Protein–RNA interactions for Protein: P08121

Col3a1, Collagen alpha-1(III) chain, mousemouse

Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1P08121 Gm43617-201ENSMUST00000196418 606 ntTSL 2 BASIC4.8□□□□□ -1.64
Col3a1P08121 AI506816-203ENSMUST00000198461 503 ntTSL 5 BASIC4.8□□□□□ -1.64
Col3a1P08121 Olfr189-ps1-201ENSMUST00000205310 804 ntBASIC4.8□□□□□ -1.64
Col3a1P08121 Gm44748-201ENSMUST00000206040 658 ntTSL 5 BASIC4.8□□□□□ -1.64
Col3a1P08121 Gm44954-201ENSMUST00000208513 227 ntBASIC4.8□□□□□ -1.64
Col3a1P08121 Gm45240-201ENSMUST00000211437 674 ntBASIC4.8□□□□□ -1.64
Col3a1P08121 Olfr931-ps1-201ENSMUST00000214941 549 ntBASIC4.8□□□□□ -1.64
Col3a1P08121 Olfr274-ps1-201ENSMUST00000216601 595 ntBASIC4.8□□□□□ -1.64
Col3a1P08121 Gm7588-201ENSMUST00000216866 571 ntBASIC4.8□□□□□ -1.64
Col3a1P08121 4930543K20Rik-201ENSMUST00000217044 355 ntBASIC4.8□□□□□ -1.64
Col3a1P08121 AC154733.1-201ENSMUST00000221126 679 ntTSL 5 BASIC4.8□□□□□ -1.64
Col3a1P08121 AC133517.1-202ENSMUST00000224409 233 ntBASIC4.8□□□□□ -1.64
Col3a1P08121 AC166095.1-203ENSMUST00000224591 233 ntBASIC4.8□□□□□ -1.64
Col3a1P08121 AC154738.2-201ENSMUST00000227403 1110 ntBASIC4.8□□□□□ -1.64
Col3a1P08121 Olfr804-201ENSMUST00000077312 945 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Col3a1P08121 Stfa2l1-201ENSMUST00000079184 414 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Col3a1P08121 n-R5s182-201ENSMUST00000083889 107 ntBASIC4.8□□□□□ -1.64
Col3a1P08121 2810474O19Rik-208ENSMUST00000189837 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
Col3a1P08121 Vmn2r50-202ENSMUST00000086298 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
Col3a1P08121 Scn9a-206ENSMUST00000164384 7530 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
Col3a1P08121 Ddx3y-201ENSMUST00000091190 4600 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Col3a1P08121 Olfr596-201ENSMUST00000104880 939 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Col3a1P08121 Zfp972-202ENSMUST00000108934 561 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Col3a1P08121 Gm15988-201ENSMUST00000118677 367 ntBASIC4.79□□□□□ -1.64
Col3a1P08121 Rfpl4b-201ENSMUST00000179279 1054 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Col3a1P08121 Gm27189-201ENSMUST00000184119 190 ntBASIC4.79□□□□□ -1.64
Col3a1P08121 Gm38006-201ENSMUST00000192421 697 ntTSL 5 BASIC4.79□□□□□ -1.64
Col3a1P08121 Gm38333-201ENSMUST00000193608 604 ntBASIC4.79□□□□□ -1.64
Col3a1P08121 Gm22897-202ENSMUST00000197782 127 ntBASIC4.79□□□□□ -1.64
Col3a1P08121 Gm43478-201ENSMUST00000200381 292 ntBASIC4.79□□□□□ -1.64
Col3a1P08121 Vmn1r-ps5-201ENSMUST00000202963 931 ntBASIC4.79□□□□□ -1.64
Col3a1P08121 Gm43929-201ENSMUST00000203025 409 ntBASIC4.79□□□□□ -1.64
Col3a1P08121 Gm44128-201ENSMUST00000204909 219 ntBASIC4.79□□□□□ -1.64
Col3a1P08121 4930402F11Rik-201ENSMUST00000207348 1000 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Col3a1P08121 AC153955.1-201ENSMUST00000217458 663 ntTSL 3 BASIC4.79□□□□□ -1.64
Col3a1P08121 4930556N09Rik-202ENSMUST00000219466 1015 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Col3a1P08121 Olfr147-201ENSMUST00000056364 1166 ntAPPRIS P2 TSL 2 BASIC4.79□□□□□ -1.64
Col3a1P08121 Olfr603-201ENSMUST00000071844 939 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Col3a1P08121 Olfr781-201ENSMUST00000075613 936 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Col3a1P08121 Olfr987-201ENSMUST00000099929 1075 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Col3a1P08121 Gm37345-201ENSMUST00000193062 3138 ntBASIC4.79□□□□□ -1.64
Col3a1P08121 Gm44532-201ENSMUST00000207723 2598 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Col3a1P08121 Nlrp2-201ENSMUST00000045022 3404 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Col3a1P08121 Gm26696-201ENSMUST00000181941 2848 ntBASIC4.78□□□□□ -1.64
Col3a1P08121 AC101945.4-201ENSMUST00000228464 1976 ntBASIC4.78□□□□□ -1.64
Col3a1P08121 Gm43588-201ENSMUST00000201862 2298 ntBASIC4.78□□□□□ -1.64
Col3a1P08121 CAAA01194877.1-201ENSMUST00000213137 4233 ntBASIC4.78□□□□□ -1.64
Col3a1P08121 Cnot1-202ENSMUST00000098473 8390 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Col3a1P08121 Gm5248-201ENSMUST00000186108 4046 ntBASIC4.78□□□□□ -1.64
