Protein–RNA interactions for Protein: Q62318

Trim28, Transcription intermediary factor 1-beta, mousemouse

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28Q62318 Gm15656-201ENSMUST00000132076 615 ntTSL 3 BASIC5.85□□□□□ -1.47
Trim28Q62318 Gm16545-201ENSMUST00000161968 463 ntBASIC5.85□□□□□ -1.47
Trim28Q62318 4930558K02Rik-202ENSMUST00000162676 983 ntAPPRIS P1 TSL 3 BASIC5.85□□□□□ -1.47
Trim28Q62318 Rpl31-ps18-201ENSMUST00000180885 377 ntBASIC5.85□□□□□ -1.47
Trim28Q62318 1810022K09Rik-203ENSMUST00000185423 278 ntTSL 3 BASIC5.85□□□□□ -1.47
Trim28Q62318 1700128A07Rik-201ENSMUST00000186311 860 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Trim28Q62318 Smr3a-202ENSMUST00000189633 467 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
Trim28Q62318 1700027A15Rik-205ENSMUST00000191122 332 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Trim28Q62318 Gm28639-201ENSMUST00000191519 481 ntBASIC5.85□□□□□ -1.47
Trim28Q62318 A330074H02Rik-201ENSMUST00000194667 1039 ntBASIC5.85□□□□□ -1.47
Trim28Q62318 Gm37733-201ENSMUST00000195478 2962 ntBASIC5.85□□□□□ -1.47
Trim28Q62318 Gm17951-201ENSMUST00000198536 496 ntBASIC5.85□□□□□ -1.47
Trim28Q62318 Gm45086-201ENSMUST00000209052 462 ntTSL 5 BASIC5.85□□□□□ -1.47
Trim28Q62318 Olfr369-ps1-201ENSMUST00000212589 836 ntBASIC5.85□□□□□ -1.47
Trim28Q62318 CT025625.1-201ENSMUST00000217786 460 ntTSL 5 BASIC5.85□□□□□ -1.47
Trim28Q62318 AC159239.1-201ENSMUST00000221767 603 ntTSL 3 BASIC5.85□□□□□ -1.47
Trim28Q62318 AC166056.1-201ENSMUST00000223139 441 ntTSL 5 BASIC5.85□□□□□ -1.47
Trim28Q62318 Gnrh1-202ENSMUST00000223929 428 ntBASIC5.85□□□□□ -1.47
Trim28Q62318 AC154592.1-201ENSMUST00000225784 574 ntBASIC5.85□□□□□ -1.47
Trim28Q62318 AC118639.1-204ENSMUST00000226401 694 ntBASIC5.85□□□□□ -1.47
Trim28Q62318 Olfr1052-201ENSMUST00000054746 940 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Trim28Q62318 Olfr507-201ENSMUST00000080014 951 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Trim28Q62318 n-R5s196-201ENSMUST00000083136 117 ntBASIC5.85□□□□□ -1.47
Trim28Q62318 Vmn1r194-201ENSMUST00000091737 891 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Trim28Q62318 Olfr390-201ENSMUST00000092919 936 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Trim28Q62318 AC149588.1-201ENSMUST00000228274 3745 ntBASIC5.85□□□□□ -1.47
Trim28Q62318 Gm37668-201ENSMUST00000193745 1944 ntBASIC5.85□□□□□ -1.47
Trim28Q62318 Gm16185-201ENSMUST00000125071 3207 ntTSL 5 BASIC5.85□□□□□ -1.47
Trim28Q62318 Ptprq-201ENSMUST00000050702 7393 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
Trim28Q62318 R3hdm1-201ENSMUST00000036288 4795 ntAPPRIS P2 TSL 5 BASIC5.84□□□□□ -1.47
Trim28Q62318 Olfr963-202ENSMUST00000215649 2203 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Trim28Q62318 Olfr1311-202ENSMUST00000213602 2631 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Trim28Q62318 Gm38374-201ENSMUST00000194417 2033 ntBASIC5.84□□□□□ -1.47
