Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Gm25731-201ENSMUST00000175167 125 ntBASIC3.11□□□□□ -1.91
Hmgb3O54879 Gm22108-201ENSMUST00000177961 106 ntBASIC3.11□□□□□ -1.91
Hmgb3O54879 Gm8693-201ENSMUST00000178871 921 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Hmgb3O54879 Vmn1r138-201ENSMUST00000179206 921 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Hmgb3O54879 Gm24798-201ENSMUST00000179334 106 ntBASIC3.11□□□□□ -1.91
Hmgb3O54879 Vmn1r131-201ENSMUST00000179390 921 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Hmgb3O54879 Vmn1r111-201ENSMUST00000179511 921 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Hmgb3O54879 Gm4836-201ENSMUST00000179874 907 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
Hmgb3O54879 Gm10096-202ENSMUST00000180207 907 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
Hmgb3O54879 Gm10487-202ENSMUST00000180344 907 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
Hmgb3O54879 Gm5974-201ENSMUST00000181607 986 ntBASIC3.11□□□□□ -1.91
Hmgb3O54879 Mir6391-201ENSMUST00000184391 104 ntBASIC3.11□□□□□ -1.91
Hmgb3O54879 Gm8600-201ENSMUST00000186320 905 ntBASIC3.11□□□□□ -1.91
Hmgb3O54879 Rhoay-ps3-201ENSMUST00000187648 576 ntBASIC3.11□□□□□ -1.91
Hmgb3O54879 Gm18181-201ENSMUST00000190670 736 ntBASIC3.11□□□□□ -1.91
Hmgb3O54879 Olfr416-ps1-201ENSMUST00000192734 804 ntBASIC3.11□□□□□ -1.91
Hmgb3O54879 Ighv1-27-201ENSMUST00000194473 340 ntBASIC3.11□□□□□ -1.91
Hmgb3O54879 Gm43855-201ENSMUST00000197462 507 ntBASIC3.11□□□□□ -1.91
Hmgb3O54879 Csn2-208ENSMUST00000198057 827 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
Hmgb3O54879 Igkv12-66-201ENSMUST00000199305 348 ntBASIC3.11□□□□□ -1.91
Hmgb3O54879 Gm44059-201ENSMUST00000204048 351 ntBASIC3.11□□□□□ -1.91
Hmgb3O54879 Gm45081-201ENSMUST00000206281 572 ntBASIC3.11□□□□□ -1.91
Hmgb3O54879 Gm45839-201ENSMUST00000209884 399 ntTSL 5 BASIC3.11□□□□□ -1.91
Hmgb3O54879 Gm5917-201ENSMUST00000217638 721 ntBASIC3.11□□□□□ -1.91
Hmgb3O54879 E330017A01Rik-201ENSMUST00000053249 1108 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
Hmgb3O54879 Olfr1148-201ENSMUST00000077580 945 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Hmgb3O54879 Gm10058-201ENSMUST00000079797 893 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
Hmgb3O54879 Tas2r110-201ENSMUST00000082014 1002 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Hmgb3O54879 Olfr1105-201ENSMUST00000099868 939 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Hmgb3O54879 Zscan4f-202ENSMUST00000145237 1829 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
Hmgb3O54879 Tfpi-203ENSMUST00000111711 3968 ntTSL 5 BASIC3.11□□□□□ -1.91
Hmgb3O54879 Gm43613-201ENSMUST00000199409 1613 ntBASIC3.11□□□□□ -1.91
Hmgb3O54879 AC154184.1-201ENSMUST00000224375 1620 ntBASIC3.11□□□□□ -1.91
Hmgb3O54879 Gm2093-201ENSMUST00000180518 3526 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
Hmgb3O54879 CT010444.1-201ENSMUST00000219963 3845 ntBASIC3.11□□□□□ -1.91
Hmgb3O54879 Gm44689-201ENSMUST00000208786 1372 ntTSL 5 BASIC3.11□□□□□ -1.91
Hmgb3O54879 Fbxw28-201ENSMUST00000112039 1497 ntAPPRIS P4 TSL 1 (best) BASIC3.1□□□□□ -1.91
Hmgb3O54879 Gm7233-201ENSMUST00000168619 1761 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
Hmgb3O54879 Olfr1274-ps-202ENSMUST00000216111 3395 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
Hmgb3O54879 Gm45033-201ENSMUST00000206710 3167 ntBASIC3.1□□□□□ -1.91
Hmgb3O54879 Tcrg-C2-201ENSMUST00000103561 914 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
Hmgb3O54879 Gm24117-201ENSMUST00000103973 133 ntBASIC3.1□□□□□ -1.91
Hmgb3O54879 n-R5s219-201ENSMUST00000104328 132 ntBASIC3.1□□□□□ -1.91
