Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Gm12649-201ENSMUST00000137509 581 ntTSL 3 BASIC5.21□□□□□ -1.58
Usp47Q8BY87 Gm25860-201ENSMUST00000158252 126 ntBASIC5.21□□□□□ -1.58
Usp47Q8BY87 Gm22890-201ENSMUST00000158642 144 ntBASIC5.21□□□□□ -1.58
Usp47Q8BY87 Gm16303-201ENSMUST00000161498 390 ntBASIC5.21□□□□□ -1.58
Usp47Q8BY87 Vmn1r167-201ENSMUST00000164527 948 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Usp47Q8BY87 Gm20538-201ENSMUST00000166808 225 ntAPPRIS P1 TSL 3 BASIC5.21□□□□□ -1.58
Usp47Q8BY87 H2al1k-201ENSMUST00000178196 510 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Usp47Q8BY87 Rhoay-ps3-201ENSMUST00000187648 576 ntBASIC5.21□□□□□ -1.58
Usp47Q8BY87 Gm28822-201ENSMUST00000191140 778 ntTSL 5 BASIC5.21□□□□□ -1.58
Usp47Q8BY87 Gm44355-201ENSMUST00000200417 104 ntBASIC5.21□□□□□ -1.58
Usp47Q8BY87 Gm42723-202ENSMUST00000200561 1254 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Usp47Q8BY87 Gm43084-201ENSMUST00000200696 947 ntBASIC5.21□□□□□ -1.58
Usp47Q8BY87 C430039J01Rik-201ENSMUST00000205973 957 ntBASIC5.21□□□□□ -1.58
Usp47Q8BY87 E330011O21Rik-203ENSMUST00000210555 455 ntTSL 5 BASIC5.21□□□□□ -1.58
Usp47Q8BY87 1700037F03Rik-201ENSMUST00000223032 365 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Usp47Q8BY87 Olfr969-201ENSMUST00000074566 936 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Usp47Q8BY87 Olfr611-201ENSMUST00000078108 972 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Usp47Q8BY87 Gm24147-201ENSMUST00000082763 144 ntBASIC5.21□□□□□ -1.58
Usp47Q8BY87 Gm45304-201ENSMUST00000210303 2828 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Usp47Q8BY87 Tex47-202ENSMUST00000159546 1402 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Usp47Q8BY87 B830012L14Rik-201ENSMUST00000182785 4505 ntTSL 5 BASIC5.21□□□□□ -1.58
Usp47Q8BY87 Sult1b1-202ENSMUST00000117455 2612 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Usp47Q8BY87 Gm42993-201ENSMUST00000196856 7325 ntBASIC5.21□□□□□ -1.58
Usp47Q8BY87 AC153150.1-201ENSMUST00000226065 3782 ntBASIC5.21□□□□□ -1.58
Usp47Q8BY87 Ap3s1-ps1-201ENSMUST00000117113 579 ntBASIC5.2□□□□□ -1.58
Usp47Q8BY87 Gm8402-201ENSMUST00000118183 1770 ntBASIC5.2□□□□□ -1.58
Usp47Q8BY87 Gm12677-201ENSMUST00000118668 426 ntBASIC5.2□□□□□ -1.58
Usp47Q8BY87 Gm8383-201ENSMUST00000121179 1770 ntBASIC5.2□□□□□ -1.58
Usp47Q8BY87 Gm11579-201ENSMUST00000145502 845 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Usp47Q8BY87 Gm12204-201ENSMUST00000147412 333 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Usp47Q8BY87 Gm23540-201ENSMUST00000157543 164 ntBASIC5.2□□□□□ -1.58
Usp47Q8BY87 Gm23666-201ENSMUST00000158053 116 ntBASIC5.2□□□□□ -1.58
Usp47Q8BY87 Gm25037-201ENSMUST00000175418 110 ntBASIC5.2□□□□□ -1.58
Usp47Q8BY87 Gm22852-201ENSMUST00000177899 101 ntBASIC5.2□□□□□ -1.58
Usp47Q8BY87 Ap3s1-ps2-201ENSMUST00000178107 579 ntBASIC5.2□□□□□ -1.58
Usp47Q8BY87 Gm29161-201ENSMUST00000188250 699 ntBASIC5.2□□□□□ -1.58
Usp47Q8BY87 Olfr258-ps1-201ENSMUST00000192471 891 ntBASIC5.2□□□□□ -1.58
Usp47Q8BY87 Gm18403-201ENSMUST00000192907 529 ntBASIC5.2□□□□□ -1.58
Usp47Q8BY87 Gm43010-201ENSMUST00000195993 2878 ntBASIC5.2□□□□□ -1.58
Usp47Q8BY87 Gm45246-201ENSMUST00000210820 367 ntBASIC5.2□□□□□ -1.58
Usp47Q8BY87 AC153563.1-202ENSMUST00000217695 1838 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Usp47Q8BY87 AC132384.13-201ENSMUST00000219556 1159 ntBASIC5.2□□□□□ -1.58
Usp47Q8BY87 Gm9309-201ENSMUST00000223537 546 ntBASIC5.2□□□□□ -1.58
Usp47Q8BY87 AC133101.1-201ENSMUST00000226939 1199 ntBASIC5.2□□□□□ -1.58
Usp47Q8BY87 Serpinb3d-201ENSMUST00000023861 1216 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Usp47Q8BY87 Prl8a1-201ENSMUST00000006664 864 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Usp47Q8BY87 Olfr575-203ENSMUST00000216420 3500 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Usp47Q8BY87 Gm31592-201ENSMUST00000217529 3471 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Usp47Q8BY87 Has2-201ENSMUST00000050544 4237 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Usp47Q8BY87 Olfr1196-201ENSMUST00000104892 945 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Usp47Q8BY87 Gm11704-201ENSMUST00000120031 214 ntBASIC5.19□□□□□ -1.58
