Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Gm14352-201ENSMUST00000119250 449 ntBASIC4.16□□□□□ -1.74
Upf3bQ3ULL6 Gm8757-201ENSMUST00000119660 372 ntBASIC4.16□□□□□ -1.74
Upf3bQ3ULL6 Gm11350-201ENSMUST00000121436 870 ntBASIC4.16□□□□□ -1.74
Upf3bQ3ULL6 Gm11534-201ENSMUST00000125956 204 ntTSL 3 BASIC4.16□□□□□ -1.74
Upf3bQ3ULL6 Gm12278-201ENSMUST00000153718 407 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
Upf3bQ3ULL6 Gm25150-201ENSMUST00000157121 60 ntBASIC4.16□□□□□ -1.74
Upf3bQ3ULL6 Gm23960-201ENSMUST00000157206 131 ntBASIC4.16□□□□□ -1.74
Upf3bQ3ULL6 Gm16303-201ENSMUST00000161498 390 ntBASIC4.16□□□□□ -1.74
Upf3bQ3ULL6 Gm20476-201ENSMUST00000172644 492 ntTSL 2 BASIC4.16□□□□□ -1.74
Upf3bQ3ULL6 Gm5726-201ENSMUST00000173886 924 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
Upf3bQ3ULL6 Gm8677-201ENSMUST00000174637 924 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
Upf3bQ3ULL6 Gm4035-201ENSMUST00000189445 399 ntTSL 3 BASIC4.16□□□□□ -1.74
Upf3bQ3ULL6 1700113H08Rik-203ENSMUST00000189775 798 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
Upf3bQ3ULL6 Gm18529-201ENSMUST00000193025 1257 ntBASIC4.16□□□□□ -1.74
Upf3bQ3ULL6 Gm43356-201ENSMUST00000196582 609 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
Upf3bQ3ULL6 Gm4248-201ENSMUST00000196905 316 ntBASIC4.16□□□□□ -1.74
Upf3bQ3ULL6 Olfr1473-ps1-201ENSMUST00000207135 958 ntBASIC4.16□□□□□ -1.74
Upf3bQ3ULL6 AC132384.13-201ENSMUST00000219556 1159 ntBASIC4.16□□□□□ -1.74
Upf3bQ3ULL6 Gm4057-201ENSMUST00000221407 368 ntBASIC4.16□□□□□ -1.74
Upf3bQ3ULL6 Olfr782-201ENSMUST00000077024 945 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
Upf3bQ3ULL6 mt-Nd4l-201ENSMUST00000084013 297 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
Upf3bQ3ULL6 Gm6361-201ENSMUST00000091031 435 ntBASIC4.16□□□□□ -1.74
Upf3bQ3ULL6 Dnah7b-201ENSMUST00000069293 12314 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
Upf3bQ3ULL6 Olfr1369-ps1-203ENSMUST00000213922 3930 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
Upf3bQ3ULL6 Vmn1r36-203ENSMUST00000226728 1458 ntBASIC4.16□□□□□ -1.74
Upf3bQ3ULL6 Gm732-201ENSMUST00000101290 1661 ntAPPRIS P2 TSL 1 (best) BASIC4.16□□□□□ -1.74
Upf3bQ3ULL6 Olfr354-202ENSMUST00000217479 9539 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.74
Upf3bQ3ULL6 Vmn2r-ps47-201ENSMUST00000174515 2557 ntBASIC4.15□□□□□ -1.74
Upf3bQ3ULL6 Gm37742-201ENSMUST00000193263 3979 ntBASIC4.15□□□□□ -1.74
Upf3bQ3ULL6 Erbin-207ENSMUST00000191275 5552 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.74
Upf3bQ3ULL6 Gm14325-201ENSMUST00000108939 1576 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.74
Upf3bQ3ULL6 Vmn2r32-201ENSMUST00000094866 3513 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.74
Upf3bQ3ULL6 2310057J18Rik-202ENSMUST00000140558 1445 ntTSL 5 BASIC4.15□□□□□ -1.74
