Protein–RNA interactions for Protein: Q69ZI1

Sh3rf1, E3 ubiquitin-protein ligase SH3RF1, mousemouse

Predictions only

Length 892 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1Q69ZI1 Gm28225-201ENSMUST00000187730 1499 ntTSL 5 BASIC5.65□□□□□ -1.5
Sh3rf1Q69ZI1 Gm29297-202ENSMUST00000188186 1499 ntTSL 5 BASIC5.65□□□□□ -1.5
Sh3rf1Q69ZI1 Gm28236-203ENSMUST00000188311 1499 ntTSL 5 BASIC5.65□□□□□ -1.5
Sh3rf1Q69ZI1 Gm29070-202ENSMUST00000188541 1499 ntTSL 5 BASIC5.65□□□□□ -1.5
Sh3rf1Q69ZI1 Gm29265-201ENSMUST00000188697 1499 ntTSL 5 BASIC5.65□□□□□ -1.5
Sh3rf1Q69ZI1 Gm28947-203ENSMUST00000188701 1499 ntTSL 5 BASIC5.65□□□□□ -1.5
Sh3rf1Q69ZI1 Gm29616-201ENSMUST00000188777 1499 ntTSL 5 BASIC5.65□□□□□ -1.5
Sh3rf1Q69ZI1 Gm29162-202ENSMUST00000188893 1499 ntTSL 5 BASIC5.65□□□□□ -1.5
Sh3rf1Q69ZI1 Gm28454-203ENSMUST00000190183 1495 ntTSL 5 BASIC5.65□□□□□ -1.5
Sh3rf1Q69ZI1 Gm28842-202ENSMUST00000190289 1499 ntTSL 5 BASIC5.65□□□□□ -1.5
Sh3rf1Q69ZI1 Gm28633-202ENSMUST00000190867 1485 ntTSL 5 BASIC5.65□□□□□ -1.5
Sh3rf1Q69ZI1 Gm28632-202ENSMUST00000191193 1499 ntTSL 5 BASIC5.65□□□□□ -1.5
Sh3rf1Q69ZI1 Gm28245-203ENSMUST00000191551 1495 ntTSL 5 BASIC5.65□□□□□ -1.5
Sh3rf1Q69ZI1 Gm4070-201ENSMUST00000106766 8795 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Sh3rf1Q69ZI1 Gvin1-201ENSMUST00000006667 8795 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Sh3rf1Q69ZI1 Mocs2-213ENSMUST00000184245 4559 ntTSL 5 BASIC5.65□□□□□ -1.5
Sh3rf1Q69ZI1 Gm7792-201ENSMUST00000201555 2473 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
Sh3rf1Q69ZI1 Lrriq1-201ENSMUST00000020043 2542 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Sh3rf1Q69ZI1 Traj40-201ENSMUST00000103702 61 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Sh3rf1Q69ZI1 Gm25919-201ENSMUST00000104271 132 ntBASIC5.65□□□□□ -1.5
Sh3rf1Q69ZI1 Rpl36a-201ENSMUST00000113211 483 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Sh3rf1Q69ZI1 Gm11270-201ENSMUST00000117685 471 ntBASIC5.65□□□□□ -1.5
Sh3rf1Q69ZI1 Gm3943-201ENSMUST00000118606 718 ntBASIC5.65□□□□□ -1.5
Sh3rf1Q69ZI1 Gm13475-201ENSMUST00000119290 234 ntBASIC5.65□□□□□ -1.5
Sh3rf1Q69ZI1 Gm14521-201ENSMUST00000119545 350 ntBASIC5.65□□□□□ -1.5
Sh3rf1Q69ZI1 Gm7363-201ENSMUST00000119883 399 ntBASIC5.65□□□□□ -1.5
Sh3rf1Q69ZI1 Rpl36a-ps4-201ENSMUST00000121019 296 ntBASIC5.65□□□□□ -1.5
Sh3rf1Q69ZI1 Tex50-201ENSMUST00000135643 1192 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
Sh3rf1Q69ZI1 Gm12343-201ENSMUST00000138817 414 ntTSL 3 BASIC5.65□□□□□ -1.5
Sh3rf1Q69ZI1 Gm15700-201ENSMUST00000139791 821 ntTSL 3 BASIC5.65□□□□□ -1.5
Sh3rf1Q69ZI1 Gm25827-201ENSMUST00000157089 107 ntBASIC5.65□□□□□ -1.5
Sh3rf1Q69ZI1 Gm24477-201ENSMUST00000157438 103 ntBASIC5.65□□□□□ -1.5
