col6a6Q8C6K9 Vmn1r30-204ENSMUST00000228577 1968 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Col6a6Q8C6K9 AC121997.2-203ENSMUST00000228613 4192 ntBASIC3.31□□□□□ -1.88
Col6a6Q8C6K9 Nsa2-201ENSMUST00000073456 2700 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Col6a6Q8C6K9 Trav14d-3-dv8-201ENSMUST00000103608 456 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Col6a6Q8C6K9 Gm14622-201ENSMUST00000117117 468 ntBASIC3.31□□□□□ -1.88
Col6a6Q8C6K9 Gm8840-201ENSMUST00000122454 386 ntBASIC3.31□□□□□ -1.88
Col6a6Q8C6K9 Gm13266-203ENSMUST00000193364 421 ntTSL 3 BASIC3.31□□□□□ -1.88
Col6a6Q8C6K9 E330037G11Rik-201ENSMUST00000204295 1086 ntBASIC3.31□□□□□ -1.88
Col6a6Q8C6K9 Gm272-201ENSMUST00000222073 919 ntBASIC3.31□□□□□ -1.88
Col6a6Q8C6K9 Gm36525-201ENSMUST00000222590 638 ntTSL 5 BASIC3.31□□□□□ -1.88
Col6a6Q8C6K9 Mir215-201ENSMUST00000083628 112 ntBASIC3.31□□□□□ -1.88
Col6a6Q8C6K9 Zfp426-208ENSMUST00000166005 1653 ntAPPRIS P3 TSL 5 BASIC3.31□□□□□ -1.88
Col6a6Q8C6K9 Olfr575-202ENSMUST00000213477 3512 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Col6a6Q8C6K9 Ckap5-204ENSMUST00000111338 6665 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Col6a6Q8C6K9 Gm12845-201ENSMUST00000203629 1767 ntAPPRIS P5 TSL 5 BASIC3.3□□□□□ -1.88
Col6a6Q8C6K9 Olfr1043-203ENSMUST00000213949 1778 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Col6a6Q8C6K9 Gm3543-201ENSMUST00000111870 899 ntAPPRIS P1 TSL 3 BASIC3.3□□□□□ -1.88
Col6a6Q8C6K9 Rpl38-ps2-201ENSMUST00000117356 213 ntBASIC3.3□□□□□ -1.88
Col6a6Q8C6K9 Gm8129-201ENSMUST00000118230 213 ntBASIC3.3□□□□□ -1.88
Col6a6Q8C6K9 Klrc2-203ENSMUST00000118401 707 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
Col6a6Q8C6K9 Olfr1397-ps1-201ENSMUST00000121388 962 ntBASIC3.3□□□□□ -1.88
Col6a6Q8C6K9 Gm12071-201ENSMUST00000121968 469 ntBASIC3.3□□□□□ -1.88
Col6a6Q8C6K9 Gm7656-201ENSMUST00000182468 1004 ntBASIC3.3□□□□□ -1.88
Col6a6Q8C6K9 Gm29186-201ENSMUST00000189178 660 ntTSL 2 BASIC3.3□□□□□ -1.88
Col6a6Q8C6K9 1700042D02Rik-201ENSMUST00000198232 389 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Col6a6Q8C6K9 Olfr638-201ENSMUST00000209757 966 ntAPPRIS P2 BASIC3.3□□□□□ -1.88
Col6a6Q8C6K9 Olfr682-ps1-202ENSMUST00000214399 897 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Col6a6Q8C6K9 AC142499.1-201ENSMUST00000220036 374 ntBASIC3.3□□□□□ -1.88
Col6a6Q8C6K9 AC133283.1-201ENSMUST00000228443 859 ntBASIC3.3□□□□□ -1.88
Col6a6Q8C6K9 Olfr1033-202ENSMUST00000213865 3664 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Col6a6Q8C6K9 Zfp266-202ENSMUST00000174462 6283 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Col6a6Q8C6K9 Gm35835-202ENSMUST00000216984 3350 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Col6a6Q8C6K9 Olfr168-202ENSMUST00000213480 2205 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Col6a6Q8C6K9 Vmn1r171-207ENSMUST00000227774 2867 ntAPPRIS ALT2 BASIC3.3□□□□□ -1.88