Upf3bQ3ULL6 BC002059-202ENSMUST00000190415 1964 ntTSL 2 BASIC4.15□□□□□ -1.74
Upf3bQ3ULL6 P2ry10-201ENSMUST00000053375 2888 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
Upf3bQ3ULL6 Trdv5-201ENSMUST00000103685 438 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
Upf3bQ3ULL6 Gm11673-201ENSMUST00000117846 331 ntBASIC4.15□□□□□ -1.75
Upf3bQ3ULL6 Gm5942-201ENSMUST00000120046 439 ntBASIC4.15□□□□□ -1.75
Upf3bQ3ULL6 Gm15120-201ENSMUST00000120602 301 ntBASIC4.15□□□□□ -1.75
Upf3bQ3ULL6 Gm11692-201ENSMUST00000122121 902 ntBASIC4.15□□□□□ -1.75
Upf3bQ3ULL6 Gm25843-201ENSMUST00000122582 314 ntBASIC4.15□□□□□ -1.75
Upf3bQ3ULL6 Gm15597-201ENSMUST00000145924 1050 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
Upf3bQ3ULL6 Gm24014-201ENSMUST00000157728 157 ntBASIC4.15□□□□□ -1.75
Upf3bQ3ULL6 Gm26362-201ENSMUST00000158865 315 ntBASIC4.15□□□□□ -1.75
Upf3bQ3ULL6 Gm6625-201ENSMUST00000177870 272 ntBASIC4.15□□□□□ -1.75
Upf3bQ3ULL6 9330185C12Rik-201ENSMUST00000180837 1009 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
Upf3bQ3ULL6 Gm21232-201ENSMUST00000182187 1006 ntBASIC4.15□□□□□ -1.75
Upf3bQ3ULL6 Gm27044-201ENSMUST00000183033 796 ntBASIC4.15□□□□□ -1.75
Upf3bQ3ULL6 9430092D12Rik-201ENSMUST00000194937 1274 ntBASIC4.15□□□□□ -1.75
Upf3bQ3ULL6 Gm26691-203ENSMUST00000200444 479 ntTSL 3 BASIC4.15□□□□□ -1.75
Upf3bQ3ULL6 C78283-201ENSMUST00000202711 848 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
Upf3bQ3ULL6 Gm6240-201ENSMUST00000208014 473 ntBASIC4.15□□□□□ -1.75
Upf3bQ3ULL6 Gm45533-201ENSMUST00000210295 165 ntTSL 5 BASIC4.15□□□□□ -1.75
Upf3bQ3ULL6 AC132384.5-201ENSMUST00000218562 226 ntBASIC4.15□□□□□ -1.75
Upf3bQ3ULL6 Olfr469-201ENSMUST00000075704 945 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
Upf3bQ3ULL6 Gm23443-201ENSMUST00000082916 128 ntBASIC4.15□□□□□ -1.75
Upf3bQ3ULL6 Gm22868-201ENSMUST00000083955 164 ntBASIC4.15□□□□□ -1.75
Upf3bQ3ULL6 Olfr360-202ENSMUST00000216706 1816 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
Upf3bQ3ULL6 Gm32061-201ENSMUST00000207232 3478 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
Upf3bQ3ULL6 1810006J02Rik-201ENSMUST00000186473 1687 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
Upf3bQ3ULL6 Vmn2r-ps49-201ENSMUST00000173160 3551 ntBASIC4.15□□□□□ -1.75
Upf3bQ3ULL6 Fam46d-204ENSMUST00000167154 3004 ntAPPRIS P1 TSL 3 BASIC4.15□□□□□ -1.75
Upf3bQ3ULL6 Gm37407-201ENSMUST00000194793 1316 ntBASIC4.15□□□□□ -1.75
Upf3bQ3ULL6 Dst-203ENSMUST00000115104 23279 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.75
Upf3bQ3ULL6 Gm5590-202ENSMUST00000186976 2315 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
Upf3bQ3ULL6 Nlrp4f-201ENSMUST00000037372 3527 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
Upf3bQ3ULL6 Olfr1277-202ENSMUST00000214760 5944 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
