Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 4930540M03Rik-201ENSMUST00000216952 437 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
Nkx3-1P97436 AC155266.1-201ENSMUST00000220762 904 ntBASIC3.42□□□□□ -1.86
Nkx3-1P97436 Gm40658-203ENSMUST00000222210 1070 ntTSL 5 BASIC3.42□□□□□ -1.86
Nkx3-1P97436 Vmn1r89-206ENSMUST00000227319 985 ntBASIC3.42□□□□□ -1.86
Nkx3-1P97436 Olfr173-201ENSMUST00000049940 1164 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
Nkx3-1P97436 Zfp825-201ENSMUST00000074369 822 ntTSL 5 BASIC3.42□□□□□ -1.86
Nkx3-1P97436 Olfr713-201ENSMUST00000098139 975 ntBASIC3.42□□□□□ -1.86
Nkx3-1P97436 Cr2-212ENSMUST00000210219 4227 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
Nkx3-1P97436 Dst-203ENSMUST00000115104 23279 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
Nkx3-1P97436 C230031I18Rik-201ENSMUST00000197856 3698 ntBASIC3.42□□□□□ -1.86
Nkx3-1P97436 Zfp131-202ENSMUST00000178271 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.42□□□□□ -1.86
Nkx3-1P97436 Olfr905-202ENSMUST00000214377 4429 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
Nkx3-1P97436 Gm42486-201ENSMUST00000200369 3486 ntBASIC3.41□□□□□ -1.86
Nkx3-1P97436 Gm42537-201ENSMUST00000198260 2574 ntBASIC3.41□□□□□ -1.86
Nkx3-1P97436 Gm37789-201ENSMUST00000192862 2889 ntBASIC3.41□□□□□ -1.86
Nkx3-1P97436 Gm25765-201ENSMUST00000104100 132 ntBASIC3.41□□□□□ -1.86
Nkx3-1P97436 Cd59b-204ENSMUST00000111132 436 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
Nkx3-1P97436 Gm8757-201ENSMUST00000119660 372 ntBASIC3.41□□□□□ -1.86
Nkx3-1P97436 Gm11325-201ENSMUST00000119967 469 ntBASIC3.41□□□□□ -1.86
Nkx3-1P97436 Gm3160-201ENSMUST00000128343 607 ntBASIC3.41□□□□□ -1.86
Nkx3-1P97436 4930556G01Rik-201ENSMUST00000128925 891 ntTSL 5 BASIC3.41□□□□□ -1.86
Nkx3-1P97436 Gm13307-201ENSMUST00000141375 493 ntTSL 5 BASIC3.41□□□□□ -1.86
Nkx3-1P97436 Gm23385-201ENSMUST00000158592 295 ntBASIC3.41□□□□□ -1.86
Nkx3-1P97436 Gm26005-201ENSMUST00000158802 134 ntBASIC3.41□□□□□ -1.86
Nkx3-1P97436 Vmn2r-ps74-201ENSMUST00000174705 917 ntBASIC3.41□□□□□ -1.86
Nkx3-1P97436 Obox4-ps15-201ENSMUST00000178057 1140 ntBASIC3.41□□□□□ -1.86
Nkx3-1P97436 Obox4-ps19-201ENSMUST00000178284 1140 ntBASIC3.41□□□□□ -1.86
Nkx3-1P97436 Obox4-ps20-201ENSMUST00000179591 1140 ntBASIC3.41□□□□□ -1.86
Nkx3-1P97436 Gm8298-201ENSMUST00000179799 1206 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
Nkx3-1P97436 Obox4-ps21-201ENSMUST00000179856 1140 ntBASIC3.41□□□□□ -1.86
Nkx3-1P97436 Gm29598-201ENSMUST00000188996 588 ntBASIC3.41□□□□□ -1.86
Nkx3-1P97436 Gm29552-201ENSMUST00000190548 660 ntBASIC3.41□□□□□ -1.86
Nkx3-1P97436 Gm37603-201ENSMUST00000192368 219 ntBASIC3.41□□□□□ -1.86
