Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Vmn1r82-202ENSMUST00000191002 918 ntBASIC3.55□□□□□ -1.84
Cdx1P18111 Snhg1-205ENSMUST00000205825 495 ntTSL 3 BASIC3.55□□□□□ -1.84
Cdx1P18111 2210406H18Rik-201ENSMUST00000207806 1108 ntBASIC3.55□□□□□ -1.84
Cdx1P18111 Olfr1498-ps1-201ENSMUST00000208721 991 ntBASIC3.55□□□□□ -1.84
Cdx1P18111 Gm44869-201ENSMUST00000208836 357 ntBASIC3.55□□□□□ -1.84
Cdx1P18111 Olfr580-ps1-201ENSMUST00000210528 943 ntBASIC3.55□□□□□ -1.84
Cdx1P18111 AC161269.1-201ENSMUST00000228426 318 ntBASIC3.55□□□□□ -1.84
Cdx1P18111 U90926-201ENSMUST00000031356 520 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
Cdx1P18111 Olfr202-201ENSMUST00000049859 924 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
Cdx1P18111 Mup21-201ENSMUST00000077719 677 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
Cdx1P18111 Olfr1450-201ENSMUST00000082006 978 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
Cdx1P18111 Fam24a-201ENSMUST00000084505 371 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
Cdx1P18111 Olfr1436-201ENSMUST00000087812 948 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
Cdx1P18111 Olfr985-202ENSMUST00000214981 1879 ntAPPRIS P1 TSL 3 BASIC3.55□□□□□ -1.84
Cdx1P18111 Gm42909-201ENSMUST00000196982 3619 ntBASIC3.55□□□□□ -1.84
Cdx1P18111 Gm4788-202ENSMUST00000111986 2935 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
Cdx1P18111 AC126033.1-201ENSMUST00000227628 6773 ntBASIC3.55□□□□□ -1.84
Cdx1P18111 Senp8-201ENSMUST00000051039 3682 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
Cdx1P18111 Vmn2r59-201ENSMUST00000168489 2598 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Cdx1P18111 Gm3089-201ENSMUST00000200804 1395 ntBASIC3.54□□□□□ -1.84
Cdx1P18111 Gm3302-201ENSMUST00000201462 1395 ntBASIC3.54□□□□□ -1.84
Cdx1P18111 Gm12586-201ENSMUST00000117328 1316 ntBASIC3.54□□□□□ -1.84
Cdx1P18111 Gm16246-201ENSMUST00000145464 1346 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
Cdx1P18111 AC163296.2-201ENSMUST00000220177 1315 ntBASIC3.54□□□□□ -1.84
Cdx1P18111 Nap1l1-202ENSMUST00000171797 3926 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
Cdx1P18111 Nap1l1-204ENSMUST00000218828 3934 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
Cdx1P18111 Gm43844-201ENSMUST00000202926 5605 ntBASIC3.54□□□□□ -1.84
Cdx1P18111 Tcrg-C1-201ENSMUST00000103558 924 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
Cdx1P18111 Gm14995-201ENSMUST00000117135 391 ntBASIC3.54□□□□□ -1.84
Cdx1P18111 Gm12285-201ENSMUST00000117347 233 ntBASIC3.54□□□□□ -1.84
Cdx1P18111 Gm5392-201ENSMUST00000122189 789 ntBASIC3.54□□□□□ -1.84
Cdx1P18111 4931428L18Rik-202ENSMUST00000135245 889 ntAPPRIS P5 TSL 1 (best) BASIC3.54□□□□□ -1.84
Cdx1P18111 Gm16259-201ENSMUST00000145241 553 ntBASIC3.54□□□□□ -1.84
Cdx1P18111 Gm23046-201ENSMUST00000158369 284 ntBASIC3.54□□□□□ -1.84
Cdx1P18111 Prol1-201ENSMUST00000170832 1163 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
Cdx1P18111 Prl8a6-201ENSMUST00000018392 900 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
Cdx1P18111 Sprr2g-202ENSMUST00000189634 651 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
Cdx1P18111 Gm21735-201ENSMUST00000190360 696 ntBASIC3.54□□□□□ -1.84
Cdx1P18111 Gm9989-202ENSMUST00000193125 258 ntTSL 3 BASIC3.54□□□□□ -1.84
Cdx1P18111 Gm10292-202ENSMUST00000193165 585 ntBASIC3.54□□□□□ -1.84
Cdx1P18111 Gm33973-201ENSMUST00000195148 534 ntBASIC3.54□□□□□ -1.84
Cdx1P18111 Gm30043-201ENSMUST00000196689 733 ntTSL 2 BASIC3.54□□□□□ -1.84
Cdx1P18111 Gm6051-201ENSMUST00000201529 352 ntBASIC3.54□□□□□ -1.84
Cdx1P18111 Gm8774-201ENSMUST00000203621 692 ntBASIC3.54□□□□□ -1.84
Cdx1P18111 Gm44402-201ENSMUST00000203677 238 ntBASIC3.54□□□□□ -1.84
Cdx1P18111 Gm44543-201ENSMUST00000209136 396 ntBASIC3.54□□□□□ -1.84
Cdx1P18111 Gm20039-201ENSMUST00000210329 394 ntBASIC3.54□□□□□ -1.84
Cdx1P18111 Olfr854-202ENSMUST00000212872 939 ntAPPRIS ALT2 BASIC3.54□□□□□ -1.84
Cdx1P18111 Gm18442-201ENSMUST00000220925 639 ntBASIC3.54□□□□□ -1.84
Cdx1P18111 Sprr2g-201ENSMUST00000056590 650 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Cdx1P18111 Vmn1r226-201ENSMUST00000061756 897 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
Cdx1P18111 Gm22304-201ENSMUST00000082688 129 ntBASIC3.54□□□□□ -1.84
