Protein–RNA interactions for Protein: Q80VI1

Trim56, E3 ubiquitin-protein ligase TRIM56, mousemouse

Known RBP Predictions only

Length 734 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56Q80VI1 Gm14929-201ENSMUST00000152079 1850 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Trim56Q80VI1 Lrrc4c-203ENSMUST00000162807 3132 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Trim56Q80VI1 Gm14520-201ENSMUST00000119258 387 ntBASIC6.14□□□□□ -1.43
Trim56Q80VI1 Gm12569-202ENSMUST00000126189 796 ntTSL 5 BASIC6.14□□□□□ -1.43
Trim56Q80VI1 4933416E14Rik-201ENSMUST00000130841 491 ntBASIC6.14□□□□□ -1.43
Trim56Q80VI1 Gm4134-201ENSMUST00000173244 563 ntBASIC6.14□□□□□ -1.43
Trim56Q80VI1 Gm21828-201ENSMUST00000178050 543 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Trim56Q80VI1 Gm21866-201ENSMUST00000178428 543 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Trim56Q80VI1 Gm21725-201ENSMUST00000178519 543 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Trim56Q80VI1 Gm21800-201ENSMUST00000178559 543 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Trim56Q80VI1 Gm21852-201ENSMUST00000179125 543 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Trim56Q80VI1 Gm21764-201ENSMUST00000179219 543 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Trim56Q80VI1 Gm21891-201ENSMUST00000179284 543 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Trim56Q80VI1 Gm21904-201ENSMUST00000179522 543 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Trim56Q80VI1 Gm27543-201ENSMUST00000183562 177 ntBASIC6.14□□□□□ -1.43
Trim56Q80VI1 1810064F22Rik-202ENSMUST00000187399 630 ntTSL 3 BASIC6.14□□□□□ -1.43
Trim56Q80VI1 Gm37523-201ENSMUST00000194901 412 ntBASIC6.14□□□□□ -1.43
Trim56Q80VI1 Gm37220-201ENSMUST00000195179 415 ntTSL 5 BASIC6.14□□□□□ -1.43
Trim56Q80VI1 Gm2623-201ENSMUST00000199229 286 ntBASIC6.14□□□□□ -1.43
Trim56Q80VI1 Sult1c2-ps1-201ENSMUST00000200231 164 ntBASIC6.14□□□□□ -1.43
Trim56Q80VI1 Gm44307-201ENSMUST00000204466 764 ntBASIC6.14□□□□□ -1.43
Trim56Q80VI1 Gm44002-201ENSMUST00000205134 594 ntBASIC6.14□□□□□ -1.43
Trim56Q80VI1 Ifitm6-202ENSMUST00000209328 678 ntAPPRIS P2 TSL 5 BASIC6.14□□□□□ -1.43
Trim56Q80VI1 AC151971.3-201ENSMUST00000214694 404 ntBASIC6.14□□□□□ -1.43
Trim56Q80VI1 AC093316.1-201ENSMUST00000218793 529 ntTSL 5 BASIC6.14□□□□□ -1.43
Trim56Q80VI1 AC133101.1-201ENSMUST00000226939 1199 ntBASIC6.14□□□□□ -1.43
Trim56Q80VI1 Gm10226-201ENSMUST00000072133 255 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Trim56Q80VI1 Gm23345-201ENSMUST00000083817 150 ntBASIC6.14□□□□□ -1.43
Trim56Q80VI1 Gm11808-201ENSMUST00000089430 504 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Trim56Q80VI1 Spef2-206ENSMUST00000208854 7038 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
Trim56Q80VI1 Alkbh8-204ENSMUST00000211933 7674 ntAPPRIS P2 TSL 1 (best) BASIC6.14□□□□□ -1.43
