Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Gm14295-202ENSMUST00000132883 2505 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Col1a1P11087 P2ry10-201ENSMUST00000053375 2888 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Col1a1P11087 Macc1-201ENSMUST00000048880 3818 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Col1a1P11087 Vmn2r104-201ENSMUST00000168050 2583 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Col1a1P11087 Gm15387-201ENSMUST00000120421 648 ntBASIC4.37□□□□□ -1.71
Col1a1P11087 Hmgb1-ps7-201ENSMUST00000173370 648 ntBASIC4.37□□□□□ -1.71
Col1a1P11087 Olfr593-202ENSMUST00000210686 951 ntAPPRIS ALT2 BASIC4.37□□□□□ -1.71
Col1a1P11087 Prl4a1-201ENSMUST00000021779 876 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Col1a1P11087 AC174797.3-202ENSMUST00000224578 587 ntBASIC4.37□□□□□ -1.71
Col1a1P11087 AC133283.1-201ENSMUST00000228443 859 ntBASIC4.37□□□□□ -1.71
Col1a1P11087 Gm24533-201ENSMUST00000083138 196 ntBASIC4.37□□□□□ -1.71
Col1a1P11087 Gm5518-201ENSMUST00000084171 648 ntBASIC4.37□□□□□ -1.71
Col1a1P11087 AC158605.3-201ENSMUST00000218999 2538 ntBASIC4.37□□□□□ -1.71
Col1a1P11087 Gm4064-201ENSMUST00000187482 1561 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Col1a1P11087 Olfr729-202ENSMUST00000213163 4283 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Col1a1P11087 Olfr1115-202ENSMUST00000213513 3604 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Col1a1P11087 Gm14015-201ENSMUST00000130634 3949 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Col1a1P11087 Cbll1-201ENSMUST00000064240 3937 ntAPPRIS ALT1 TSL 5 BASIC4.37□□□□□ -1.71
Col1a1P11087 AC131068.3-201ENSMUST00000228438 1456 ntBASIC4.37□□□□□ -1.71
Col1a1P11087 Gm37862-201ENSMUST00000193079 2533 ntBASIC4.37□□□□□ -1.71
Col1a1P11087 Enam-202ENSMUST00000199104 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
Col1a1P11087 Gm22472-201ENSMUST00000104115 134 ntBASIC4.37□□□□□ -1.71
Col1a1P11087 Gm6274-201ENSMUST00000118173 797 ntBASIC4.37□□□□□ -1.71
Col1a1P11087 Gm12543-201ENSMUST00000120410 543 ntBASIC4.37□□□□□ -1.71
Col1a1P11087 Gm25295-201ENSMUST00000122794 306 ntBASIC4.37□□□□□ -1.71
Col1a1P11087 Gm14435-202ENSMUST00000127687 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
Col1a1P11087 AI662270-201ENSMUST00000142709 304 ntTSL 2 BASIC4.37□□□□□ -1.71
Col1a1P11087 1700054K19Rik-201ENSMUST00000186102 452 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Col1a1P11087 AC160124.1-201ENSMUST00000215539 519 ntTSL 2 BASIC4.37□□□□□ -1.71
Col1a1P11087 AC158392.2-201ENSMUST00000225402 969 ntBASIC4.37□□□□□ -1.71
Col1a1P11087 AV026068-237ENSMUST00000226075 572 ntBASIC4.37□□□□□ -1.71
Col1a1P11087 Gm38374-201ENSMUST00000194417 2033 ntBASIC4.36□□□□□ -1.71
Col1a1P11087 Zfp62-212ENSMUST00000180016 3964 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
Col1a1P11087 Gm38065-201ENSMUST00000193147 3492 ntBASIC4.36□□□□□ -1.71
Col1a1P11087 Gm37792-201ENSMUST00000195761 3413 ntBASIC4.36□□□□□ -1.71
Col1a1P11087 Slfn8-201ENSMUST00000038141 4011 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Col1a1P11087 Gm44800-201ENSMUST00000207510 1855 ntBASIC4.36□□□□□ -1.71
Col1a1P11087 Tfpi-203ENSMUST00000111711 3968 ntTSL 5 BASIC4.36□□□□□ -1.71
Col1a1P11087 AC140397.1-201ENSMUST00000225563 4562 ntBASIC4.36□□□□□ -1.71
Col1a1P11087 Olfr1480-202ENSMUST00000207093 1819 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
Col1a1P11087 Olfr1480-204ENSMUST00000207987 1804 ntTSL 3 BASIC4.36□□□□□ -1.71
Col1a1P11087 Olfr1043-204ENSMUST00000216028 1824 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
Col1a1P11087 AC104897.1-201ENSMUST00000222638 3628 ntBASIC4.36□□□□□ -1.71
Col1a1P11087 Trps1-202ENSMUST00000165201 9859 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
Col1a1P11087 Depdc1a-203ENSMUST00000120272 3323 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
Col1a1P11087 4932438A13Rik-217ENSMUST00000152564 15541 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
Col1a1P11087 Tlr3-205ENSMUST00000209772 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Col1a1P11087 n-R5s31-201ENSMUST00000104162 110 ntBASIC4.36□□□□□ -1.71
Col1a1P11087 Vmn1r-ps126-201ENSMUST00000117681 926 ntBASIC4.36□□□□□ -1.71
Col1a1P11087 Klrd1-203ENSMUST00000119520 919 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
Col1a1P11087 Gm11623-201ENSMUST00000120176 1225 ntBASIC4.36□□□□□ -1.71