Upf3bQ3ULL6 Erbb4-201ENSMUST00000119142 11782 ntAPPRIS ALT1 TSL 5 BASIC4.14□□□□□ -1.75
Upf3bQ3ULL6 4930415L06Rik-201ENSMUST00000088146 2617 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Upf3bQ3ULL6 Mmp1b-201ENSMUST00000047888 1449 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Upf3bQ3ULL6 Abi3bp-204ENSMUST00000171000 3877 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
Upf3bQ3ULL6 Gm22758-201ENSMUST00000102275 96 ntBASIC4.14□□□□□ -1.75
Upf3bQ3ULL6 Gm15785-201ENSMUST00000119145 694 ntBASIC4.14□□□□□ -1.75
Upf3bQ3ULL6 Gm15225-201ENSMUST00000120449 1017 ntBASIC4.14□□□□□ -1.75
Upf3bQ3ULL6 Gm15885-201ENSMUST00000122114 388 ntBASIC4.14□□□□□ -1.75
Upf3bQ3ULL6 4930405D11Rik-201ENSMUST00000132218 568 ntTSL 3 BASIC4.14□□□□□ -1.75
Upf3bQ3ULL6 Gm5924-201ENSMUST00000132554 871 ntBASIC4.14□□□□□ -1.75
Upf3bQ3ULL6 Gm26148-201ENSMUST00000157430 68 ntBASIC4.14□□□□□ -1.75
Upf3bQ3ULL6 Gm22588-201ENSMUST00000157510 140 ntBASIC4.14□□□□□ -1.75
Upf3bQ3ULL6 Gm22889-201ENSMUST00000158639 58 ntBASIC4.14□□□□□ -1.75
Upf3bQ3ULL6 Vmn2r-ps74-201ENSMUST00000174705 917 ntBASIC4.14□□□□□ -1.75
Upf3bQ3ULL6 Gm27153-201ENSMUST00000184492 407 ntTSL 2 BASIC4.14□□□□□ -1.75
Upf3bQ3ULL6 4930433B08Rik-201ENSMUST00000192010 644 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
Upf3bQ3ULL6 Gm42567-201ENSMUST00000199268 352 ntTSL 3 BASIC4.14□□□□□ -1.75
Upf3bQ3ULL6 Tshb-206ENSMUST00000200041 537 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
Upf3bQ3ULL6 Gm2762-205ENSMUST00000202366 356 ntTSL 3 BASIC4.14□□□□□ -1.75
Upf3bQ3ULL6 2500002B13Rik-202ENSMUST00000210752 298 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
Upf3bQ3ULL6 AC132315.1-201ENSMUST00000221771 390 ntBASIC4.14□□□□□ -1.75
Upf3bQ3ULL6 CT025536.1-201ENSMUST00000226744 844 ntBASIC4.14□□□□□ -1.75
Upf3bQ3ULL6 Gm10042-201ENSMUST00000079884 78 ntBASIC4.14□□□□□ -1.75
Upf3bQ3ULL6 Olfr1037-201ENSMUST00000099911 1125 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
Upf3bQ3ULL6 Olfr1031-202ENSMUST00000216807 1946 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
Upf3bQ3ULL6 Efhc2-201ENSMUST00000026014 2554 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Upf3bQ3ULL6 AC154677.1-201ENSMUST00000227636 2805 ntBASIC4.14□□□□□ -1.75
Upf3bQ3ULL6 Gm44525-201ENSMUST00000183129 2634 ntBASIC4.13□□□□□ -1.75
Upf3bQ3ULL6 Olfr213-202ENSMUST00000220008 4020 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
Upf3bQ3ULL6 Olfr725-202ENSMUST00000206920 1519 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
Upf3bQ3ULL6 Gm23271-201ENSMUST00000104052 124 ntBASIC4.13□□□□□ -1.75
Upf3bQ3ULL6 Gm14816-201ENSMUST00000117174 294 ntBASIC4.13□□□□□ -1.75
Upf3bQ3ULL6 Gm13831-201ENSMUST00000118764 302 ntBASIC4.13□□□□□ -1.75
Retrieved 100 of 76,532 protein–RNA pairs in 85.2 ms