Protein–RNA interactions for Protein: P11416

Rara, Retinoic acid receptor alpha, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RaraP11416 Gm24477-201ENSMUST00000157438 103 ntBASIC5.99□□□□□ -1.45
RaraP11416 Gm7271-201ENSMUST00000172369 519 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
RaraP11416 Gm20656-201ENSMUST00000176925 518 ntBASIC5.99□□□□□ -1.45
RaraP11416 Gm26554-201ENSMUST00000180801 845 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
RaraP11416 Gm27855-201ENSMUST00000184122 128 ntBASIC5.99□□□□□ -1.45
RaraP11416 Gm27208-201ENSMUST00000184323 604 ntTSL 3 BASIC5.99□□□□□ -1.45
RaraP11416 Gm29229-201ENSMUST00000188874 323 ntBASIC5.99□□□□□ -1.45
RaraP11416 Gm28075-201ENSMUST00000189179 354 ntTSL 3 BASIC5.99□□□□□ -1.45
RaraP11416 Gm37503-201ENSMUST00000192088 319 ntBASIC5.99□□□□□ -1.45
RaraP11416 Ranbp2-ps11-201ENSMUST00000197185 387 ntBASIC5.99□□□□□ -1.45
RaraP11416 1700015C17Rik-201ENSMUST00000197297 239 ntTSL 5 BASIC5.99□□□□□ -1.45
RaraP11416 Gm43717-201ENSMUST00000198684 310 ntBASIC5.99□□□□□ -1.45
RaraP11416 Gm44239-201ENSMUST00000204228 271 ntBASIC5.99□□□□□ -1.45
RaraP11416 AC183268.2-201ENSMUST00000214513 446 ntBASIC5.99□□□□□ -1.45
RaraP11416 AC153977.1-201ENSMUST00000219416 506 ntTSL 5 BASIC5.99□□□□□ -1.45
RaraP11416 AC154592.1-201ENSMUST00000225784 574 ntBASIC5.99□□□□□ -1.45
RaraP11416 Clec2j-201ENSMUST00000032517 515 ntBASIC5.99□□□□□ -1.45
RaraP11416 S100a9-201ENSMUST00000069960 512 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
RaraP11416 Gm24764-201ENSMUST00000083686 199 ntBASIC5.99□□□□□ -1.45
RaraP11416 Gm16261-201ENSMUST00000096813 205 ntBASIC5.99□□□□□ -1.45
RaraP11416 Gm19514-201ENSMUST00000206856 4489 ntBASIC5.99□□□□□ -1.45
RaraP11416 Olfr461-202ENSMUST00000215009 4292 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
RaraP11416 Olfr906-202ENSMUST00000214344 3775 ntAPPRIS P1 TSL 3 BASIC5.99□□□□□ -1.45
RaraP11416 Csde1-214ENSMUST00000199240 3457 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
RaraP11416 Lingo2-203ENSMUST00000108122 3362 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
RaraP11416 Olfr979-202ENSMUST00000215523 3397 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
RaraP11416 Gm43857-201ENSMUST00000200343 3079 ntBASIC5.99□□□□□ -1.45
RaraP11416 Nebl-206ENSMUST00000131957 1709 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
RaraP11416 Gm43386-201ENSMUST00000199654 4001 ntBASIC5.99□□□□□ -1.45
RaraP11416 AC151831.1-201ENSMUST00000227609 4033 ntBASIC5.99□□□□□ -1.45
RaraP11416 Vmn1r71-201ENSMUST00000079113 4996 ntAPPRIS P2 BASIC5.99□□□□□ -1.45
RaraP11416 Gm15101-201ENSMUST00000178818 1502 ntBASIC5.99□□□□□ -1.45
RaraP11416 Far1-202ENSMUST00000067929 4935 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
RaraP11416 Atr-213ENSMUST00000215311 8102 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
RaraP11416 Enpp2-203ENSMUST00000171545 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC5.98□□□□□ -1.45
RaraP11416 Dopey1-201ENSMUST00000034987 8933 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
RaraP11416 Olfr1310-202ENSMUST00000213559 4897 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
RaraP11416 AC117570.1-201ENSMUST00000214015 1886 ntTSL 5 BASIC5.98□□□□□ -1.45
RaraP11416 Gm2016-201ENSMUST00000110147 1766 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
RaraP11416 Dnah6-204ENSMUST00000204053 12435 ntAPPRIS P2 TSL 5 BASIC5.98□□□□□ -1.45
RaraP11416 Gnal-202ENSMUST00000076605 5223 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
RaraP11416 Gm42819-201ENSMUST00000199630 5121 ntBASIC5.98□□□□□ -1.45
RaraP11416 AC131720.1-201ENSMUST00000218629 2132 ntBASIC5.98□□□□□ -1.45
RaraP11416 Olfr1427-202ENSMUST00000215374 3342 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
RaraP11416 Olfr984-204ENSMUST00000217536 5114 ntAPPRIS P1 TSL 3 BASIC5.98□□□□□ -1.45
RaraP11416 Gm13084-201ENSMUST00000075045 1805 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
RaraP11416 Olfr363-ps-201ENSMUST00000119049 254 ntBASIC5.98□□□□□ -1.45
RaraP11416 Gm15331-201ENSMUST00000120225 385 ntBASIC5.98□□□□□ -1.45
RaraP11416 Gm11852-201ENSMUST00000120806 222 ntBASIC5.98□□□□□ -1.45
RaraP11416 Gm26256-201ENSMUST00000122499 186 ntBASIC5.98□□□□□ -1.45
