Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Obox4-ps1-201ENSMUST00000184446 700 ntBASIC4.45□□□□□ -1.7
Lire1P11260 2310030A07Rik-201ENSMUST00000186460 610 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Lire1P11260 4930598F16Rik-201ENSMUST00000187352 761 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Lire1P11260 2610044O15Rik8-203ENSMUST00000188757 413 ntTSL 2 BASIC4.45□□□□□ -1.7
Lire1P11260 Gm28997-201ENSMUST00000188759 429 ntBASIC4.45□□□□□ -1.7
Lire1P11260 1700031M16Rik-204ENSMUST00000189724 824 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
Lire1P11260 Gm29524-201ENSMUST00000190819 699 ntBASIC4.45□□□□□ -1.7
Lire1P11260 Gm29011-201ENSMUST00000191059 712 ntBASIC4.45□□□□□ -1.7
Lire1P11260 1700031M16Rik-207ENSMUST00000191513 847 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
Lire1P11260 Gm37209-201ENSMUST00000194109 1276 ntBASIC4.45□□□□□ -1.7
Lire1P11260 Kcnmb2-206ENSMUST00000194796 338 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Lire1P11260 Gm3189-201ENSMUST00000205595 832 ntBASIC4.45□□□□□ -1.7
Lire1P11260 Gm45086-201ENSMUST00000209052 462 ntTSL 5 BASIC4.45□□□□□ -1.7
Lire1P11260 Gm45615-201ENSMUST00000210417 656 ntTSL 3 BASIC4.45□□□□□ -1.7
Lire1P11260 5430402P08Rik-201ENSMUST00000211799 1143 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Lire1P11260 1700054O05Rik-201ENSMUST00000214107 555 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Lire1P11260 RMST_1.1-204ENSMUST00000217871 699 ntTSL 5 BASIC4.45□□□□□ -1.7
Lire1P11260 Gm7822-201ENSMUST00000222433 581 ntBASIC4.45□□□□□ -1.7
Lire1P11260 AC119573.1-201ENSMUST00000227960 757 ntBASIC4.45□□□□□ -1.7
Lire1P11260 Gm23447-201ENSMUST00000082798 163 ntBASIC4.45□□□□□ -1.7
Lire1P11260 Olfr1293-ps-203ENSMUST00000217845 3628 ntAPPRIS P5 TSL 5 BASIC4.45□□□□□ -1.7
Lire1P11260 Gm19744-204ENSMUST00000188936 4533 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Lire1P11260 Rbm44-201ENSMUST00000094698 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Lire1P11260 Olfr1052-202ENSMUST00000215090 1526 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Lire1P11260 Cybb-201ENSMUST00000015484 4752 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Lire1P11260 Spag17-204ENSMUST00000164539 7862 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Lire1P11260 Vmn1r82-201ENSMUST00000072801 4784 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
Lire1P11260 Atp1b4-201ENSMUST00000016471 4201 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Lire1P11260 Ccr1-201ENSMUST00000026911 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Lire1P11260 Gm24125-201ENSMUST00000104105 137 ntBASIC4.44□□□□□ -1.7
Lire1P11260 Gm23608-201ENSMUST00000104545 128 ntBASIC4.44□□□□□ -1.7
Lire1P11260 Olfr595-ps1-201ENSMUST00000118180 954 ntBASIC4.44□□□□□ -1.7
Lire1P11260 Gm16359-201ENSMUST00000124511 289 ntBASIC4.44□□□□□ -1.7
Lire1P11260 Gm12854-201ENSMUST00000128518 297 ntBASIC4.44□□□□□ -1.7
Lire1P11260 Mllt3-207ENSMUST00000148059 422 ntTSL 5 BASIC4.44□□□□□ -1.7
Lire1P11260 4930577H14Rik-201ENSMUST00000151367 790 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Lire1P11260 4930563I02Rik-202ENSMUST00000154835 971 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Lire1P11260 Gm16114-201ENSMUST00000161930 300 ntBASIC4.44□□□□□ -1.7
Lire1P11260 Has2os-203ENSMUST00000165880 638 ntTSL 2 BASIC4.44□□□□□ -1.7
Lire1P11260 Rpl9-ps5-201ENSMUST00000174221 571 ntBASIC4.44□□□□□ -1.7
Lire1P11260 Gm27818-201ENSMUST00000184536 159 ntBASIC4.44□□□□□ -1.7
Lire1P11260 1700022E09Rik-201ENSMUST00000185295 299 ntTSL 5 BASIC4.44□□□□□ -1.7
Lire1P11260 1700060O08Rik-201ENSMUST00000185390 281 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Lire1P11260 Gm29044-202ENSMUST00000188980 300 ntTSL 5 BASIC4.44□□□□□ -1.7
Lire1P11260 Gm2497-201ENSMUST00000189539 601 ntBASIC4.44□□□□□ -1.7
Lire1P11260 Gm4035-202ENSMUST00000190684 526 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Lire1P11260 Rps27-206ENSMUST00000197361 329 ntTSL 3 BASIC4.44□□□□□ -1.7
Lire1P11260 Trav3-2-201ENSMUST00000198999 305 ntBASIC4.44□□□□□ -1.7
Lire1P11260 Gm44032-201ENSMUST00000204841 166 ntBASIC4.44□□□□□ -1.7
Lire1P11260 Gm10988-201ENSMUST00000209150 1088 ntBASIC4.44□□□□□ -1.7