Trim28Q62318 AC121569.1-201ENSMUST00000221043 3666 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Trim28Q62318 Vmn1r42-202ENSMUST00000226436 4045 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
Trim28Q62318 Gm44800-201ENSMUST00000207510 1855 ntBASIC5.84□□□□□ -1.47
Trim28Q62318 Olfr535-203ENSMUST00000213715 5033 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Trim28Q62318 Olfr1507-203ENSMUST00000206062 2803 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.47
Trim28Q62318 Gm25537-201ENSMUST00000103851 109 ntBASIC5.84□□□□□ -1.47
Trim28Q62318 Gm10964-201ENSMUST00000106852 120 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Trim28Q62318 Gm15159-201ENSMUST00000117062 764 ntBASIC5.84□□□□□ -1.47
Trim28Q62318 Gm15854-201ENSMUST00000118879 808 ntBASIC5.84□□□□□ -1.47
Trim28Q62318 Gm14411-201ENSMUST00000121798 914 ntBASIC5.84□□□□□ -1.47
Trim28Q62318 Gm1992-201ENSMUST00000161581 250 ntTSL 3 BASIC5.84□□□□□ -1.47
Trim28Q62318 Mir6414-201ENSMUST00000183685 82 ntBASIC5.84□□□□□ -1.47
Trim28Q62318 Mir6933-201ENSMUST00000184982 81 ntBASIC5.84□□□□□ -1.47
Trim28Q62318 Gm29031-201ENSMUST00000185316 614 ntBASIC5.84□□□□□ -1.47
Trim28Q62318 Gm29000-201ENSMUST00000185444 614 ntBASIC5.84□□□□□ -1.47
Trim28Q62318 Gm28204-201ENSMUST00000185934 614 ntBASIC5.84□□□□□ -1.47
Trim28Q62318 Gm28724-201ENSMUST00000186149 625 ntBASIC5.84□□□□□ -1.47
Trim28Q62318 Gm28290-201ENSMUST00000186505 614 ntBASIC5.84□□□□□ -1.47
Trim28Q62318 Gm28161-201ENSMUST00000186669 614 ntBASIC5.84□□□□□ -1.47
Trim28Q62318 2010005H15Rik-202ENSMUST00000187183 639 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Trim28Q62318 Gm29545-201ENSMUST00000188878 694 ntBASIC5.84□□□□□ -1.47
Trim28Q62318 Gm28749-209ENSMUST00000189599 614 ntBASIC5.84□□□□□ -1.47
Trim28Q62318 Gm33163-201ENSMUST00000194504 614 ntBASIC5.84□□□□□ -1.47
Trim28Q62318 Gm9236-201ENSMUST00000196892 587 ntBASIC5.84□□□□□ -1.47
Trim28Q62318 Gm44145-201ENSMUST00000203711 172 ntTSL 3 BASIC5.84□□□□□ -1.47
Trim28Q62318 Gm8209-201ENSMUST00000206386 553 ntBASIC5.84□□□□□ -1.47
Trim28Q62318 Gm5338-201ENSMUST00000209530 639 ntBASIC5.84□□□□□ -1.47
Trim28Q62318 Gm8556-201ENSMUST00000210437 664 ntBASIC5.84□□□□□ -1.47
Trim28Q62318 Gm45608-201ENSMUST00000210948 389 ntBASIC5.84□□□□□ -1.47
Trim28Q62318 Olfr950-ps1-201ENSMUST00000213804 878 ntBASIC5.84□□□□□ -1.47
Trim28Q62318 Gm39348-202ENSMUST00000217239 375 ntTSL 2 BASIC5.84□□□□□ -1.47
Trim28Q62318 AC157017.1-201ENSMUST00000220148 364 ntBASIC5.84□□□□□ -1.47
Trim28Q62318 CT010480.5-201ENSMUST00000225026 217 ntBASIC5.84□□□□□ -1.47
Trim28Q62318 AC117814.1-201ENSMUST00000226135 352 ntBASIC5.84□□□□□ -1.47
Trim28Q62318 CT025548.1-201ENSMUST00000227459 257 ntBASIC5.84□□□□□ -1.47
