Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Gm13599-201ENSMUST00000134476 678 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Rnf220Q6PDX6 Gm25553-201ENSMUST00000158076 79 ntBASIC4.92□□□□□ -1.62
Rnf220Q6PDX6 Mir1946a-201ENSMUST00000158360 134 ntBASIC4.92□□□□□ -1.62
Rnf220Q6PDX6 Plgrkt-201ENSMUST00000016639 1012 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Rnf220Q6PDX6 Vmn1r174-201ENSMUST00000167551 942 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
Rnf220Q6PDX6 4930579O11Rik-202ENSMUST00000168243 672 ntTSL 3 BASIC4.92□□□□□ -1.62
Rnf220Q6PDX6 Gm3851-201ENSMUST00000168653 318 ntBASIC4.92□□□□□ -1.62
Rnf220Q6PDX6 Gm20519-201ENSMUST00000173684 359 ntBASIC4.92□□□□□ -1.62
Rnf220Q6PDX6 Gm18522-201ENSMUST00000173947 650 ntBASIC4.92□□□□□ -1.62
Rnf220Q6PDX6 Gm22932-201ENSMUST00000175510 72 ntBASIC4.92□□□□□ -1.62
Rnf220Q6PDX6 Gm27024-201ENSMUST00000182561 755 ntBASIC4.92□□□□□ -1.62
Rnf220Q6PDX6 Ranbp2-ps4-201ENSMUST00000183481 385 ntBASIC4.92□□□□□ -1.62
Rnf220Q6PDX6 Gm27957-201ENSMUST00000184054 127 ntBASIC4.92□□□□□ -1.62
Rnf220Q6PDX6 Gm21858-202ENSMUST00000185713 923 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Rnf220Q6PDX6 Gm21409-201ENSMUST00000186110 923 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Rnf220Q6PDX6 Il20-202ENSMUST00000188581 465 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Rnf220Q6PDX6 AV026068-209ENSMUST00000189143 517 ntTSL 3 BASIC4.92□□□□□ -1.62
Rnf220Q6PDX6 Gm28919-201ENSMUST00000190026 920 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Rnf220Q6PDX6 Gm28961-201ENSMUST00000190573 923 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Rnf220Q6PDX6 Gm29282-201ENSMUST00000190720 473 ntTSL 5 BASIC4.92□□□□□ -1.62
Rnf220Q6PDX6 1700015C17Rik-201ENSMUST00000197297 239 ntTSL 5 BASIC4.92□□□□□ -1.62
Rnf220Q6PDX6 Gm32453-201ENSMUST00000204183 456 ntBASIC4.92□□□□□ -1.62
Rnf220Q6PDX6 Gm43892-201ENSMUST00000204373 265 ntBASIC4.92□□□□□ -1.62
Rnf220Q6PDX6 Gm31861-201ENSMUST00000204563 672 ntBASIC4.92□□□□□ -1.62
Rnf220Q6PDX6 Gm44580-201ENSMUST00000206333 877 ntBASIC4.92□□□□□ -1.62
Rnf220Q6PDX6 Gm29521-203ENSMUST00000216148 805 ntTSL 5 BASIC4.92□□□□□ -1.62
Rnf220Q6PDX6 AC154313.1-201ENSMUST00000217755 3841 ntBASIC4.92□□□□□ -1.62
Rnf220Q6PDX6 Rpl17-ps2-201ENSMUST00000218101 532 ntBASIC4.92□□□□□ -1.62
Rnf220Q6PDX6 Gm36173-201ENSMUST00000219101 1163 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Rnf220Q6PDX6 AC125531.1-201ENSMUST00000219849 221 ntBASIC4.92□□□□□ -1.62
Rnf220Q6PDX6 AC174797.3-202ENSMUST00000224578 587 ntBASIC4.92□□□□□ -1.62
Rnf220Q6PDX6 AC131029.2-201ENSMUST00000226696 628 ntBASIC4.92□□□□□ -1.62
Rnf220Q6PDX6 AC139294.1-201ENSMUST00000226708 571 ntBASIC4.92□□□□□ -1.62
