Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Gm43065-201ENSMUST00000198971 2092 ntBASIC4.27□□□□□ -1.73
Col2a1P28481 Jrkl-201ENSMUST00000110582 3223 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Col2a1P28481 Polk-202ENSMUST00000091387 2382 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Col2a1P28481 Olfr476-202ENSMUST00000217173 2539 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Col2a1P28481 Vmn1r184-206ENSMUST00000228145 5888 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Col2a1P28481 Abi3bp-204ENSMUST00000171000 3877 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
Col2a1P28481 Vmn2r-ps36-201ENSMUST00000172589 2562 ntBASIC4.26□□□□□ -1.73
Col2a1P28481 Zfp799-201ENSMUST00000179695 5833 ntTSL 3 BASIC4.26□□□□□ -1.73
Col2a1P28481 Nfia-205ENSMUST00000107062 9239 ntTSL 5 BASIC4.26□□□□□ -1.73
Col2a1P28481 Gm24608-201ENSMUST00000104381 136 ntBASIC4.26□□□□□ -1.73
Col2a1P28481 Gm15387-201ENSMUST00000120421 648 ntBASIC4.26□□□□□ -1.73
Col2a1P28481 n-R5s45-201ENSMUST00000122592 110 ntBASIC4.26□□□□□ -1.73
Col2a1P28481 Gm24380-201ENSMUST00000122696 324 ntBASIC4.26□□□□□ -1.73
Col2a1P28481 Olfr1177-ps-201ENSMUST00000137895 921 ntAPPRIS ALT2 BASIC4.26□□□□□ -1.73
Col2a1P28481 4930406D18Rik-202ENSMUST00000152827 657 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Col2a1P28481 Gm22890-201ENSMUST00000158642 144 ntBASIC4.26□□□□□ -1.73
Col2a1P28481 Gm23773-201ENSMUST00000158985 296 ntBASIC4.26□□□□□ -1.73
Col2a1P28481 Gm4540-201ENSMUST00000170669 429 ntBASIC4.26□□□□□ -1.73
Col2a1P28481 Hmgb1-ps7-201ENSMUST00000173370 648 ntBASIC4.26□□□□□ -1.73
Col2a1P28481 Gm6900-201ENSMUST00000178971 342 ntBASIC4.26□□□□□ -1.73
Col2a1P28481 Gm27022-201ENSMUST00000183225 715 ntTSL 3 BASIC4.26□□□□□ -1.73
Col2a1P28481 1810022K09Rik-203ENSMUST00000185423 278 ntTSL 3 BASIC4.26□□□□□ -1.73
Col2a1P28481 Gm28655-201ENSMUST00000191538 692 ntBASIC4.26□□□□□ -1.73
Col2a1P28481 Gm44800-201ENSMUST00000207510 1855 ntBASIC4.26□□□□□ -1.73
Col2a1P28481 Gm5185-201ENSMUST00000080271 619 ntBASIC4.26□□□□□ -1.73
Col2a1P28481 Gm22739-201ENSMUST00000083437 160 ntBASIC4.26□□□□□ -1.73
Col2a1P28481 Gm5518-201ENSMUST00000084171 648 ntBASIC4.26□□□□□ -1.73
Col2a1P28481 Defb33-201ENSMUST00000098908 424 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
Col2a1P28481 Stard9-207ENSMUST00000180041 15102 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Col2a1P28481 Vmn2r35-201ENSMUST00000169683 2586 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Col2a1P28481 Peli1-202ENSMUST00000101477 3703 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Col2a1P28481 Olfr1368-202ENSMUST00000216039 1389 ntAPPRIS P1 TSL 3 BASIC4.26□□□□□ -1.73
Col2a1P28481 Gm38374-201ENSMUST00000194417 2033 ntBASIC4.26□□□□□ -1.73
Col2a1P28481 3110080E11Rik-201ENSMUST00000210736 3477 ntBASIC4.25□□□□□ -1.73
Col2a1P28481 Igkv7-33-201ENSMUST00000103376 362 ntAPPRIS ALT2 BASIC4.25□□□□□ -1.73
Col2a1P28481 Gm12982-201ENSMUST00000117408 190 ntBASIC4.25□□□□□ -1.73
Col2a1P28481 Klrc2-203ENSMUST00000118401 707 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
Col2a1P28481 Gm12873-201ENSMUST00000119988 422 ntBASIC4.25□□□□□ -1.73
Col2a1P28481 Gm12543-201ENSMUST00000120410 543 ntBASIC4.25□□□□□ -1.73
Col2a1P28481 2610001J05Rik-202ENSMUST00000155856 1077 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Col2a1P28481 Mir5128-201ENSMUST00000175217 84 ntBASIC4.25□□□□□ -1.73
Col2a1P28481 Rbm46-203ENSMUST00000182818 2115 ntTSL 5 BASIC4.25□□□□□ -1.73
Col2a1P28481 2210017I01Rik-201ENSMUST00000195278 822 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Col2a1P28481 Gm42610-201ENSMUST00000196557 650 ntTSL 3 BASIC4.25□□□□□ -1.73
Col2a1P28481 AC155923.1-201ENSMUST00000215676 356 ntBASIC4.25□□□□□ -1.73
Col2a1P28481 AC155237.2-201ENSMUST00000228487 478 ntBASIC4.25□□□□□ -1.73
Col2a1P28481 Gm10145-201ENSMUST00000077776 462 ntBASIC4.25□□□□□ -1.73
Col2a1P28481 Gm24147-201ENSMUST00000082763 144 ntBASIC4.25□□□□□ -1.73
Col2a1P28481 Olfr1302-203ENSMUST00000215244 2729 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
Col2a1P28481 Olfr1231-202ENSMUST00000216144 3961 ntAPPRIS P1 TSL 3 BASIC4.25□□□□□ -1.73