Col3a1P08121 Gm37498-201ENSMUST00000193524 4002 ntBASIC4.78□□□□□ -1.64
Col3a1P08121 Adam34-201ENSMUST00000110411 2584 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Col3a1P08121 Gm24127-201ENSMUST00000104110 130 ntBASIC4.78□□□□□ -1.64
Col3a1P08121 Homer1-208ENSMUST00000109495 813 ntTSL 5 BASIC4.78□□□□□ -1.64
Col3a1P08121 Gm5938-201ENSMUST00000114030 775 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Col3a1P08121 Rps15a-ps8-201ENSMUST00000117914 387 ntBASIC4.78□□□□□ -1.64
Col3a1P08121 Gm12697-201ENSMUST00000118008 667 ntBASIC4.78□□□□□ -1.64
Col3a1P08121 Gm22514-201ENSMUST00000122547 308 ntBASIC4.78□□□□□ -1.64
Col3a1P08121 Gm11534-201ENSMUST00000125956 204 ntTSL 3 BASIC4.78□□□□□ -1.64
Col3a1P08121 Gm6058-201ENSMUST00000154261 399 ntBASIC4.78□□□□□ -1.64
Col3a1P08121 Gm23116-201ENSMUST00000158481 67 ntBASIC4.78□□□□□ -1.64
Col3a1P08121 Gm17103-201ENSMUST00000168897 549 ntTSL 3 BASIC4.78□□□□□ -1.64
Col3a1P08121 Gm28648-201ENSMUST00000190092 343 ntBASIC4.78□□□□□ -1.64
Col3a1P08121 Gm34732-201ENSMUST00000195441 445 ntTSL 3 BASIC4.78□□□□□ -1.64
Col3a1P08121 Gm43489-201ENSMUST00000196810 993 ntBASIC4.78□□□□□ -1.64
Col3a1P08121 Gm44003-201ENSMUST00000203024 490 ntBASIC4.78□□□□□ -1.64
Col3a1P08121 AC161426.1-201ENSMUST00000214137 286 ntBASIC4.78□□□□□ -1.64
Col3a1P08121 Gm6841-201ENSMUST00000220602 598 ntBASIC4.78□□□□□ -1.64
Col3a1P08121 Gstz1-204ENSMUST00000222222 724 ntAPPRIS ALT1 TSL 2 BASIC4.78□□□□□ -1.64
Col3a1P08121 AC167192.4-201ENSMUST00000224087 993 ntBASIC4.78□□□□□ -1.64
Col3a1P08121 Gm26203-201ENSMUST00000082911 114 ntBASIC4.78□□□□□ -1.64
Col3a1P08121 Vmn1r206-202ENSMUST00000227244 3970 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Col3a1P08121 Olfr1058-202ENSMUST00000213998 1710 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Col3a1P08121 Gm43751-201ENSMUST00000200275 3071 ntBASIC4.78□□□□□ -1.64
Col3a1P08121 Sbno1-201ENSMUST00000065263 10071 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Col3a1P08121 AC123705.2-201ENSMUST00000221653 2009 ntBASIC4.77□□□□□ -1.65
Col3a1P08121 Wdr17-206ENSMUST00000144711 4720 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
Col3a1P08121 Vmn1r201-203ENSMUST00000226965 4741 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
Col3a1P08121 Gm14696-201ENSMUST00000144294 3976 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Col3a1P08121 Gm25764-201ENSMUST00000104092 134 ntBASIC4.77□□□□□ -1.65
Col3a1P08121 Gm23175-201ENSMUST00000104371 132 ntBASIC4.77□□□□□ -1.65
Col3a1P08121 Gm24067-201ENSMUST00000104514 85 ntBASIC4.77□□□□□ -1.65
Col3a1P08121 Gm11372-201ENSMUST00000117348 570 ntBASIC4.77□□□□□ -1.65
Col3a1P08121 Gm14906-201ENSMUST00000119265 390 ntBASIC4.77□□□□□ -1.65
Col3a1P08121 Gm11982-201ENSMUST00000121480 314 ntBASIC4.77□□□□□ -1.65
Col3a1P08121 2210414B05Rik-201ENSMUST00000139600 872 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Col3a1P08121 Gm22531-201ENSMUST00000158819 140 ntBASIC4.77□□□□□ -1.65
Col3a1P08121 Gm27025-201ENSMUST00000182392 942 ntBASIC4.77□□□□□ -1.65
Col3a1P08121 Gm27817-201ENSMUST00000184302 233 ntBASIC4.77□□□□□ -1.65
Col3a1P08121 Gm28298-201ENSMUST00000185287 622 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Col3a1P08121 Gm28127-201ENSMUST00000185293 622 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Col3a1P08121 Gm28176-201ENSMUST00000185322 622 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Col3a1P08121 Gm29315-201ENSMUST00000185844 622 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Col3a1P08121 AV026068-203ENSMUST00000185946 668 ntTSL 3 BASIC4.77□□□□□ -1.65
Col3a1P08121 Gm29581-201ENSMUST00000186083 622 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Col3a1P08121 Gm29210-201ENSMUST00000186332 622 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Col3a1P08121 Gm6712-202ENSMUST00000186431 526 ntTSL 5 BASIC4.77□□□□□ -1.65
Col3a1P08121 Gm28761-201ENSMUST00000186540 622 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Col3a1P08121 Gm28170-201ENSMUST00000186892 622 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Col3a1P08121 Gm28073-201ENSMUST00000187174 622 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Col3a1P08121 Gm28725-201ENSMUST00000187372 622 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 63.4 ms