RaraP11416 Gm24383-201ENSMUST00000122691 333 ntBASIC5.98□□□□□ -1.45
RaraP11416 4933416I08Rik-201ENSMUST00000125315 703 ntBASIC5.98□□□□□ -1.45
RaraP11416 Crem-235ENSMUST00000154705 529 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
RaraP11416 Gm25982-201ENSMUST00000157920 101 ntBASIC5.98□□□□□ -1.45
RaraP11416 Gm26211-201ENSMUST00000158578 129 ntBASIC5.98□□□□□ -1.45
RaraP11416 Gm25365-201ENSMUST00000158852 121 ntBASIC5.98□□□□□ -1.45
RaraP11416 Gm18802-201ENSMUST00000186270 888 ntBASIC5.98□□□□□ -1.45
RaraP11416 Gm28061-201ENSMUST00000189085 807 ntBASIC5.98□□□□□ -1.45
RaraP11416 2310020H05Rik-201ENSMUST00000189489 720 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
RaraP11416 Gm43115-201ENSMUST00000196244 160 ntBASIC5.98□□□□□ -1.45
RaraP11416 Gm30043-201ENSMUST00000196689 733 ntTSL 2 BASIC5.98□□□□□ -1.45
RaraP11416 Gm42621-201ENSMUST00000198114 275 ntBASIC5.98□□□□□ -1.45
RaraP11416 Gm6520-201ENSMUST00000200636 410 ntBASIC5.98□□□□□ -1.45
RaraP11416 Rpl7a-ps14-201ENSMUST00000205097 790 ntBASIC5.98□□□□□ -1.45
RaraP11416 Olfr496-ps1-201ENSMUST00000208862 915 ntBASIC5.98□□□□□ -1.45
RaraP11416 AC112956.1-201ENSMUST00000213563 492 ntBASIC5.98□□□□□ -1.45
RaraP11416 2010107E04Rik-201ENSMUST00000021719 366 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
RaraP11416 AC125041.1-201ENSMUST00000218264 876 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
RaraP11416 Vmn2r-ps92-201ENSMUST00000220242 388 ntBASIC5.98□□□□□ -1.45
RaraP11416 Elk3-205ENSMUST00000223340 750 ntTSL 5 BASIC5.98□□□□□ -1.45
RaraP11416 AC159205.4-201ENSMUST00000225964 704 ntBASIC5.98□□□□□ -1.45
RaraP11416 Ryr3-210ENSMUST00000208151 15370 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
RaraP11416 Cyp2c38-201ENSMUST00000035488 2869 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
RaraP11416 Olfr1242-203ENSMUST00000143935 2406 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
RaraP11416 Catsperg1-212ENSMUST00000169143 3670 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
RaraP11416 Gm36229-201ENSMUST00000218737 1855 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
RaraP11416 Ktn1-214ENSMUST00000188553 3918 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
RaraP11416 Vmn1r235-201ENSMUST00000060603 1781 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
RaraP11416 Rbm46os-201ENSMUST00000131274 3261 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
RaraP11416 Pls3-202ENSMUST00000114057 3160 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
RaraP11416 Vmn2r-ps104-201ENSMUST00000099416 1671 ntTSL 5 BASIC5.98□□□□□ -1.45
RaraP11416 Itih4-203ENSMUST00000120269 3531 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
RaraP11416 Ccar1-201ENSMUST00000020268 4352 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
RaraP11416 AC192616.2-201ENSMUST00000221482 3841 ntBASIC5.97□□□□□ -1.45
RaraP11416 Gm26886-204ENSMUST00000181772 2085 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
RaraP11416 Btbd35f14-201ENSMUST00000105117 1701 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
RaraP11416 Dnajc13-203ENSMUST00000186788 6747 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
RaraP11416 Gm35842-201ENSMUST00000207859 4464 ntTSL 5 BASIC5.97□□□□□ -1.45
RaraP11416 9230019H11Rik-201ENSMUST00000095874 2801 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
RaraP11416 Gm20356-201ENSMUST00000193390 2477 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
RaraP11416 Gm42992-201ENSMUST00000197043 6836 ntBASIC5.97□□□□□ -1.45
RaraP11416 Rfx3-202ENSMUST00000165566 9146 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
RaraP11416 Tmem45a-201ENSMUST00000023435 2701 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
RaraP11416 Gm24709-201ENSMUST00000104123 132 ntBASIC5.97□□□□□ -1.45
RaraP11416 Gm22021-201ENSMUST00000104353 107 ntBASIC5.97□□□□□ -1.45
RaraP11416 Gm24886-201ENSMUST00000104384 123 ntBASIC5.97□□□□□ -1.45
RaraP11416 Gm13082-201ENSMUST00000118877 561 ntBASIC5.97□□□□□ -1.45
RaraP11416 Gm13228-201ENSMUST00000118937 634 ntBASIC5.97□□□□□ -1.45
RaraP11416 Gm11829-201ENSMUST00000121003 282 ntBASIC5.97□□□□□ -1.45
RaraP11416 Gm14736-201ENSMUST00000121470 336 ntBASIC5.97□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 89.3 ms