Col1a1P11087 Scgb2b22-ps-201ENSMUST00000121947 340 ntBASIC4.36□□□□□ -1.71
Col1a1P11087 Vmn2r-ps67-201ENSMUST00000172624 385 ntBASIC4.36□□□□□ -1.71
Col1a1P11087 Gm22859-201ENSMUST00000174978 122 ntBASIC4.36□□□□□ -1.71
Col1a1P11087 Gm42458-201ENSMUST00000201914 369 ntBASIC4.36□□□□□ -1.71
Col1a1P11087 Gm8774-201ENSMUST00000203621 692 ntBASIC4.36□□□□□ -1.71
Col1a1P11087 Gm44084-201ENSMUST00000203947 409 ntBASIC4.36□□□□□ -1.71
Col1a1P11087 Gm44371-201ENSMUST00000204148 467 ntBASIC4.36□□□□□ -1.71
Col1a1P11087 Gm44808-201ENSMUST00000208887 264 ntTSL 5 BASIC4.36□□□□□ -1.71
Col1a1P11087 Olfr892-ps1-201ENSMUST00000211998 932 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
Col1a1P11087 Gm46138-201ENSMUST00000215294 426 ntBASIC4.36□□□□□ -1.71
Col1a1P11087 Klra6-201ENSMUST00000074056 1116 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Col1a1P11087 Gm10356-201ENSMUST00000097152 1258 ntBASIC4.36□□□□□ -1.71
Col1a1P11087 Olfr677-201ENSMUST00000098161 939 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
Col1a1P11087 Gm13972-201ENSMUST00000153726 3164 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
Col1a1P11087 Mrgprx2-201ENSMUST00000098433 4610 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Col1a1P11087 Themis-202ENSMUST00000060409 2278 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
Col1a1P11087 Zfp788-201ENSMUST00000045720 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
Col1a1P11087 Nfat5-202ENSMUST00000077440 12773 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
Col1a1P11087 Vmn2r-ps40-201ENSMUST00000174438 2558 ntBASIC4.35□□□□□ -1.71
Col1a1P11087 Cfhr1-201ENSMUST00000023965 1793 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Col1a1P11087 Cd53-201ENSMUST00000038845 1742 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Col1a1P11087 AC154634.4-201ENSMUST00000226077 2665 ntBASIC4.35□□□□□ -1.71
Col1a1P11087 Ano5-201ENSMUST00000043944 7785 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
Col1a1P11087 Trav14d-3-dv8-201ENSMUST00000103608 456 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Col1a1P11087 Uqcrh-ps2-201ENSMUST00000121613 269 ntBASIC4.35□□□□□ -1.71
Col1a1P11087 Gm11351-201ENSMUST00000139335 583 ntTSL 2 BASIC4.35□□□□□ -1.71
Col1a1P11087 Trav14n-1-201ENSMUST00000177578 340 ntAPPRIS ALT2 BASIC4.35□□□□□ -1.71
Col1a1P11087 Gm7656-201ENSMUST00000182468 1004 ntBASIC4.35□□□□□ -1.71
Col1a1P11087 Trav14d-1-202ENSMUST00000187138 340 ntAPPRIS ALT2 BASIC4.35□□□□□ -1.71
Col1a1P11087 Gm29554-201ENSMUST00000187922 821 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Col1a1P11087 Gm43308-201ENSMUST00000197236 373 ntBASIC4.35□□□□□ -1.71
Col1a1P11087 Gm45860-201ENSMUST00000212700 334 ntBASIC4.35□□□□□ -1.71
Col1a1P11087 AC152062.1-201ENSMUST00000218129 386 ntBASIC4.35□□□□□ -1.71
Col1a1P11087 Olfr294-201ENSMUST00000078588 1008 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Col1a1P11087 n-R5s182-201ENSMUST00000083889 107 ntBASIC4.35□□□□□ -1.71
Col1a1P11087 Olfr606-201ENSMUST00000098200 960 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Col1a1P11087 Klra2-201ENSMUST00000032306 1799 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
Col1a1P11087 Olfr1323-202ENSMUST00000213463 3717 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Col1a1P11087 Olfr17-202ENSMUST00000210568 3666 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Col1a1P11087 Kcnb2-201ENSMUST00000170146 14845 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Col1a1P11087 Ubtfl1-203ENSMUST00000169398 4430 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Col1a1P11087 Olfr1487-205ENSMUST00000217061 4080 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
Col1a1P11087 Olfr1369-ps1-202ENSMUST00000213326 3707 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
Col1a1P11087 Peli1-202ENSMUST00000101477 3703 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Col1a1P11087 Zfp808-201ENSMUST00000099449 2571 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Col1a1P11087 Ankrd31-201ENSMUST00000207464 5146 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
Col1a1P11087 Gm26140-201ENSMUST00000103807 110 ntBASIC4.34□□□□□ -1.71
Col1a1P11087 Gm23530-201ENSMUST00000104564 137 ntBASIC4.34□□□□□ -1.71
Col1a1P11087 Gm11234-201ENSMUST00000141030 845 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 78.7 ms