Sh3rf1Q69ZI1 Gm22916-201ENSMUST00000157616 119 ntBASIC5.65□□□□□ -1.5
Sh3rf1Q69ZI1 Parp4-201ENSMUST00000161553 6387 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
Sh3rf1Q69ZI1 Mrgpra9-202ENSMUST00000179005 1090 ntAPPRIS P2 TSL 5 BASIC5.65□□□□□ -1.5
Sh3rf1Q69ZI1 Gm27660-201ENSMUST00000184028 208 ntBASIC5.65□□□□□ -1.5
Sh3rf1Q69ZI1 Gm29045-201ENSMUST00000187278 698 ntBASIC5.65□□□□□ -1.5
Sh3rf1Q69ZI1 Gm28467-201ENSMUST00000190981 318 ntBASIC5.65□□□□□ -1.5
Sh3rf1Q69ZI1 Gm18444-201ENSMUST00000191239 629 ntBASIC5.65□□□□□ -1.5
Sh3rf1Q69ZI1 2900002M20Rik-201ENSMUST00000195754 330 ntBASIC5.65□□□□□ -1.5
Sh3rf1Q69ZI1 Gm3143-201ENSMUST00000196308 580 ntTSL 3 BASIC5.65□□□□□ -1.5
Sh3rf1Q69ZI1 Gm44494-201ENSMUST00000196760 129 ntBASIC5.65□□□□□ -1.5
Sh3rf1Q69ZI1 Gm43541-201ENSMUST00000197208 581 ntBASIC5.65□□□□□ -1.5
Sh3rf1Q69ZI1 Gm43470-202ENSMUST00000198573 227 ntTSL 3 BASIC5.65□□□□□ -1.5
Sh3rf1Q69ZI1 Gm42961-201ENSMUST00000202023 181 ntBASIC5.65□□□□□ -1.5
Sh3rf1Q69ZI1 Gm2676-201ENSMUST00000207279 606 ntBASIC5.65□□□□□ -1.5
Sh3rf1Q69ZI1 Gm45588-201ENSMUST00000211213 630 ntBASIC5.65□□□□□ -1.5
Sh3rf1Q69ZI1 AC139638.1-201ENSMUST00000218027 364 ntBASIC5.65□□□□□ -1.5
Sh3rf1Q69ZI1 Zfand4-204ENSMUST00000221069 501 ntTSL 3 BASIC5.65□□□□□ -1.5
Sh3rf1Q69ZI1 Fhl5-201ENSMUST00000029922 1106 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Sh3rf1Q69ZI1 Olfr853-201ENSMUST00000058296 918 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Sh3rf1Q69ZI1 Mup13-201ENSMUST00000072678 925 ntAPPRIS ALT2 TSL 2 BASIC5.65□□□□□ -1.5
Sh3rf1Q69ZI1 Defa17-201ENSMUST00000079528 397 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Sh3rf1Q69ZI1 Gm24042-201ENSMUST00000083114 103 ntBASIC5.65□□□□□ -1.5
Sh3rf1Q69ZI1 n-R5s161-201ENSMUST00000083728 114 ntBASIC5.65□□□□□ -1.5
Sh3rf1Q69ZI1 n-R5s27-201ENSMUST00000093699 119 ntBASIC5.65□□□□□ -1.5
Sh3rf1Q69ZI1 Ceacam11-201ENSMUST00000094799 1054 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Sh3rf1Q69ZI1 Dnajc13-203ENSMUST00000186788 6747 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Sh3rf1Q69ZI1 Olfr984-204ENSMUST00000217536 5114 ntAPPRIS P1 TSL 3 BASIC5.65□□□□□ -1.5
Sh3rf1Q69ZI1 Olfr2-205ENSMUST00000214105 5798 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
Sh3rf1Q69ZI1 Hgf-201ENSMUST00000030683 2642 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
Sh3rf1Q69ZI1 Ezh1-201ENSMUST00000100417 3636 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
Sh3rf1Q69ZI1 Mdn1-211ENSMUST00000178134 17959 ntAPPRIS P2 TSL 5 BASIC5.65□□□□□ -1.51
Sh3rf1Q69ZI1 Gm44678-201ENSMUST00000207828 2775 ntBASIC5.65□□□□□ -1.51
Sh3rf1Q69ZI1 Vps41-201ENSMUST00000072961 3199 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
Sh3rf1Q69ZI1 Zfp945-201ENSMUST00000088696 4285 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
