Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Gm11633-201ENSMUST00000118176 444 ntBASIC3.35□□□□□ -1.87
Sdc1P18828 Gm8145-201ENSMUST00000118220 745 ntBASIC3.35□□□□□ -1.87
Sdc1P18828 Gm11623-201ENSMUST00000120176 1225 ntBASIC3.35□□□□□ -1.87
Sdc1P18828 Gm14591-201ENSMUST00000120407 518 ntBASIC3.35□□□□□ -1.87
Sdc1P18828 Gm8244-201ENSMUST00000121254 264 ntBASIC3.35□□□□□ -1.87
Sdc1P18828 AI847159-204ENSMUST00000148997 753 ntTSL 3 BASIC3.35□□□□□ -1.87
Sdc1P18828 Sox5os5-201ENSMUST00000152192 207 ntTSL 3 BASIC3.35□□□□□ -1.87
Sdc1P18828 Gm17109-201ENSMUST00000163985 358 ntBASIC3.35□□□□□ -1.87
Sdc1P18828 Vmn1r-ps145-201ENSMUST00000175863 424 ntBASIC3.35□□□□□ -1.87
Sdc1P18828 Vmn1r181-201ENSMUST00000181796 1080 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Sdc1P18828 Mir7012-201ENSMUST00000183900 64 ntBASIC3.35□□□□□ -1.87
Sdc1P18828 Mir6973b-201ENSMUST00000184185 80 ntBASIC3.35□□□□□ -1.87
Sdc1P18828 Gm28574-201ENSMUST00000185757 699 ntBASIC3.35□□□□□ -1.87
Sdc1P18828 Gm28781-201ENSMUST00000185760 696 ntBASIC3.35□□□□□ -1.87
Sdc1P18828 Gm28339-201ENSMUST00000185845 696 ntBASIC3.35□□□□□ -1.87
Sdc1P18828 Gm29062-201ENSMUST00000186032 694 ntBASIC3.35□□□□□ -1.87
Sdc1P18828 Gm28943-201ENSMUST00000186187 615 ntBASIC3.35□□□□□ -1.87
Sdc1P18828 Gm29574-201ENSMUST00000186226 696 ntBASIC3.35□□□□□ -1.87
Sdc1P18828 Gm28736-201ENSMUST00000186257 615 ntBASIC3.35□□□□□ -1.87
Sdc1P18828 Gm28828-201ENSMUST00000186601 696 ntBASIC3.35□□□□□ -1.87
Sdc1P18828 Gm28057-201ENSMUST00000186603 615 ntBASIC3.35□□□□□ -1.87
Sdc1P18828 Gm29401-201ENSMUST00000186690 615 ntBASIC3.35□□□□□ -1.87
Sdc1P18828 Gm29178-204ENSMUST00000186784 615 ntBASIC3.35□□□□□ -1.87
Sdc1P18828 Gm28589-201ENSMUST00000186991 615 ntBASIC3.35□□□□□ -1.87
Sdc1P18828 Gm28255-201ENSMUST00000187101 694 ntBASIC3.35□□□□□ -1.87
Sdc1P18828 Gm28936-201ENSMUST00000187153 615 ntBASIC3.35□□□□□ -1.87
Sdc1P18828 Gm29307-201ENSMUST00000187367 696 ntBASIC3.35□□□□□ -1.87
Sdc1P18828 Gm29121-201ENSMUST00000187611 615 ntBASIC3.35□□□□□ -1.87
Sdc1P18828 Gm28243-201ENSMUST00000187801 615 ntBASIC3.35□□□□□ -1.87
Sdc1P18828 1700104B16Rik-202ENSMUST00000187948 722 ntTSL 2 BASIC3.35□□□□□ -1.87
Sdc1P18828 Gm28397-201ENSMUST00000187970 699 ntBASIC3.35□□□□□ -1.87
Sdc1P18828 Gm28844-202ENSMUST00000187977 615 ntBASIC3.35□□□□□ -1.87
Sdc1P18828 Gm28896-201ENSMUST00000188609 696 ntBASIC3.35□□□□□ -1.87
Sdc1P18828 Gm29545-201ENSMUST00000188878 694 ntBASIC3.35□□□□□ -1.87
Sdc1P18828 Gm29196-201ENSMUST00000189239 618 ntBASIC3.35□□□□□ -1.87
Sdc1P18828 Gm29058-201ENSMUST00000189510 615 ntBASIC3.35□□□□□ -1.87
