Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Gm15044-201ENSMUST00000120703 598 ntBASIC10.11□□□□□ -0.79
Trim41Q5NCC3 Nell1os-202ENSMUST00000136672 491 ntTSL 5 BASIC10.11□□□□□ -0.79
Trim41Q5NCC3 Gm23465-201ENSMUST00000157134 262 ntBASIC10.11□□□□□ -0.79
Trim41Q5NCC3 Gm23327-201ENSMUST00000157420 78 ntBASIC10.11□□□□□ -0.79
Trim41Q5NCC3 Gm25227-201ENSMUST00000158204 112 ntBASIC10.11□□□□□ -0.79
Trim41Q5NCC3 Gm25643-201ENSMUST00000158874 103 ntBASIC10.11□□□□□ -0.79
Trim41Q5NCC3 Gm28717-201ENSMUST00000189950 315 ntBASIC10.11□□□□□ -0.79
Trim41Q5NCC3 Olfr289-ps1-201ENSMUST00000192834 369 ntBASIC10.11□□□□□ -0.79
Trim41Q5NCC3 Ube2l3-ps1-201ENSMUST00000199777 436 ntBASIC10.11□□□□□ -0.79
Trim41Q5NCC3 Gm7721-201ENSMUST00000200446 546 ntBASIC10.11□□□□□ -0.79
Trim41Q5NCC3 Vmn1r-ps6-202ENSMUST00000202526 135 ntTSL 5 BASIC10.11□□□□□ -0.79
Trim41Q5NCC3 Crs-ps-201ENSMUST00000203723 760 ntBASIC10.11□□□□□ -0.79
Trim41Q5NCC3 Gm45023-201ENSMUST00000207951 379 ntBASIC10.11□□□□□ -0.79
Trim41Q5NCC3 Ss18l2-204ENSMUST00000215104 315 ntTSL 5 BASIC10.11□□□□□ -0.79
Trim41Q5NCC3 AC159256.1-201ENSMUST00000224298 1039 ntBASIC10.11□□□□□ -0.79
Trim41Q5NCC3 Gm10064-201ENSMUST00000071235 399 ntBASIC10.11□□□□□ -0.79
Trim41Q5NCC3 Gm23731-201ENSMUST00000083749 107 ntBASIC10.11□□□□□ -0.79
Trim41Q5NCC3 Fchsd2-202ENSMUST00000098250 4316 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trim41Q5NCC3 Gm44708-201ENSMUST00000205580 2237 ntBASIC10.11□□□□□ -0.79
Trim41Q5NCC3 Gm13648-201ENSMUST00000138361 1536 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Trim41Q5NCC3 Olfr303-203ENSMUST00000215532 3572 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
Trim41Q5NCC3 Rab3c-201ENSMUST00000167824 8444 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trim41Q5NCC3 Utrn-201ENSMUST00000076817 12382 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trim41Q5NCC3 Cenpe-201ENSMUST00000062893 7910 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
Trim41Q5NCC3 Gm42513-201ENSMUST00000197831 2119 ntBASIC10.1□□□□□ -0.79
Trim41Q5NCC3 Gm42892-201ENSMUST00000196227 3973 ntBASIC10.1□□□□□ -0.79
Trim41Q5NCC3 Gm37183-201ENSMUST00000191712 3405 ntBASIC10.1□□□□□ -0.79
Trim41Q5NCC3 Vmn2r61-201ENSMUST00000166131 2598 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
Trim41Q5NCC3 Gm14563-201ENSMUST00000120571 354 ntBASIC10.1□□□□□ -0.79
Trim41Q5NCC3 Gm12434-201ENSMUST00000141580 653 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Trim41Q5NCC3 Gm14093-201ENSMUST00000145579 364 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Trim41Q5NCC3 Gm25334-201ENSMUST00000158036 110 ntBASIC10.1□□□□□ -0.79
Trim41Q5NCC3 Gm22538-201ENSMUST00000158169 299 ntBASIC10.1□□□□□ -0.79
Trim41Q5NCC3 Gm25365-201ENSMUST00000158852 121 ntBASIC10.1□□□□□ -0.79
Trim41Q5NCC3 Trav6-5-202ENSMUST00000183488 335 ntAPPRIS ALT2 BASIC10.1□□□□□ -0.79
Trim41Q5NCC3 Gm28238-201ENSMUST00000188102 383 ntTSL 5 BASIC10.1□□□□□ -0.79
Trim41Q5NCC3 Gm44083-201ENSMUST00000203114 337 ntBASIC10.1□□□□□ -0.79
Trim41Q5NCC3 Gm44132-201ENSMUST00000205142 151 ntBASIC10.1□□□□□ -0.79
Trim41Q5NCC3 B130024G19Rik-205ENSMUST00000207952 485 ntTSL 3 BASIC10.1□□□□□ -0.79
Trim41Q5NCC3 Olfr496-ps1-201ENSMUST00000208862 915 ntBASIC10.1□□□□□ -0.79
Trim41Q5NCC3 AC152415.1-201ENSMUST00000213320 440 ntBASIC10.1□□□□□ -0.79
Trim41Q5NCC3 Gm18541-201ENSMUST00000215935 538 ntBASIC10.1□□□□□ -0.79
Trim41Q5NCC3 CAAA01090811.1-201ENSMUST00000216828 277 ntBASIC10.1□□□□□ -0.79
Trim41Q5NCC3 AC133156.1-202ENSMUST00000227284 363 ntBASIC10.1□□□□□ -0.79
Trim41Q5NCC3 Gm8724-201ENSMUST00000081668 483 ntBASIC10.1□□□□□ -0.79
Trim41Q5NCC3 1700008P02Rik-201ENSMUST00000091364 783 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trim41Q5NCC3 Gm7145-201ENSMUST00000185381 1794 ntAPPRIS P1 TSL 3 BASIC10.1□□□□□ -0.79
Trim41Q5NCC3 Atf2-206ENSMUST00000112016 3943 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Trim41Q5NCC3 Lpin2-203ENSMUST00000126681 4167 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Trim41Q5NCC3 AC144733.2-201ENSMUST00000222552 2292 ntBASIC10.1□□□□□ -0.79
Trim41Q5NCC3 Nusap1-201ENSMUST00000028771 3526 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trim41Q5NCC3 Themis-203ENSMUST00000105516 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trim41Q5NCC3 Pigb-201ENSMUST00000093819 2866 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Trim41Q5NCC3 Il21-201ENSMUST00000029273 3072 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trim41Q5NCC3 Adam4-201ENSMUST00000085319 2504 ntAPPRIS P1 BASIC10.09□□□□□ -0.79