Nkx3-1P97436 Gm37164-201ENSMUST00000192809 637 ntBASIC3.41□□□□□ -1.86
Nkx3-1P97436 Gm28724-202ENSMUST00000194218 295 ntBASIC3.41□□□□□ -1.86
Nkx3-1P97436 Gm43356-201ENSMUST00000196582 609 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
Nkx3-1P97436 Gm567-201ENSMUST00000197127 469 ntTSL 3 BASIC3.41□□□□□ -1.86
Nkx3-1P97436 Gm8774-201ENSMUST00000203621 692 ntBASIC3.41□□□□□ -1.86
Nkx3-1P97436 Gm44176-201ENSMUST00000204336 276 ntTSL 5 BASIC3.41□□□□□ -1.86
Nkx3-1P97436 Gm44611-201ENSMUST00000207507 355 ntBASIC3.41□□□□□ -1.86
Nkx3-1P97436 Gm44681-201ENSMUST00000208447 842 ntBASIC3.41□□□□□ -1.86
Nkx3-1P97436 AC113291.1-201ENSMUST00000217557 403 ntTSL 3 BASIC3.41□□□□□ -1.86
Nkx3-1P97436 AC160865.1-201ENSMUST00000219873 151 ntBASIC3.41□□□□□ -1.86
Nkx3-1P97436 AC154441.1-201ENSMUST00000223653 1006 ntBASIC3.41□□□□□ -1.86
Nkx3-1P97436 AC124524.2-201ENSMUST00000223940 588 ntBASIC3.41□□□□□ -1.86
Nkx3-1P97436 AC154738.2-201ENSMUST00000227403 1110 ntBASIC3.41□□□□□ -1.86
Nkx3-1P97436 AC121898.1-201ENSMUST00000227599 288 ntBASIC3.41□□□□□ -1.86
Nkx3-1P97436 AC080021.1-201ENSMUST00000228104 700 ntBASIC3.41□□□□□ -1.86
Nkx3-1P97436 Spink1-201ENSMUST00000025381 422 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
Nkx3-1P97436 Olfr924-201ENSMUST00000072977 927 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
Nkx3-1P97436 n-R5s166-201ENSMUST00000082898 121 ntBASIC3.41□□□□□ -1.86
Nkx3-1P97436 A830011K09Rik-202ENSMUST00000162868 2201 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
Nkx3-1P97436 Olfr213-202ENSMUST00000220008 4020 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
Nkx3-1P97436 Olfr330-202ENSMUST00000213188 2836 ntAPPRIS P1 TSL 2 BASIC3.41□□□□□ -1.86
Nkx3-1P97436 Fbxw28-204ENSMUST00000200156 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
Nkx3-1P97436 AC159193.2-201ENSMUST00000220865 4251 ntBASIC3.41□□□□□ -1.86
Nkx3-1P97436 Zfp942-201ENSMUST00000074295 1461 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
Nkx3-1P97436 Csmd3-204ENSMUST00000160658 12460 ntTSL 5 BASIC3.41□□□□□ -1.86
Nkx3-1P97436 Olfr1042-202ENSMUST00000215624 5096 ntAPPRIS P1 BASIC3.4□□□□□ -1.86
Nkx3-1P97436 Gm43327-201ENSMUST00000199285 4055 ntBASIC3.4□□□□□ -1.86
Nkx3-1P97436 Vmn1r185-213ENSMUST00000228676 5199 ntAPPRIS P1 BASIC3.4□□□□□ -1.86
Nkx3-1P97436 Cdc27-203ENSMUST00000106962 3160 ntTSL 5 BASIC3.4□□□□□ -1.86
Nkx3-1P97436 Erbin-207ENSMUST00000191275 5552 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.87
Nkx3-1P97436 Gm24318-201ENSMUST00000104490 131 ntBASIC3.4□□□□□ -1.87
Nkx3-1P97436 Gm13755-201ENSMUST00000118509 305 ntBASIC3.4□□□□□ -1.87
Nkx3-1P97436 Gm15268-201ENSMUST00000118845 352 ntBASIC3.4□□□□□ -1.87
Nkx3-1P97436 Gm15403-201ENSMUST00000119343 1227 ntBASIC3.4□□□□□ -1.87