Rnf220Q6PDX6 CT025548.1-201ENSMUST00000227459 257 ntBASIC4.92□□□□□ -1.62
Rnf220Q6PDX6 Gm4779-201ENSMUST00000056225 672 ntTSL 5 BASIC4.92□□□□□ -1.62
Rnf220Q6PDX6 1700013H16Rik-201ENSMUST00000067940 1224 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Rnf220Q6PDX6 Olfr1369-ps1-201ENSMUST00000079050 954 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
Rnf220Q6PDX6 Prl3d2-201ENSMUST00000080755 853 ntAPPRIS P2 TSL 5 BASIC4.92□□□□□ -1.62
Rnf220Q6PDX6 n-R5s37-201ENSMUST00000082533 118 ntBASIC4.92□□□□□ -1.62
Rnf220Q6PDX6 Olfr203-201ENSMUST00000089305 924 ntBASIC4.92□□□□□ -1.62
Rnf220Q6PDX6 Rps19-ps4-201ENSMUST00000091925 438 ntBASIC4.92□□□□□ -1.62
Rnf220Q6PDX6 Mup8-201ENSMUST00000095058 925 ntAPPRIS ALT2 TSL 2 BASIC4.92□□□□□ -1.62
Rnf220Q6PDX6 Olfr1152-202ENSMUST00000213308 6201 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
Rnf220Q6PDX6 Mlip-205ENSMUST00000183955 3069 ntAPPRIS P5 TSL 5 BASIC4.92□□□□□ -1.62
Rnf220Q6PDX6 Gm14014-201ENSMUST00000156718 2717 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Rnf220Q6PDX6 AC115760.1-201ENSMUST00000225160 1327 ntBASIC4.92□□□□□ -1.62
Rnf220Q6PDX6 AC115034.1-201ENSMUST00000215393 3846 ntBASIC4.92□□□□□ -1.62
Rnf220Q6PDX6 AC156632.1-201ENSMUST00000220626 3845 ntBASIC4.92□□□□□ -1.62
Rnf220Q6PDX6 4930579C12Rik-202ENSMUST00000187015 3676 ntTSL 2 BASIC4.92□□□□□ -1.62
Rnf220Q6PDX6 Gm13340-201ENSMUST00000117219 1545 ntBASIC4.92□□□□□ -1.62
Rnf220Q6PDX6 Ankrd28-204ENSMUST00000227089 3522 ntBASIC4.92□□□□□ -1.62
Rnf220Q6PDX6 Spag17-204ENSMUST00000164539 7862 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
Rnf220Q6PDX6 Gm28969-205ENSMUST00000186757 1581 ntTSL 5 BASIC4.91□□□□□ -1.62
Rnf220Q6PDX6 Gm28990-204ENSMUST00000189255 1581 ntTSL 5 BASIC4.91□□□□□ -1.62
Rnf220Q6PDX6 Gm28677-209ENSMUST00000190010 1581 ntTSL 5 BASIC4.91□□□□□ -1.62
Rnf220Q6PDX6 Peli1-202ENSMUST00000101477 3703 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Rnf220Q6PDX6 Scn9a-207ENSMUST00000169900 7497 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
Rnf220Q6PDX6 Gm9611-201ENSMUST00000100698 231 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
Rnf220Q6PDX6 Lipe-203ENSMUST00000105177 1251 ntBASIC4.91□□□□□ -1.62
Rnf220Q6PDX6 Gnrh1-201ENSMUST00000111095 486 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Rnf220Q6PDX6 Gm15087-201ENSMUST00000117465 1172 ntBASIC4.91□□□□□ -1.62
Rnf220Q6PDX6 Gm11409-201ENSMUST00000118621 403 ntBASIC4.91□□□□□ -1.62
Rnf220Q6PDX6 Gm6806-201ENSMUST00000120092 1006 ntBASIC4.91□□□□□ -1.62
Rnf220Q6PDX6 Gm1993-201ENSMUST00000120268 1131 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
Rnf220Q6PDX6 Gm15177-201ENSMUST00000120491 577 ntBASIC4.91□□□□□ -1.62
Rnf220Q6PDX6 Gm11852-201ENSMUST00000120806 222 ntBASIC4.91□□□□□ -1.62