Trim56Q80VI1 A330087D11Rik-201ENSMUST00000187265 1334 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Trim56Q80VI1 Vmn1r84-205ENSMUST00000228653 2769 ntAPPRIS ALT2 BASIC6.14□□□□□ -1.43
Trim56Q80VI1 Olfr893-202ENSMUST00000211975 2924 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
Trim56Q80VI1 Olfr477-202ENSMUST00000214677 2930 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Trim56Q80VI1 Fbxw25-201ENSMUST00000163839 1490 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Trim56Q80VI1 Gprc6a-202ENSMUST00000218684 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
Trim56Q80VI1 Abcb7-201ENSMUST00000033695 5667 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Trim56Q80VI1 Kmt2d-201ENSMUST00000023741 19823 ntAPPRIS P2 TSL 5 BASIC6.13□□□□□ -1.43
Trim56Q80VI1 Epyc-201ENSMUST00000020094 1723 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Trim56Q80VI1 Rfx3-202ENSMUST00000165566 9146 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Trim56Q80VI1 Kynu-202ENSMUST00000050511 2778 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Trim56Q80VI1 BC018473-204ENSMUST00000156293 4753 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Trim56Q80VI1 Serpinb9g-201ENSMUST00000081927 1927 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Trim56Q80VI1 Gm4922-201ENSMUST00000055107 1950 ntAPPRIS P1 TSL 3 BASIC6.13□□□□□ -1.43
Trim56Q80VI1 Gm3896-201ENSMUST00000176020 4094 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Trim56Q80VI1 Il6-203ENSMUST00000199183 2343 ntTSL 2 BASIC6.13□□□□□ -1.43
Trim56Q80VI1 Ighv1-47-201ENSMUST00000103518 294 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Trim56Q80VI1 Gm11486-201ENSMUST00000107322 478 ntBASIC6.13□□□□□ -1.43
Trim56Q80VI1 Gm6884-201ENSMUST00000119318 615 ntBASIC6.13□□□□□ -1.43
Trim56Q80VI1 Gm13711-201ENSMUST00000119708 453 ntBASIC6.13□□□□□ -1.43
Trim56Q80VI1 Gm14392-201ENSMUST00000120332 401 ntBASIC6.13□□□□□ -1.43
Trim56Q80VI1 Gm14784-201ENSMUST00000121604 663 ntBASIC6.13□□□□□ -1.43
Trim56Q80VI1 Vmn1r239-ps-201ENSMUST00000127465 960 ntBASIC6.13□□□□□ -1.43
Trim56Q80VI1 Gm11846-201ENSMUST00000155156 515 ntTSL 2 BASIC6.13□□□□□ -1.43
Trim56Q80VI1 Gm25970-201ENSMUST00000157165 86 ntBASIC6.13□□□□□ -1.43
Trim56Q80VI1 Gm25909-201ENSMUST00000157619 121 ntBASIC6.13□□□□□ -1.43
Trim56Q80VI1 Gm24853-201ENSMUST00000158026 121 ntBASIC6.13□□□□□ -1.43
Trim56Q80VI1 Gm23546-201ENSMUST00000158211 137 ntBASIC6.13□□□□□ -1.43
Trim56Q80VI1 Gm10087-201ENSMUST00000167650 330 ntBASIC6.13□□□□□ -1.43
Trim56Q80VI1 Gm24897-201ENSMUST00000179033 107 ntBASIC6.13□□□□□ -1.43
Trim56Q80VI1 Gm27688-201ENSMUST00000183634 91 ntBASIC6.13□□□□□ -1.43
Trim56Q80VI1 Gm28016-201ENSMUST00000184594 196 ntBASIC6.13□□□□□ -1.43
Trim56Q80VI1 Mrgprb12-ps-201ENSMUST00000186150 949 ntBASIC6.13□□□□□ -1.43
Trim56Q80VI1 Pinc-202ENSMUST00000190487 961 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Trim56Q80VI1 Gm34882-201ENSMUST00000193245 974 ntTSL 5 BASIC6.13□□□□□ -1.43