Nkx3-1P97436 Hmgb1-ps1-201ENSMUST00000119350 634 ntBASIC3.4□□□□□ -1.87
Nkx3-1P97436 Gm14875-201ENSMUST00000120881 319 ntBASIC3.4□□□□□ -1.87
Nkx3-1P97436 Defa-ps5-201ENSMUST00000121541 279 ntBASIC3.4□□□□□ -1.87
Nkx3-1P97436 Gm15461-201ENSMUST00000143488 235 ntTSL 3 BASIC3.4□□□□□ -1.87
Nkx3-1P97436 Gm26187-201ENSMUST00000157693 101 ntBASIC3.4□□□□□ -1.87
Nkx3-1P97436 Gm22840-201ENSMUST00000158444 136 ntBASIC3.4□□□□□ -1.87
Nkx3-1P97436 Gm26028-201ENSMUST00000158660 294 ntBASIC3.4□□□□□ -1.87
Nkx3-1P97436 Il1rl1-205ENSMUST00000174335 1216 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
Nkx3-1P97436 Gm21232-201ENSMUST00000182187 1006 ntBASIC3.4□□□□□ -1.87
Nkx3-1P97436 Gm40394-201ENSMUST00000221321 633 ntTSL 5 BASIC3.4□□□□□ -1.87
Nkx3-1P97436 AC154368.1-201ENSMUST00000223465 205 ntTSL 5 BASIC3.4□□□□□ -1.87
Nkx3-1P97436 AC133517.1-202ENSMUST00000224409 233 ntBASIC3.4□□□□□ -1.87
Nkx3-1P97436 AC166095.1-203ENSMUST00000224591 233 ntBASIC3.4□□□□□ -1.87
Nkx3-1P97436 AL672194.1-201ENSMUST00000224841 603 ntBASIC3.4□□□□□ -1.87
Nkx3-1P97436 CT009711.3-201ENSMUST00000225882 250 ntBASIC3.4□□□□□ -1.87
Nkx3-1P97436 CT025536.1-201ENSMUST00000226744 844 ntBASIC3.4□□□□□ -1.87
Nkx3-1P97436 AC115291.2-201ENSMUST00000228335 437 ntBASIC3.4□□□□□ -1.87
Nkx3-1P97436 Olfr1018-201ENSMUST00000054201 936 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
Nkx3-1P97436 Tas2r102-201ENSMUST00000069268 1044 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
Nkx3-1P97436 Gm26449-201ENSMUST00000082452 104 ntBASIC3.4□□□□□ -1.87
Nkx3-1P97436 Olfr1218-201ENSMUST00000099798 936 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
Nkx3-1P97436 Vmn1r46-204ENSMUST00000228231 13338 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
Nkx3-1P97436 Gm43313-201ENSMUST00000201398 2235 ntBASIC3.4□□□□□ -1.87
Nkx3-1P97436 Gm43824-201ENSMUST00000199042 2588 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
Nkx3-1P97436 Olfr919-202ENSMUST00000215612 1992 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.87
Nkx3-1P97436 Gm42447-201ENSMUST00000200102 2903 ntBASIC3.4□□□□□ -1.87
Nkx3-1P97436 Gm43826-201ENSMUST00000199604 2612 ntBASIC3.4□□□□□ -1.87
Nkx3-1P97436 Zfp616-201ENSMUST00000074813 5014 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
Nkx3-1P97436 Olfr203-202ENSMUST00000215893 1521 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Nkx3-1P97436 AC154677.1-201ENSMUST00000227636 2805 ntBASIC3.39□□□□□ -1.87
Nkx3-1P97436 Klhl13-205ENSMUST00000115319 3349 ntAPPRIS P2 TSL 1 (best) BASIC3.39□□□□□ -1.87
Nkx3-1P97436 Hfm1-202ENSMUST00000117588 4870 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Nkx3-1P97436 Vmn1r52-205ENSMUST00000227893 3108 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 88.1 ms