Trim41Q5NCC3 4732416N19Rik-201ENSMUST00000203932 3479 ntBASIC10.09□□□□□ -0.79
Trim41Q5NCC3 Gm10030-203ENSMUST00000197321 3824 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Trim41Q5NCC3 Bmpr1b-204ENSMUST00000106232 4164 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trim41Q5NCC3 G530011O06Rik-201ENSMUST00000154810 2380 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Trim41Q5NCC3 Olfr744-203ENSMUST00000216690 1765 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
Trim41Q5NCC3 Phf6-203ENSMUST00000154864 3057 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Trim41Q5NCC3 Vmn2r62-201ENSMUST00000169130 2580 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
Trim41Q5NCC3 Ranbp17-201ENSMUST00000037522 3950 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trim41Q5NCC3 Adam34-202ENSMUST00000212185 2335 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trim41Q5NCC3 Gm14125-201ENSMUST00000113442 680 ntBASIC10.09□□□□□ -0.79
Trim41Q5NCC3 Gm23879-201ENSMUST00000116874 126 ntBASIC10.09□□□□□ -0.79
Trim41Q5NCC3 Gm12654-201ENSMUST00000120387 587 ntBASIC10.09□□□□□ -0.79
Trim41Q5NCC3 Snora15-201ENSMUST00000177461 131 ntBASIC10.09□□□□□ -0.79
Trim41Q5NCC3 1110046J04Rik-203ENSMUST00000181800 777 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Trim41Q5NCC3 Gm26871-205ENSMUST00000181926 742 ntTSL 3 BASIC10.09□□□□□ -0.79
Trim41Q5NCC3 Gm29327-201ENSMUST00000188229 388 ntTSL 5 BASIC10.09□□□□□ -0.79
Trim41Q5NCC3 Gm18403-201ENSMUST00000192907 529 ntBASIC10.09□□□□□ -0.79
Trim41Q5NCC3 Fkbp1b-202ENSMUST00000219880 246 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Trim41Q5NCC3 Gm46997-201ENSMUST00000222108 217 ntBASIC10.09□□□□□ -0.79
Trim41Q5NCC3 AV026068-237ENSMUST00000226075 572 ntBASIC10.09□□□□□ -0.79
Trim41Q5NCC3 AC139758.1-201ENSMUST00000226573 930 ntBASIC10.09□□□□□ -0.79
Trim41Q5NCC3 Gm4963-201ENSMUST00000072718 378 ntBASIC10.09□□□□□ -0.79
Trim41Q5NCC3 Defb25-201ENSMUST00000099203 293 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trim41Q5NCC3 Olfr965-202ENSMUST00000213335 1700 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
Trim41Q5NCC3 Nuf2-202ENSMUST00000111368 2405 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trim41Q5NCC3 Ube2u-201ENSMUST00000092730 1435 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Trim41Q5NCC3 Gm14033-201ENSMUST00000128307 2265 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Trim41Q5NCC3 Arsk-201ENSMUST00000120573 3657 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trim41Q5NCC3 Traj46-201ENSMUST00000103696 63 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
Trim41Q5NCC3 Gm14744-201ENSMUST00000114039 800 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trim41Q5NCC3 4930597A21Rik-201ENSMUST00000128652 698 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Trim41Q5NCC3 Lgals1-ps1-201ENSMUST00000173500 368 ntBASIC10.08□□□□□ -0.8
Trim41Q5NCC3 Gm6712-202ENSMUST00000186431 526 ntTSL 5 BASIC10.08□□□□□ -0.8
Trim41Q5NCC3 Gm28506-201ENSMUST00000189937 150 ntBASIC10.08□□□□□ -0.8
Trim41Q5NCC3 Igkv11-114-201ENSMUST00000200013 346 ntBASIC10.08□□□□□ -0.8
Trim41Q5NCC3 Gm43500-201ENSMUST00000201067 312 ntTSL 5 BASIC10.08□□□□□ -0.8
Trim41Q5NCC3 Vmn1r13-201ENSMUST00000078885 903 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
Trim41Q5NCC3 Trmt10a-201ENSMUST00000040321 4025 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trim41Q5NCC3 Olfr1381-202ENSMUST00000213256 4954 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
Trim41Q5NCC3 Olfr1278-203ENSMUST00000213727 6744 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
Trim41Q5NCC3 A330015K06Rik-202ENSMUST00000195685 2196 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Trim41Q5NCC3 Gm37278-201ENSMUST00000191619 2872 ntBASIC10.08□□□□□ -0.8
Trim41Q5NCC3 AC154184.1-201ENSMUST00000224375 1620 ntBASIC10.07□□□□□ -0.8
Trim41Q5NCC3 Omd-202ENSMUST00000221170 2249 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trim41Q5NCC3 Gm26514-201ENSMUST00000181087 4231 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 145 ms