Trim56Q80VI1 Gm38011-201ENSMUST00000193312 279 ntBASIC6.13□□□□□ -1.43
Trim56Q80VI1 Gm10048-201ENSMUST00000194196 372 ntBASIC6.13□□□□□ -1.43
Trim56Q80VI1 Gm33973-201ENSMUST00000195148 534 ntBASIC6.13□□□□□ -1.43
Trim56Q80VI1 Gm2053-201ENSMUST00000195671 631 ntBASIC6.13□□□□□ -1.43
Trim56Q80VI1 Gm43114-201ENSMUST00000198298 343 ntBASIC6.13□□□□□ -1.43
Trim56Q80VI1 Gm42594-201ENSMUST00000199511 246 ntBASIC6.13□□□□□ -1.43
Trim56Q80VI1 Gm5551-201ENSMUST00000199720 690 ntBASIC6.13□□□□□ -1.43
Trim56Q80VI1 Gm19761-201ENSMUST00000205372 391 ntBASIC6.13□□□□□ -1.43
Trim56Q80VI1 Cyp2b26-ps-201ENSMUST00000206238 1090 ntBASIC6.13□□□□□ -1.43
Trim56Q80VI1 Abca15-204ENSMUST00000207220 567 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Trim56Q80VI1 Gm45868-201ENSMUST00000210247 473 ntTSL 3 BASIC6.13□□□□□ -1.43
Trim56Q80VI1 AC144628.2-201ENSMUST00000227374 352 ntBASIC6.13□□□□□ -1.43
Trim56Q80VI1 AC121978.1-201ENSMUST00000228357 380 ntBASIC6.13□□□□□ -1.43
Trim56Q80VI1 Cox6b2-201ENSMUST00000063324 553 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Trim56Q80VI1 Ccdc7b-201ENSMUST00000026912 1447 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Trim56Q80VI1 Timd2-204ENSMUST00000169584 2926 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Trim56Q80VI1 Zfp353-ps-201ENSMUST00000107130 1650 ntBASIC6.13□□□□□ -1.43
Trim56Q80VI1 Ugt2b5-201ENSMUST00000067790 1858 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Trim56Q80VI1 Zfp113-201ENSMUST00000049393 6470 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Trim56Q80VI1 Olfr446-202ENSMUST00000215369 4399 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Trim56Q80VI1 AC131586.2-202ENSMUST00000227016 2705 ntBASIC6.12□□□□□ -1.43
Trim56Q80VI1 Olfr877-202ENSMUST00000213956 2761 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Trim56Q80VI1 Gm32592-201ENSMUST00000205146 3124 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Trim56Q80VI1 Pls3-202ENSMUST00000114057 3160 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Trim56Q80VI1 Olfr1427-202ENSMUST00000215374 3342 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Trim56Q80VI1 Lingo2-210ENSMUST00000164772 3562 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Trim56Q80VI1 Gm25418-201ENSMUST00000104214 129 ntBASIC6.12□□□□□ -1.43
Trim56Q80VI1 Rps24-201ENSMUST00000112384 468 ntAPPRIS ALT1 TSL 5 BASIC6.12□□□□□ -1.43
Trim56Q80VI1 Gm11878-201ENSMUST00000117908 400 ntBASIC6.12□□□□□ -1.43
Trim56Q80VI1 Gm11550-201ENSMUST00000118210 699 ntBASIC6.12□□□□□ -1.43
Trim56Q80VI1 Rps24-ps3-201ENSMUST00000118723 402 ntBASIC6.12□□□□□ -1.43
Trim56Q80VI1 Gm9078-201ENSMUST00000119126 617 ntBASIC6.12□□□□□ -1.43
Trim56Q80VI1 Gm12808-201ENSMUST00000120597 404 ntBASIC6.12□□□□□ -1.43
Trim56Q80VI1 Gm13452-201ENSMUST00000120896 1097 ntBASIC6.12□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 80.7 ms