Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 4921539E11Rik-202ENSMUST00000097944 1683 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Hcn1O88704 Mmp16-201ENSMUST00000029881 5011 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
Hcn1O88704 Olfr1026-202ENSMUST00000217615 1538 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.73
Hcn1O88704 0610010F05Rik-202ENSMUST00000093267 3646 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.73
Hcn1O88704 Gm14305-202ENSMUST00000108981 1646 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.73
Hcn1O88704 Neb-202ENSMUST00000036934 22489 ntAPPRIS P2 TSL 5 BASIC4.21□□□□□ -1.74
Hcn1O88704 Olfr575-202ENSMUST00000213477 3512 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Hcn1O88704 Gm43705-201ENSMUST00000195958 3717 ntBASIC4.21□□□□□ -1.74
Hcn1O88704 Igkv12-98-201ENSMUST00000103327 344 ntAPPRIS ALT2 BASIC4.21□□□□□ -1.74
Hcn1O88704 Gm22473-201ENSMUST00000104114 132 ntBASIC4.21□□□□□ -1.74
Hcn1O88704 Gm12571-201ENSMUST00000118132 243 ntBASIC4.21□□□□□ -1.74
Hcn1O88704 Gm12656-201ENSMUST00000118149 577 ntBASIC4.21□□□□□ -1.74
Hcn1O88704 Gm11881-201ENSMUST00000119408 572 ntBASIC4.21□□□□□ -1.74
Hcn1O88704 Gm2030-201ENSMUST00000119590 1129 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Hcn1O88704 Gm5391-201ENSMUST00000121155 613 ntBASIC4.21□□□□□ -1.74
Hcn1O88704 Klra11-ps-201ENSMUST00000122033 810 ntBASIC4.21□□□□□ -1.74
Hcn1O88704 Gm13599-201ENSMUST00000134476 678 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Hcn1O88704 Gm23906-201ENSMUST00000157573 128 ntBASIC4.21□□□□□ -1.74
Hcn1O88704 Gm25557-201ENSMUST00000158084 315 ntBASIC4.21□□□□□ -1.74
Hcn1O88704 Gm17657-201ENSMUST00000168877 510 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Hcn1O88704 Gm21850-201ENSMUST00000179792 359 ntBASIC4.21□□□□□ -1.74
Hcn1O88704 Olr1-204ENSMUST00000183258 468 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
Hcn1O88704 Gm27165-201ENSMUST00000183951 232 ntBASIC4.21□□□□□ -1.74
Hcn1O88704 Khdrbs2-202ENSMUST00000185666 543 ntTSL 2 BASIC4.21□□□□□ -1.74
Hcn1O88704 Gm28688-201ENSMUST00000187301 268 ntBASIC4.21□□□□□ -1.74
Hcn1O88704 Gm18181-201ENSMUST00000190670 736 ntBASIC4.21□□□□□ -1.74
Hcn1O88704 Gm20203-201ENSMUST00000192352 332 ntBASIC4.21□□□□□ -1.74
Hcn1O88704 Gm38080-201ENSMUST00000194035 268 ntBASIC4.21□□□□□ -1.74
Hcn1O88704 Gm37167-201ENSMUST00000194946 396 ntBASIC4.21□□□□□ -1.74
Hcn1O88704 Gm37571-201ENSMUST00000195048 614 ntTSL 3 BASIC4.21□□□□□ -1.74
Hcn1O88704 Gm18100-201ENSMUST00000200897 452 ntBASIC4.21□□□□□ -1.74
Hcn1O88704 Gm43979-201ENSMUST00000203179 475 ntBASIC4.21□□□□□ -1.74
Hcn1O88704 Gm44389-201ENSMUST00000203795 182 ntBASIC4.21□□□□□ -1.74
Hcn1O88704 Gm38832-201ENSMUST00000205674 400 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Hcn1O88704 Olfr1464-ps1-201ENSMUST00000208760 923 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Hcn1O88704 Gm5373-201ENSMUST00000212113 1050 ntBASIC4.21□□□□□ -1.74
Hcn1O88704 Gm34113-201ENSMUST00000213796 388 ntTSL 2 BASIC4.21□□□□□ -1.74
Hcn1O88704 Gm45965-201ENSMUST00000221192 1284 ntBASIC4.21□□□□□ -1.74
Hcn1O88704 AC147639.1-201ENSMUST00000224216 661 ntBASIC4.21□□□□□ -1.74
Hcn1O88704 AC154576.1-201ENSMUST00000225864 563 ntBASIC4.21□□□□□ -1.74
Hcn1O88704 Krtap31-2-201ENSMUST00000058761 935 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Hcn1O88704 Olfr699-201ENSMUST00000065024 951 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Hcn1O88704 Gm25403-201ENSMUST00000082971 143 ntBASIC4.21□□□□□ -1.74
Hcn1O88704 Gm23455-201ENSMUST00000083331 100 ntBASIC4.21□□□□□ -1.74
Hcn1O88704 Mir27a-201ENSMUST00000083510 87 ntBASIC4.21□□□□□ -1.74
Hcn1O88704 Gm9597-202ENSMUST00000227632 1387 ntBASIC4.21□□□□□ -1.74
Hcn1O88704 4930562D21Rik-201ENSMUST00000123894 1750 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Hcn1O88704 Vmn1r167-202ENSMUST00000227713 2677 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Hcn1O88704 Gm281-201ENSMUST00000144914 2952 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Hcn1O88704 Primpol-201ENSMUST00000040468 3772 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Hcn1O88704 Olfr1140-203ENSMUST00000217572 1327 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Hcn1O88704 Gm38152-201ENSMUST00000195389 3566 ntBASIC4.2□□□□□ -1.74