Sdc1P18828 Gm29339-201ENSMUST00000189613 696 ntBASIC3.35□□□□□ -1.87
Sdc1P18828 Gm29624-201ENSMUST00000190018 615 ntBASIC3.35□□□□□ -1.87
Sdc1P18828 Gm28780-201ENSMUST00000190223 615 ntBASIC3.35□□□□□ -1.87
Sdc1P18828 Gm28159-201ENSMUST00000190296 696 ntBASIC3.35□□□□□ -1.87
Sdc1P18828 Gm29366-201ENSMUST00000190481 699 ntBASIC3.35□□□□□ -1.87
Sdc1P18828 Gm28990-207ENSMUST00000191219 615 ntBASIC3.35□□□□□ -1.87
Sdc1P18828 Gm29407-201ENSMUST00000191468 696 ntBASIC3.35□□□□□ -1.87
Sdc1P18828 Gm36468-201ENSMUST00000192119 615 ntBASIC3.35□□□□□ -1.87
Sdc1P18828 Gm37433-201ENSMUST00000192695 678 ntBASIC3.35□□□□□ -1.87
Sdc1P18828 Gm31572-201ENSMUST00000193341 615 ntBASIC3.35□□□□□ -1.87
Sdc1P18828 Gm13266-203ENSMUST00000193364 421 ntTSL 3 BASIC3.35□□□□□ -1.87
Sdc1P18828 Gm30175-201ENSMUST00000194173 615 ntBASIC3.35□□□□□ -1.87
Sdc1P18828 Gm37441-201ENSMUST00000194430 678 ntBASIC3.35□□□□□ -1.87
Sdc1P18828 Gm38107-201ENSMUST00000194873 696 ntBASIC3.35□□□□□ -1.87
Sdc1P18828 Serpinb10-203ENSMUST00000194951 1194 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Sdc1P18828 Gm30858-201ENSMUST00000195516 615 ntBASIC3.35□□□□□ -1.87
Sdc1P18828 Gm43350-201ENSMUST00000196382 711 ntBASIC3.35□□□□□ -1.87
Sdc1P18828 n-TSaga9-201ENSMUST00000197675 107 ntBASIC3.35□□□□□ -1.87
Sdc1P18828 Gm42438-201ENSMUST00000197832 974 ntBASIC3.35□□□□□ -1.87
Sdc1P18828 4930425K10Rik-201ENSMUST00000201190 745 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Sdc1P18828 Gm38832-201ENSMUST00000205674 400 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Sdc1P18828 Gm45007-201ENSMUST00000206237 366 ntBASIC3.35□□□□□ -1.87
Sdc1P18828 Gm44946-201ENSMUST00000208425 572 ntBASIC3.35□□□□□ -1.87
Sdc1P18828 Gm9375-201ENSMUST00000208899 903 ntBASIC3.35□□□□□ -1.87
Sdc1P18828 Olfr337-ps1-202ENSMUST00000213375 526 ntBASIC3.35□□□□□ -1.87
Sdc1P18828 CAAA01216754.6-201ENSMUST00000217183 398 ntTSL 5 BASIC3.35□□□□□ -1.87
Sdc1P18828 AC131677.1-201ENSMUST00000218721 535 ntBASIC3.35□□□□□ -1.87
Sdc1P18828 AC133498.1-203ENSMUST00000221213 668 ntTSL 3 BASIC3.35□□□□□ -1.87
Sdc1P18828 Gm46401-201ENSMUST00000221291 1089 ntTSL 5 BASIC3.35□□□□□ -1.87
Sdc1P18828 Gm19195-201ENSMUST00000222018 511 ntBASIC3.35□□□□□ -1.87
Sdc1P18828 CT025525.4-201ENSMUST00000227728 277 ntBASIC3.35□□□□□ -1.87
Sdc1P18828 Prl8a1-201ENSMUST00000006664 864 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Sdc1P18828 Olfr767-201ENSMUST00000082131 1086 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Sdc1P18828 Gm23846-201ENSMUST00000083835 107 ntBASIC3.35□□□□□ -1.87