Usp47Q8BY87 Gm23773-201ENSMUST00000158985 296 ntBASIC5.19□□□□□ -1.58
Usp47Q8BY87 Gm17210-201ENSMUST00000169975 391 ntTSL 3 BASIC5.19□□□□□ -1.58
Usp47Q8BY87 Trbv8-201ENSMUST00000194020 285 ntBASIC5.19□□□□□ -1.58
Usp47Q8BY87 Gm38088-201ENSMUST00000195829 241 ntBASIC5.19□□□□□ -1.58
Usp47Q8BY87 Gm44040-201ENSMUST00000203360 545 ntTSL 3 BASIC5.19□□□□□ -1.58
Usp47Q8BY87 4930453C13Rik-201ENSMUST00000222376 765 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Usp47Q8BY87 Gm3565-201ENSMUST00000222670 609 ntBASIC5.19□□□□□ -1.58
Usp47Q8BY87 AC106830.1-201ENSMUST00000228032 1003 ntBASIC5.19□□□□□ -1.58
Usp47Q8BY87 Olfr1446-201ENSMUST00000081236 1044 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Usp47Q8BY87 Gm15292-201ENSMUST00000098895 385 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Usp47Q8BY87 Pik3c2a-201ENSMUST00000170430 8044 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Usp47Q8BY87 Olfr1101-202ENSMUST00000214411 3235 ntAPPRIS P1 TSL 3 BASIC5.19□□□□□ -1.58
Usp47Q8BY87 Vmn1r171-206ENSMUST00000227386 2570 ntAPPRIS ALT2 BASIC5.19□□□□□ -1.58
Usp47Q8BY87 Olfr963-202ENSMUST00000215649 2203 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Usp47Q8BY87 Iigp1-202ENSMUST00000066912 2938 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Usp47Q8BY87 Olfr516-203ENSMUST00000217279 1441 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Usp47Q8BY87 Neat1-201ENSMUST00000173672 20771 ntBASIC5.18□□□□□ -1.58
Usp47Q8BY87 Gm25168-201ENSMUST00000104189 132 ntBASIC5.18□□□□□ -1.58
Usp47Q8BY87 Bpifc-202ENSMUST00000105304 451 ntTSL 5 BASIC5.18□□□□□ -1.58
Usp47Q8BY87 Sva-202ENSMUST00000117406 645 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
Usp47Q8BY87 Gm13924-201ENSMUST00000119899 486 ntBASIC5.18□□□□□ -1.58
Usp47Q8BY87 Gm14739-201ENSMUST00000120424 802 ntBASIC5.18□□□□□ -1.58
Usp47Q8BY87 Gm28148-201ENSMUST00000186924 697 ntBASIC5.18□□□□□ -1.58
Usp47Q8BY87 Gm36943-201ENSMUST00000194422 282 ntBASIC5.18□□□□□ -1.58
Usp47Q8BY87 Olfr1480-203ENSMUST00000207904 1209 ntAPPRIS P1 TSL 3 BASIC5.18□□□□□ -1.58
Usp47Q8BY87 CT009748.1-201ENSMUST00000216068 269 ntTSL 5 BASIC5.18□□□□□ -1.58
Usp47Q8BY87 Olfr818-201ENSMUST00000074308 957 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Usp47Q8BY87 Olfr262-201ENSMUST00000087818 939 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Usp47Q8BY87 Olfr681-201ENSMUST00000098157 948 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Usp47Q8BY87 Olfr679-201ENSMUST00000098158 952 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Usp47Q8BY87 Cfhr1-201ENSMUST00000023965 1793 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Usp47Q8BY87 Gm26563-201ENSMUST00000181003 1704 ntTSL 5 BASIC5.18□□□□□ -1.58
Usp47Q8BY87 Dync2h1-204ENSMUST00000140466 14264 ntAPPRIS P2 TSL 5 BASIC5.18□□□□□ -1.58
Usp47Q8BY87 Olfr1163-202ENSMUST00000215268 1611 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Usp47Q8BY87 Gm43327-201ENSMUST00000199285 4055 ntBASIC5.18□□□□□ -1.58
Usp47Q8BY87 Vmn1r206-202ENSMUST00000227244 3970 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Usp47Q8BY87 Olfr1317-204ENSMUST00000216988 2488 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Usp47Q8BY87 Gm10635-201ENSMUST00000217201 3721 ntTSL 2 BASIC5.18□□□□□ -1.58
Usp47Q8BY87 Cp-205ENSMUST00000108329 4564 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
Usp47Q8BY87 Nae1-201ENSMUST00000034349 1808 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Usp47Q8BY87 Hdx-202ENSMUST00000113422 9534 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Usp47Q8BY87 Psg25-201ENSMUST00000094795 3109 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Usp47Q8BY87 Ssx9-201ENSMUST00000103001 602 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Usp47Q8BY87 Igkv4-69-201ENSMUST00000103349 348 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Usp47Q8BY87 Gm25272-201ENSMUST00000104293 128 ntBASIC5.17□□□□□ -1.58
Usp47Q8BY87 Gm11913-201ENSMUST00000119094 336 ntBASIC5.17□□□□□ -1.58
Usp47Q8BY87 Gm9043-201ENSMUST00000119677 314 ntBASIC5.17□□□□□ -1.58
Usp47Q8BY87 4933403O08Rik-201ENSMUST00000132037 999 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
Usp47Q8BY87 Gm13266-201ENSMUST00000141869 579 ntTSL 2 BASIC5.17□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 66.9 ms