Lire1P11260 Defb11-201ENSMUST00000051965 317 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Lire1P11260 Gm7665-201ENSMUST00000076710 297 ntBASIC4.44□□□□□ -1.7
Lire1P11260 Olfr1450-201ENSMUST00000082006 978 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
Lire1P11260 n-R5s167-201ENSMUST00000083227 121 ntBASIC4.44□□□□□ -1.7
Lire1P11260 Olfr992-201ENSMUST00000099927 930 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
Lire1P11260 AC116557.1-201ENSMUST00000219494 1521 ntBASIC4.44□□□□□ -1.7
Lire1P11260 Olfr91-202ENSMUST00000216376 3832 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Lire1P11260 Vmn2r108-201ENSMUST00000167314 2568 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Lire1P11260 Gm14552-201ENSMUST00000126906 2098 ntTSL 5 BASIC4.44□□□□□ -1.7
Lire1P11260 Amy1-201ENSMUST00000067980 1985 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Lire1P11260 Vmn1r215-202ENSMUST00000228092 2790 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
Lire1P11260 Gm14305-202ENSMUST00000108981 1646 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
Lire1P11260 Fgf7-202ENSMUST00000110442 2287 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Lire1P11260 Gm13310-201ENSMUST00000120962 1381 ntBASIC4.43□□□□□ -1.7
Lire1P11260 Vmn2r-ps5-201ENSMUST00000175971 2730 ntBASIC4.43□□□□□ -1.7
Lire1P11260 Igkv1-133-201ENSMUST00000103304 374 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
Lire1P11260 Gm4596-201ENSMUST00000117197 442 ntBASIC4.43□□□□□ -1.7
Lire1P11260 Tcea1-ps1-201ENSMUST00000117942 904 ntBASIC4.43□□□□□ -1.7
Lire1P11260 Gm16383-201ENSMUST00000118122 232 ntBASIC4.43□□□□□ -1.7
Lire1P11260 Rps15a-ps4-201ENSMUST00000119415 392 ntBASIC4.43□□□□□ -1.7
Lire1P11260 4930597A21Rik-201ENSMUST00000128652 698 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Lire1P11260 Gm15591-201ENSMUST00000138539 627 ntTSL 5 BASIC4.43□□□□□ -1.7
Lire1P11260 Gm24944-201ENSMUST00000158330 128 ntBASIC4.43□□□□□ -1.7
Lire1P11260 Magea9-ps-202ENSMUST00000167328 899 ntBASIC4.43□□□□□ -1.7
Lire1P11260 1700031A10Rik-201ENSMUST00000174380 656 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Lire1P11260 Gm20711-201ENSMUST00000177351 714 ntTSL 3 BASIC4.43□□□□□ -1.7
Lire1P11260 Gm27528-201ENSMUST00000183544 205 ntBASIC4.43□□□□□ -1.7
Lire1P11260 Gm28784-201ENSMUST00000187817 1011 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Lire1P11260 Gm28962-201ENSMUST00000187993 621 ntTSL 5 BASIC4.43□□□□□ -1.7
Lire1P11260 Gm28692-202ENSMUST00000189645 621 ntTSL 5 BASIC4.43□□□□□ -1.7
Lire1P11260 Gm21735-201ENSMUST00000190360 696 ntBASIC4.43□□□□□ -1.7
Lire1P11260 Vmn1r82-202ENSMUST00000191002 918 ntBASIC4.43□□□□□ -1.7
Lire1P11260 Gm37543-201ENSMUST00000192443 1031 ntBASIC4.43□□□□□ -1.7
Lire1P11260 4930540E01Rik-201ENSMUST00000192569 1146 ntBASIC4.43□□□□□ -1.7
Lire1P11260 Gm37670-201ENSMUST00000193622 229 ntBASIC4.43□□□□□ -1.7
Lire1P11260 Gm37290-201ENSMUST00000195775 339 ntBASIC4.43□□□□□ -1.7
Lire1P11260 Gm42454-201ENSMUST00000196805 1181 ntBASIC4.43□□□□□ -1.7
Lire1P11260 Gm45083-201ENSMUST00000205216 712 ntTSL 3 BASIC4.43□□□□□ -1.7
Lire1P11260 Olfr496-ps1-201ENSMUST00000208862 915 ntBASIC4.43□□□□□ -1.7
Lire1P11260 Gm39197-201ENSMUST00000212069 457 ntBASIC4.43□□□□□ -1.7
Lire1P11260 Gm6980-201ENSMUST00000214327 1003 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Lire1P11260 Trdn-202ENSMUST00000217779 1182 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
Lire1P11260 AC153532.3-201ENSMUST00000218660 3848 ntBASIC4.43□□□□□ -1.7
Lire1P11260 AC135377.1-201ENSMUST00000223692 463 ntBASIC4.43□□□□□ -1.7
Lire1P11260 Stfa1-201ENSMUST00000042097 418 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Lire1P11260 Vmn1r26-201ENSMUST00000049694 1020 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
Lire1P11260 Mir325-201ENSMUST00000083491 98 ntBASIC4.43□□□□□ -1.7
Lire1P11260 Olfr203-201ENSMUST00000089305 924 ntBASIC4.43□□□□□ -1.7
Lire1P11260 Olfr1278-201ENSMUST00000090330 942 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
Lire1P11260 CT009510.2-203ENSMUST00000226704 2136 ntBASIC4.43□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 91.7 ms