Sdc1P18828 Ceacam11-201ENSMUST00000094799 1054 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Sdc1P18828 4932431L22Rik-201ENSMUST00000193456 3140 ntBASIC3.35□□□□□ -1.87
Sdc1P18828 Gm15261-201ENSMUST00000136779 2763 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Sdc1P18828 Cntn6-202ENSMUST00000161070 3515 ntTSL 5 BASIC3.35□□□□□ -1.87
Sdc1P18828 Ccdc144b-201ENSMUST00000166644 1685 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Sdc1P18828 Olfr836-202ENSMUST00000212730 5045 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
Sdc1P18828 AC154323.3-201ENSMUST00000226927 1660 ntBASIC3.35□□□□□ -1.87
Sdc1P18828 Fam111a-204ENSMUST00000151307 3687 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
Sdc1P18828 Gm37011-201ENSMUST00000195543 2935 ntBASIC3.35□□□□□ -1.87
Sdc1P18828 3110062G12Rik-201ENSMUST00000192113 1419 ntBASIC3.35□□□□□ -1.87
Sdc1P18828 Olfr1270-206ENSMUST00000217139 4803 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Sdc1P18828 Gm13974-201ENSMUST00000144368 1454 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Sdc1P18828 Olfr1465-202ENSMUST00000207340 1561 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
Sdc1P18828 AC155830.1-201ENSMUST00000220050 3836 ntBASIC3.34□□□□□ -1.87
Sdc1P18828 Olfr665-202ENSMUST00000215761 2522 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
Sdc1P18828 Olfr418-202ENSMUST00000213420 4388 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
Sdc1P18828 Olfr361-203ENSMUST00000216663 2617 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
Sdc1P18828 Olfr714-203ENSMUST00000214429 4324 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
Sdc1P18828 Gm22019-201ENSMUST00000104359 96 ntBASIC3.34□□□□□ -1.87
Sdc1P18828 Gm11146-201ENSMUST00000114231 96 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
Sdc1P18828 Gm13733-201ENSMUST00000117290 535 ntBASIC3.34□□□□□ -1.87
Sdc1P18828 Gm14388-201ENSMUST00000118119 477 ntBASIC3.34□□□□□ -1.87
Sdc1P18828 Gm11909-201ENSMUST00000121424 759 ntBASIC3.34□□□□□ -1.87
Sdc1P18828 Gm13419-201ENSMUST00000121711 271 ntBASIC3.34□□□□□ -1.87
Sdc1P18828 Gm13209-201ENSMUST00000138492 494 ntTSL 5 BASIC3.34□□□□□ -1.87
Sdc1P18828 Gm14505-201ENSMUST00000145383 831 ntTSL 3 BASIC3.34□□□□□ -1.87
Sdc1P18828 Gm23591-201ENSMUST00000157663 286 ntBASIC3.34□□□□□ -1.87
Sdc1P18828 Gm24734-201ENSMUST00000158860 262 ntBASIC3.34□□□□□ -1.87
Sdc1P18828 Fcf1-202ENSMUST00000171040 731 ntTSL 3 BASIC3.34□□□□□ -1.87
Sdc1P18828 Vmn2r-ps122-201ENSMUST00000176687 906 ntBASIC3.34□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 81.9 ms