Hcn1O88704 Vmn1r171-208ENSMUST00000227866 2566 ntAPPRIS ALT2 BASIC4.2□□□□□ -1.74
Hcn1O88704 Olfr629-203ENSMUST00000216300 2277 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Hcn1O88704 AC160931.3-201ENSMUST00000222111 2267 ntBASIC4.2□□□□□ -1.74
Hcn1O88704 Btla-201ENSMUST00000063654 3235 ntAPPRIS P4 TSL 1 (best) BASIC4.2□□□□□ -1.74
Hcn1O88704 Gm45235-201ENSMUST00000208016 4465 ntBASIC4.2□□□□□ -1.74
Hcn1O88704 Gm28940-201ENSMUST00000187929 1682 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Hcn1O88704 Ddx60-202ENSMUST00000093485 5989 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
Hcn1O88704 Olfr799-205ENSMUST00000217364 1580 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Hcn1O88704 Olfr709-ps1-202ENSMUST00000215468 5078 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Hcn1O88704 Fbxw23-202ENSMUST00000198480 1388 ntBASIC4.2□□□□□ -1.74
Hcn1O88704 4932429P05Rik-201ENSMUST00000113958 3093 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Hcn1O88704 Olfr819-202ENSMUST00000216322 3930 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
Hcn1O88704 Gm24469-201ENSMUST00000104487 131 ntBASIC4.2□□□□□ -1.74
Hcn1O88704 Gm15603-201ENSMUST00000119252 492 ntBASIC4.2□□□□□ -1.74
Hcn1O88704 Klrd1-203ENSMUST00000119520 919 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
Hcn1O88704 Gm12564-201ENSMUST00000119860 321 ntBASIC4.2□□□□□ -1.74
Hcn1O88704 Gm15267-201ENSMUST00000120888 464 ntBASIC4.2□□□□□ -1.74
Hcn1O88704 Gm13000-201ENSMUST00000120937 496 ntBASIC4.2□□□□□ -1.74
Hcn1O88704 Gm14907-201ENSMUST00000121948 854 ntBASIC4.2□□□□□ -1.74
Hcn1O88704 n-R5s45-201ENSMUST00000122592 110 ntBASIC4.2□□□□□ -1.74
Hcn1O88704 Gm15848-202ENSMUST00000125056 832 ntTSL 3 BASIC4.2□□□□□ -1.74
Hcn1O88704 4933411O13Rik-202ENSMUST00000140815 370 ntTSL 3 BASIC4.2□□□□□ -1.74
Hcn1O88704 Gm15340-201ENSMUST00000144984 704 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Hcn1O88704 1700058P15Rik-201ENSMUST00000159981 413 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Hcn1O88704 Gm16055-201ENSMUST00000161366 626 ntTSL 2 BASIC4.2□□□□□ -1.74
Hcn1O88704 Gm3030-201ENSMUST00000163410 516 ntBASIC4.2□□□□□ -1.74
Hcn1O88704 Gm3339-201ENSMUST00000163462 475 ntBASIC4.2□□□□□ -1.74
Hcn1O88704 Cldn34c1-206ENSMUST00000169445 705 ntAPPRIS P3 TSL 5 BASIC4.2□□□□□ -1.74
Hcn1O88704 Gm8265-201ENSMUST00000170469 475 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Hcn1O88704 Gm18128-201ENSMUST00000172625 511 ntBASIC4.2□□□□□ -1.74
Hcn1O88704 Olfr757-ps1-201ENSMUST00000172798 413 ntBASIC4.2□□□□□ -1.74
Hcn1O88704 Gm24080-201ENSMUST00000175178 232 ntBASIC4.2□□□□□ -1.74
Hcn1O88704 Gm4842-201ENSMUST00000183237 835 ntBASIC4.2□□□□□ -1.74
Hcn1O88704 Gm27564-201ENSMUST00000185196 96 ntBASIC4.2□□□□□ -1.74
Hcn1O88704 Gm29148-201ENSMUST00000188140 336 ntBASIC4.2□□□□□ -1.74
Hcn1O88704 Gm37401-201ENSMUST00000192053 347 ntTSL 5 BASIC4.2□□□□□ -1.74
Hcn1O88704 Ralyl-205ENSMUST00000192209 662 ntTSL 3 BASIC4.2□□□□□ -1.74
Hcn1O88704 Gm37740-202ENSMUST00000194757 621 ntTSL 5 BASIC4.2□□□□□ -1.74
Hcn1O88704 Gm43574-201ENSMUST00000196226 809 ntTSL 3 BASIC4.2□□□□□ -1.74
Hcn1O88704 Gm42999-201ENSMUST00000198049 786 ntBASIC4.2□□□□□ -1.74
Hcn1O88704 Gm44054-201ENSMUST00000203814 372 ntBASIC4.2□□□□□ -1.74
Hcn1O88704 Gm44988-201ENSMUST00000203835 1161 ntBASIC4.2□□□□□ -1.74
Hcn1O88704 Gm44006-201ENSMUST00000204273 396 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Hcn1O88704 AC107808.2-201ENSMUST00000213542 1027 ntTSL 5 BASIC4.2□□□□□ -1.74
Hcn1O88704 Gm46327-201ENSMUST00000218240 365 ntBASIC4.2□□□□□ -1.74
Hcn1O88704 Gm19540-201ENSMUST00000221843 810 ntBASIC4.2□□□□□ -1.74
Hcn1O88704 Gstz1-204ENSMUST00000222222 724 ntAPPRIS ALT1 TSL 2 BASIC4.2□□□□□ -1.74
Hcn1O88704 AC135377.1-201ENSMUST00000223692 463 ntBASIC4.2□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 80.3 ms