Trim28Q62318 Olfr1451-201ENSMUST00000063144 933 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
Trim28Q62318 mt-Tr-201ENSMUST00000082412 68 ntBASIC5.84□□□□□ -1.47
Trim28Q62318 Clca4c-ps-201ENSMUST00000098551 712 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Trim28Q62318 Olfr1282-201ENSMUST00000099618 918 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
Trim28Q62318 Olfr1162-201ENSMUST00000099837 945 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
Trim28Q62318 Gm42455-201ENSMUST00000199761 2736 ntBASIC5.84□□□□□ -1.47
Trim28Q62318 Eya4-208ENSMUST00000220299 3615 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Trim28Q62318 Gm42842-201ENSMUST00000197736 3004 ntBASIC5.84□□□□□ -1.47
Trim28Q62318 Gm15226-201ENSMUST00000156526 2971 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
Trim28Q62318 AC115910.1-201ENSMUST00000221188 4275 ntBASIC5.84□□□□□ -1.48
Trim28Q62318 Gabrg2-201ENSMUST00000070725 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Trim28Q62318 Vmn1r210-202ENSMUST00000226180 3116 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Trim28Q62318 Tnrc6b-201ENSMUST00000067689 17332 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Trim28Q62318 Epha3-201ENSMUST00000064405 5659 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Trim28Q62318 Vmn2r-ps100-201ENSMUST00000221238 1702 ntBASIC5.83□□□□□ -1.48
Trim28Q62318 Zfp26-203ENSMUST00000159569 11276 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Trim28Q62318 Gm44527-202ENSMUST00000204519 1314 ntBASIC5.83□□□□□ -1.48
Trim28Q62318 Abca16-202ENSMUST00000120490 5088 ntAPPRIS P5 TSL 5 BASIC5.83□□□□□ -1.48
Trim28Q62318 Mapk10-204ENSMUST00000112848 6761 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Trim28Q62318 Igkv1-135-201ENSMUST00000103303 394 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Trim28Q62318 Gm7834-201ENSMUST00000117560 437 ntBASIC5.83□□□□□ -1.48
Trim28Q62318 Gm15094-201ENSMUST00000118394 1131 ntBASIC5.83□□□□□ -1.48
Trim28Q62318 Cyp2j7-ps2-201ENSMUST00000119189 179 ntBASIC5.83□□□□□ -1.48
Trim28Q62318 Gm11260-201ENSMUST00000121163 942 ntBASIC5.83□□□□□ -1.48
Trim28Q62318 Gm10059-201ENSMUST00000131139 171 ntBASIC5.83□□□□□ -1.48
Trim28Q62318 Gm29094-201ENSMUST00000138109 664 ntAPPRIS P1 TSL 4 BASIC5.83□□□□□ -1.48
Trim28Q62318 Gm13905-201ENSMUST00000140009 579 ntTSL 3 BASIC5.83□□□□□ -1.48
Trim28Q62318 Gm11861-201ENSMUST00000141571 382 ntTSL 3 BASIC5.83□□□□□ -1.48
Trim28Q62318 Gm23496-201ENSMUST00000157741 248 ntBASIC5.83□□□□□ -1.48
Trim28Q62318 Gm22637-201ENSMUST00000158144 283 ntBASIC5.83□□□□□ -1.48
Trim28Q62318 Gm24002-201ENSMUST00000158456 104 ntBASIC5.83□□□□□ -1.48
Trim28Q62318 Airn-203ENSMUST00000159791 485 ntTSL 3 BASIC5.83□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 87.2 ms