Sh3rf1Q69ZI1 Ankar-203ENSMUST00000212573 3952 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
Sh3rf1Q69ZI1 Elmod1-202ENSMUST00000166580 2243 ntAPPRIS ALT1 TSL 5 BASIC5.64□□□□□ -1.51
Sh3rf1Q69ZI1 Gm14929-201ENSMUST00000152079 1850 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Sh3rf1Q69ZI1 9630028B13Rik-201ENSMUST00000143787 3406 ntTSL 2 BASIC5.64□□□□□ -1.51
Sh3rf1Q69ZI1 Gm15713-201ENSMUST00000155900 1546 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Sh3rf1Q69ZI1 Gm8750-201ENSMUST00000173278 1537 ntBASIC5.64□□□□□ -1.51
Sh3rf1Q69ZI1 Gm42551-201ENSMUST00000197701 1573 ntBASIC5.64□□□□□ -1.51
Sh3rf1Q69ZI1 Cdk14-201ENSMUST00000030763 4851 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
Sh3rf1Q69ZI1 Nsun6-201ENSMUST00000028034 2897 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
Sh3rf1Q69ZI1 Cc2d2b-203ENSMUST00000207801 3730 ntTSL 5 BASIC5.64□□□□□ -1.51
Sh3rf1Q69ZI1 Traj16-201ENSMUST00000103725 61 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Sh3rf1Q69ZI1 Gm24886-201ENSMUST00000104384 123 ntBASIC5.64□□□□□ -1.51
Sh3rf1Q69ZI1 Ppih-202ENSMUST00000106317 613 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Sh3rf1Q69ZI1 Gm11032-201ENSMUST00000109941 102 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Sh3rf1Q69ZI1 Scgb1b22-ps-201ENSMUST00000116008 280 ntBASIC5.64□□□□□ -1.51
Sh3rf1Q69ZI1 Vmn1r-ps108-201ENSMUST00000117059 365 ntBASIC5.64□□□□□ -1.51
Sh3rf1Q69ZI1 Gm14558-201ENSMUST00000117458 381 ntBASIC5.64□□□□□ -1.51
Sh3rf1Q69ZI1 Gm11346-201ENSMUST00000118346 704 ntBASIC5.64□□□□□ -1.51
Sh3rf1Q69ZI1 Gm11737-201ENSMUST00000118713 468 ntBASIC5.64□□□□□ -1.51
Sh3rf1Q69ZI1 Gm11699-201ENSMUST00000119016 401 ntBASIC5.64□□□□□ -1.51
Sh3rf1Q69ZI1 Gm16106-201ENSMUST00000119187 294 ntBASIC5.64□□□□□ -1.51
Sh3rf1Q69ZI1 Gm11369-201ENSMUST00000120812 318 ntBASIC5.64□□□□□ -1.51
Sh3rf1Q69ZI1 Gtsf1-202ENSMUST00000123724 747 ntTSL 5 BASIC5.64□□□□□ -1.51
Sh3rf1Q69ZI1 Gm22492-201ENSMUST00000157192 297 ntBASIC5.64□□□□□ -1.51
Sh3rf1Q69ZI1 Gm22867-201ENSMUST00000157499 109 ntBASIC5.64□□□□□ -1.51
Sh3rf1Q69ZI1 Gm26372-201ENSMUST00000157831 236 ntBASIC5.64□□□□□ -1.51
Sh3rf1Q69ZI1 Gm24419-201ENSMUST00000157875 332 ntBASIC5.64□□□□□ -1.51
Sh3rf1Q69ZI1 Gm25982-201ENSMUST00000157920 101 ntBASIC5.64□□□□□ -1.51
Sh3rf1Q69ZI1 Gm24216-201ENSMUST00000158259 117 ntBASIC5.64□□□□□ -1.51
Sh3rf1Q69ZI1 Gm24767-201ENSMUST00000158509 95 ntBASIC5.64□□□□□ -1.51
Sh3rf1Q69ZI1 Gm15970-201ENSMUST00000160623 834 ntBASIC5.64□□□□□ -1.51
Sh3rf1Q69ZI1 Gm3030-201ENSMUST00000163410 516 ntBASIC5.64□□□□□ -1.51
Sh3rf1Q69ZI1 Vmn2r-ps67-201ENSMUST00000172624 385 ntBASIC5.64□□□□□ -1.51
Sh3rf1Q69ZI1 Gm22650-201ENSMUST00000175138 105 ntBASIC5.64□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 74 ms