Rnf220Q6PDX6 Mrpl24-203ENSMUST00000121048 1234 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Rnf220Q6PDX6 Gm13356-201ENSMUST00000121678 335 ntBASIC4.91□□□□□ -1.62
Rnf220Q6PDX6 Rps19-ps14-201ENSMUST00000121832 269 ntBASIC4.91□□□□□ -1.62
Rnf220Q6PDX6 Gm14027-201ENSMUST00000135186 622 ntTSL 3 BASIC4.91□□□□□ -1.62
Rnf220Q6PDX6 1810065E05Rik-201ENSMUST00000013797 926 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Rnf220Q6PDX6 Cfap61-212ENSMUST00000152515 640 ntTSL 3 BASIC4.91□□□□□ -1.62
Rnf220Q6PDX6 5330429C05Rik-201ENSMUST00000154615 487 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Rnf220Q6PDX6 Gm23902-201ENSMUST00000157571 134 ntBASIC4.91□□□□□ -1.62
Rnf220Q6PDX6 Gm23318-201ENSMUST00000158000 108 ntBASIC4.91□□□□□ -1.62
Rnf220Q6PDX6 Gm25714-201ENSMUST00000158626 296 ntBASIC4.91□□□□□ -1.62
Rnf220Q6PDX6 Gm3633-202ENSMUST00000163102 231 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
Rnf220Q6PDX6 Ear10-202ENSMUST00000163652 471 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
Rnf220Q6PDX6 Olfr753-ps1-202ENSMUST00000174673 919 ntBASIC4.91□□□□□ -1.62
Rnf220Q6PDX6 Gm22166-201ENSMUST00000178419 121 ntBASIC4.91□□□□□ -1.62
Rnf220Q6PDX6 Gm23288-201ENSMUST00000179213 121 ntBASIC4.91□□□□□ -1.62
Rnf220Q6PDX6 Obox4-ps13-201ENSMUST00000180123 1137 ntBASIC4.91□□□□□ -1.62
Rnf220Q6PDX6 Gm8941-201ENSMUST00000181451 899 ntBASIC4.91□□□□□ -1.62
Rnf220Q6PDX6 Gm26988-201ENSMUST00000183296 945 ntBASIC4.91□□□□□ -1.62
Rnf220Q6PDX6 Gm27233-201ENSMUST00000184030 307 ntBASIC4.91□□□□□ -1.62
Rnf220Q6PDX6 1810044D09Rik-201ENSMUST00000186472 486 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Rnf220Q6PDX6 Gm29045-201ENSMUST00000187278 698 ntBASIC4.91□□□□□ -1.62
Rnf220Q6PDX6 Gm17916-202ENSMUST00000187634 1187 ntBASIC4.91□□□□□ -1.62
Rnf220Q6PDX6 Gm9443-201ENSMUST00000188406 816 ntBASIC4.91□□□□□ -1.62
Rnf220Q6PDX6 Gm37430-201ENSMUST00000193039 196 ntBASIC4.91□□□□□ -1.62
Rnf220Q6PDX6 Gm18900-201ENSMUST00000193218 584 ntBASIC4.91□□□□□ -1.62
Rnf220Q6PDX6 Gm37111-201ENSMUST00000193250 634 ntBASIC4.91□□□□□ -1.62
Rnf220Q6PDX6 Gm412-201ENSMUST00000193360 948 ntBASIC4.91□□□□□ -1.62
Rnf220Q6PDX6 Gm6543-201ENSMUST00000197353 808 ntBASIC4.91□□□□□ -1.62
Rnf220Q6PDX6 1700013M08Rik-201ENSMUST00000197709 683 ntTSL 3 BASIC4.91□□□□□ -1.62
Rnf220Q6PDX6 Gm31752-201ENSMUST00000199456 856 ntTSL 2 BASIC4.91□□□□□ -1.62
Rnf220Q6PDX6 Gm43919-201ENSMUST00000204303 364 ntBASIC4.91□□□□□ -1.62
Rnf220Q6PDX6 Gm8039-201ENSMUST00000204758 712 ntBASIC4.91□□□□□ -1.62
Rnf220Q6PDX6 Gm44910-201ENSMUST00000208451 396 ntBASIC4.91□□□□□ -1.62
Rnf220Q6PDX6 AL603630.1-201ENSMUST00000214781 147 ntBASIC4.91□□□□□ -1.62
Retrieved 100 of 76,532 protein–RNA pairs in 102 ms