Cdx1P18111 Mir26a-1-201ENSMUST00000083579 90 ntBASIC3.54□□□□□ -1.84
Cdx1P18111 Wfdc17-201ENSMUST00000092836 533 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
Cdx1P18111 1700057G04Rik-201ENSMUST00000098477 1052 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
Cdx1P18111 Olfr1056-201ENSMUST00000099893 1079 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
Cdx1P18111 Olfr1286-202ENSMUST00000184954 3398 ntAPPRIS P1 TSL 3 BASIC3.54□□□□□ -1.84
Cdx1P18111 Gm35835-202ENSMUST00000216984 3350 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
Cdx1P18111 Gm3683-201ENSMUST00000175701 2513 ntBASIC3.54□□□□□ -1.84
Cdx1P18111 A230081H15Rik-201ENSMUST00000218326 2929 ntBASIC3.54□□□□□ -1.84
Cdx1P18111 Vmn1r46-204ENSMUST00000228231 13338 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
Cdx1P18111 Gm2042-207ENSMUST00000181326 2440 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
Cdx1P18111 Vmn1r169-203ENSMUST00000227547 2322 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
Cdx1P18111 CAAA01194877.1-201ENSMUST00000213137 4233 ntBASIC3.54□□□□□ -1.84
Cdx1P18111 Pih1h3b-201ENSMUST00000044806 1509 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
Cdx1P18111 Vmn1r66-204ENSMUST00000228086 3013 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
Cdx1P18111 Sult1b1-201ENSMUST00000031199 2604 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
Cdx1P18111 Xiap-202ENSMUST00000055483 6374 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
Cdx1P18111 Csmd3-201ENSMUST00000100670 13022 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Cdx1P18111 B230334C09Rik-201ENSMUST00000200255 8927 ntBASIC3.54□□□□□ -1.84
Cdx1P18111 AC131068.3-201ENSMUST00000228438 1456 ntBASIC3.54□□□□□ -1.84
Cdx1P18111 Slc9c1-201ENSMUST00000159945 3836 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
Cdx1P18111 Cdh7-209ENSMUST00000172005 3353 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
Cdx1P18111 Rbm41-203ENSMUST00000113007 3691 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
Cdx1P18111 Hbp1-206ENSMUST00000176103 1319 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
Cdx1P18111 Gm45792-201ENSMUST00000207795 4268 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
Cdx1P18111 Olfr1477-201ENSMUST00000214274 3913 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
Cdx1P18111 Olfr1205-202ENSMUST00000215929 6149 ntAPPRIS P1 TSL 3 BASIC3.53□□□□□ -1.84
Cdx1P18111 Traj50-201ENSMUST00000103693 63 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
Cdx1P18111 Gm24096-201ENSMUST00000103905 110 ntBASIC3.53□□□□□ -1.84
Cdx1P18111 S100a5-202ENSMUST00000107329 431 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
Cdx1P18111 Gm11262-201ENSMUST00000119326 833 ntBASIC3.53□□□□□ -1.84
Cdx1P18111 Gm4852-201ENSMUST00000121202 729 ntBASIC3.53□□□□□ -1.84
Cdx1P18111 Gm15367-201ENSMUST00000122398 1016 ntBASIC3.53□□□□□ -1.84
Cdx1P18111 Gm22343-201ENSMUST00000122648 286 ntBASIC3.53□□□□□ -1.84
Cdx1P18111 Gm3160-201ENSMUST00000128343 607 ntBASIC3.53□□□□□ -1.84
Cdx1P18111 Gm16373-201ENSMUST00000129517 303 ntBASIC3.53□□□□□ -1.84
Cdx1P18111 Gm16571-201ENSMUST00000159112 291 ntBASIC3.53□□□□□ -1.84
Cdx1P18111 Gm17109-201ENSMUST00000163985 358 ntBASIC3.53□□□□□ -1.84
Cdx1P18111 Mir3104-201ENSMUST00000174911 63 ntBASIC3.53□□□□□ -1.84
Cdx1P18111 Gm27016-201ENSMUST00000183294 715 ntTSL 5 BASIC3.53□□□□□ -1.84
Cdx1P18111 Gm27535-201ENSMUST00000183814 157 ntBASIC3.53□□□□□ -1.84
Cdx1P18111 Gm28730-201ENSMUST00000185939 702 ntTSL 5 BASIC3.53□□□□□ -1.84
Cdx1P18111 Hmgn3-205ENSMUST00000187193 855 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
Cdx1P18111 1700010I02Rik-201ENSMUST00000187729 438 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
Cdx1P18111 4930554C24Rik-201ENSMUST00000187735 1084 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
Cdx1P18111 9130024F11Rik-203ENSMUST00000187858 447 ntTSL 2 BASIC3.53□□□□□ -1.84
Cdx1P18111 1700029E06Rik-201ENSMUST00000189036 757 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
Cdx1P18111 Gm38108-201ENSMUST00000193891 399 ntTSL 5 BASIC3.53□□□□□ -1.84
Cdx1P18111 Gm36971-201ENSMUST00000195244 378 ntTSL 5 BASIC3.53□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 60 ms