Col6a6Q8C6K9 Gm11623-201ENSMUST00000120176 1225 ntBASIC3.3□□□□□ -1.88
Col6a6Q8C6K9 Gm24936-201ENSMUST00000122598 247 ntBASIC3.3□□□□□ -1.88
Col6a6Q8C6K9 Prlr-205ENSMUST00000128921 3836 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
Col6a6Q8C6K9 Gm8267-202ENSMUST00000169062 1240 ntAPPRIS P2 TSL 5 BASIC3.3□□□□□ -1.88
Col6a6Q8C6K9 Gm9947-202ENSMUST00000187401 687 ntTSL 5 BASIC3.3□□□□□ -1.88
Col6a6Q8C6K9 Olfr202-202ENSMUST00000201687 1232 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Col6a6Q8C6K9 Gm6303-201ENSMUST00000210123 471 ntBASIC3.3□□□□□ -1.88
Col6a6Q8C6K9 Olfr1029-201ENSMUST00000082191 1061 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Col6a6Q8C6K9 Snord15a-201ENSMUST00000083888 148 ntBASIC3.3□□□□□ -1.88
Col6a6Q8C6K9 Tas2r115-201ENSMUST00000095394 1033 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Col6a6Q8C6K9 Cftr-204ENSMUST00000129452 2835 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Col6a6Q8C6K9 Senp8-201ENSMUST00000051039 3682 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
Col6a6Q8C6K9 Gm24048-201ENSMUST00000102411 106 ntBASIC3.29□□□□□ -1.88
Col6a6Q8C6K9 Gm23697-201ENSMUST00000103897 110 ntBASIC3.29□□□□□ -1.88
Col6a6Q8C6K9 Gm12805-201ENSMUST00000117305 1048 ntBASIC3.29□□□□□ -1.88
Col6a6Q8C6K9 Gm11216-201ENSMUST00000125240 354 ntTSL 5 BASIC3.29□□□□□ -1.88
Col6a6Q8C6K9 Gm25436-201ENSMUST00000158275 145 ntBASIC3.29□□□□□ -1.88
Col6a6Q8C6K9 Gm16300-201ENSMUST00000160031 1279 ntBASIC3.29□□□□□ -1.88
Col6a6Q8C6K9 1700105G05Rik-201ENSMUST00000222238 411 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Col6a6Q8C6K9 AC124746.2-201ENSMUST00000226594 427 ntBASIC3.29□□□□□ -1.88
Col6a6Q8C6K9 Olfr235-201ENSMUST00000073507 1079 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Col6a6Q8C6K9 Gm10282-201ENSMUST00000075602 1151 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Col6a6Q8C6K9 Spc25-201ENSMUST00000005365 1352 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
Col6a6Q8C6K9 Zfp458-204ENSMUST00000225772 3485 ntAPPRIS ALT2 BASIC3.29□□□□□ -1.88
Col6a6Q8C6K9 Zfp458-201ENSMUST00000045969 3488 ntAPPRIS P2 TSL 1 (best) BASIC3.29□□□□□ -1.88
Col6a6Q8C6K9 AC124586.1-201ENSMUST00000221673 2795 ntBASIC3.29□□□□□ -1.88
Col6a6Q8C6K9 Znf41-ps-201ENSMUST00000122051 2413 ntBASIC3.29□□□□□ -1.88
Col6a6Q8C6K9 Gm2004-201ENSMUST00000109049 1749 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Col6a6Q8C6K9 Gm14419-202ENSMUST00000126358 1749 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Col6a6Q8C6K9 Gm11110-201ENSMUST00000112915 1013 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 77.6 ms