Col2a1P28481 Gm43466-201ENSMUST00000197836 5214 ntBASIC4.25□□□□□ -1.73
Col2a1P28481 St8sia4-204ENSMUST00000189556 10027 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Col2a1P28481 Olfr988-202ENSMUST00000111597 1702 ntAPPRIS P1 TSL 3 BASIC4.25□□□□□ -1.73
Col2a1P28481 Gm37064-201ENSMUST00000193851 2231 ntBASIC4.25□□□□□ -1.73
Col2a1P28481 Dst-202ENSMUST00000097786 17212 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
Col2a1P28481 Gm22936-201ENSMUST00000103955 126 ntBASIC4.24□□□□□ -1.73
Col2a1P28481 Gm25272-201ENSMUST00000104293 128 ntBASIC4.24□□□□□ -1.73
Col2a1P28481 Gm24831-201ENSMUST00000116778 126 ntBASIC4.24□□□□□ -1.73
Col2a1P28481 Gm15074-201ENSMUST00000117603 936 ntBASIC4.24□□□□□ -1.73
Col2a1P28481 Gm13607-201ENSMUST00000117875 539 ntBASIC4.24□□□□□ -1.73
Col2a1P28481 Gm16005-201ENSMUST00000120515 269 ntBASIC4.24□□□□□ -1.73
Col2a1P28481 Gm12095-201ENSMUST00000121962 816 ntBASIC4.24□□□□□ -1.73
Col2a1P28481 Gm11349-201ENSMUST00000122209 1116 ntBASIC4.24□□□□□ -1.73
Col2a1P28481 Gm11233-201ENSMUST00000122357 634 ntBASIC4.24□□□□□ -1.73
Col2a1P28481 4930555B12Rik-201ENSMUST00000135444 283 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Col2a1P28481 Crem-222ENSMUST00000144496 978 ntTSL 5 BASIC4.24□□□□□ -1.73
Col2a1P28481 Gm4725-201ENSMUST00000151048 587 ntBASIC4.24□□□□□ -1.73
Col2a1P28481 Crem-231ENSMUST00000152108 654 ntTSL 5 BASIC4.24□□□□□ -1.73
Col2a1P28481 Gm24739-201ENSMUST00000158855 292 ntBASIC4.24□□□□□ -1.73
Col2a1P28481 Gm26141-201ENSMUST00000175299 126 ntBASIC4.24□□□□□ -1.73
Col2a1P28481 Obox4-ps1-201ENSMUST00000184446 700 ntBASIC4.24□□□□□ -1.73
Col2a1P28481 Gm36964-201ENSMUST00000191876 198 ntBASIC4.24□□□□□ -1.73
Col2a1P28481 Gm6680-201ENSMUST00000192789 950 ntBASIC4.24□□□□□ -1.73
Col2a1P28481 Gm17966-201ENSMUST00000193453 594 ntBASIC4.24□□□□□ -1.73
Col2a1P28481 Gm42458-201ENSMUST00000201914 369 ntBASIC4.24□□□□□ -1.73
Col2a1P28481 Gm45006-201ENSMUST00000206078 690 ntBASIC4.24□□□□□ -1.73
Col2a1P28481 Prl4a1-201ENSMUST00000021779 876 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Col2a1P28481 Serpinb3d-201ENSMUST00000023861 1216 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Col2a1P28481 Olfr611-201ENSMUST00000078108 972 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Col2a1P28481 Gm25630-201ENSMUST00000084000 162 ntBASIC4.24□□□□□ -1.73
Col2a1P28481 Olfr661-201ENSMUST00000098168 964 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Col2a1P28481 Vmn1r66-205ENSMUST00000228622 3304 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Col2a1P28481 Zfp62-212ENSMUST00000180016 3964 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Col2a1P28481 Zfp950-204ENSMUST00000143264 4825 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Col2a1P28481 Nlrp2-201ENSMUST00000045022 3404 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Col2a1P28481 Vmn1r34-205ENSMUST00000227332 3075 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Col2a1P28481 Traj17-201ENSMUST00000103724 63 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Col2a1P28481 Gm17106-201ENSMUST00000105610 459 ntTSL 5 BASIC4.24□□□□□ -1.73
Col2a1P28481 Gm12149-201ENSMUST00000117511 654 ntBASIC4.24□□□□□ -1.73
Col2a1P28481 Gemin6-ps-201ENSMUST00000120444 501 ntBASIC4.24□□□□□ -1.73
Col2a1P28481 Gm14383-201ENSMUST00000121637 386 ntBASIC4.24□□□□□ -1.73
Col2a1P28481 Gm16024-201ENSMUST00000128841 171 ntTSL 3 BASIC4.24□□□□□ -1.73
Col2a1P28481 Trim30e-ps1-202ENSMUST00000151294 731 ntBASIC4.24□□□□□ -1.73
Col2a1P28481 Gm24059-201ENSMUST00000157493 312 ntBASIC4.24□□□□□ -1.73
Col2a1P28481 Gm20834-201ENSMUST00000179558 684 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Col2a1P28481 Mir6938-201ENSMUST00000184173 63 ntBASIC4.24□□□□□ -1.73
Col2a1P28481 Gm21139-201ENSMUST00000186594 877 ntBASIC4.24□□□□□ -1.73
Col2a1P28481 Gm37830-201ENSMUST00000195282 837 ntTSL 5 BASIC4.24□□□□□ -1.73
Col2a1P28481 Gm42723-202ENSMUST00000200561 1254 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Col2a1P28481 Gm45420-201ENSMUST00000211243 425 ntBASIC4.24□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 77.2 ms