Hmgb3O54879 Gm22899-201ENSMUST00000104540 131 ntBASIC3.1□□□□□ -1.91
Hmgb3O54879 Gm15076-201ENSMUST00000117076 474 ntBASIC3.1□□□□□ -1.91
Hmgb3O54879 Rps15a-ps7-201ENSMUST00000117430 392 ntBASIC3.1□□□□□ -1.91
Hmgb3O54879 Gm11366-201ENSMUST00000119279 429 ntBASIC3.1□□□□□ -1.91
Hmgb3O54879 Gm14119-201ENSMUST00000119511 235 ntBASIC3.1□□□□□ -1.91
Hmgb3O54879 Olfr1081-ps1-201ENSMUST00000120210 945 ntBASIC3.1□□□□□ -1.91
Hmgb3O54879 Gm11931-201ENSMUST00000121630 447 ntBASIC3.1□□□□□ -1.91
Hmgb3O54879 Olfr1134-202ENSMUST00000135875 1291 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
Hmgb3O54879 Gm3848-202ENSMUST00000151564 301 ntTSL 3 BASIC3.1□□□□□ -1.91
Hmgb3O54879 Gm25342-201ENSMUST00000157459 122 ntBASIC3.1□□□□□ -1.91
Hmgb3O54879 Gm23198-201ENSMUST00000158811 91 ntBASIC3.1□□□□□ -1.91
Hmgb3O54879 Gm5726-201ENSMUST00000173886 924 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
Hmgb3O54879 Gm8677-201ENSMUST00000174637 924 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
Hmgb3O54879 Gm22254-201ENSMUST00000179186 110 ntBASIC3.1□□□□□ -1.91
Hmgb3O54879 Gm27580-201ENSMUST00000183666 149 ntBASIC3.1□□□□□ -1.91
Hmgb3O54879 Mir6537-201ENSMUST00000184150 110 ntBASIC3.1□□□□□ -1.91
Hmgb3O54879 Gm27427-201ENSMUST00000185134 193 ntBASIC3.1□□□□□ -1.91
Hmgb3O54879 Gm42564-201ENSMUST00000196013 582 ntTSL 5 BASIC3.1□□□□□ -1.91
Hmgb3O54879 Gm9245-201ENSMUST00000200528 983 ntBASIC3.1□□□□□ -1.91
Hmgb3O54879 4930598N05Rik-201ENSMUST00000207048 550 ntTSL 5 BASIC3.1□□□□□ -1.91
Hmgb3O54879 Gm35325-201ENSMUST00000208979 771 ntTSL 2 BASIC3.1□□□□□ -1.91
Hmgb3O54879 AC139758.1-201ENSMUST00000226573 930 ntBASIC3.1□□□□□ -1.91
Hmgb3O54879 AC154738.1-201ENSMUST00000227054 368 ntBASIC3.1□□□□□ -1.91
Hmgb3O54879 Scrg1-201ENSMUST00000034023 700 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Hmgb3O54879 Olfr147-201ENSMUST00000056364 1166 ntAPPRIS P2 TSL 2 BASIC3.1□□□□□ -1.91
Hmgb3O54879 Prl7c1-201ENSMUST00000072943 1016 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Hmgb3O54879 Gm24950-201ENSMUST00000082768 191 ntBASIC3.1□□□□□ -1.91
Hmgb3O54879 Gm23971-201ENSMUST00000083317 191 ntBASIC3.1□□□□□ -1.91
Hmgb3O54879 Gm23849-201ENSMUST00000083833 191 ntBASIC3.1□□□□□ -1.91
Hmgb3O54879 Gm26316-201ENSMUST00000083886 191 ntBASIC3.1□□□□□ -1.91
Hmgb3O54879 Gm22350-201ENSMUST00000083924 156 ntBASIC3.1□□□□□ -1.91
Hmgb3O54879 Rnu2-10-201ENSMUST00000084010 191 ntBASIC3.1□□□□□ -1.91
Hmgb3O54879 Olfr1208-201ENSMUST00000099810 1075 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
Hmgb3O54879 Olfr1134-201ENSMUST00000099857 1102 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
Hmgb3O54879 Serpina6-201ENSMUST00000044159 1605 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Hmgb3O54879 Prrg1-210ENSMUST00000177904 3851 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
Hmgb3O54879 Gm37204-201ENSMUST00000192389 3961 ntBASIC3.1□□□□□ -1.91
Hmgb3O54879 Tex47-203ENSMUST00000160634 2881 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
Hmgb3O54879 Ssx9-201ENSMUST00000103001 602 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
Hmgb3O54879 n-R5s82-201ENSMUST00000104213 109 ntBASIC3.09□□□□□ -1.91
Hmgb3O54879 Olfr616-201ENSMUST00000106886 954 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
Hmgb3O54879 Gm14539-201ENSMUST00000117527 174 ntBASIC3.09□□□□□ -1.91
Hmgb3O54879 Gm14905-201ENSMUST00000122351 639 ntBASIC3.09□□□□□ -1.91
Hmgb3O54879 Gm13632-201ENSMUST00000150119 384 ntTSL 5 BASIC3.09□□□□□ -1.91
Hmgb3O54879 Gm16589-201ENSMUST00000159522 918 ntBASIC3.09□□□□□ -1.91
Hmgb3O54879 Vmn1r-ps143-201ENSMUST00000176730 604 ntBASIC3.09□□□□□ -1.91
Hmgb3O54879 Gm27805-201ENSMUST00000184513 79 ntBASIC3.09□□□□□ -1.91
Hmgb3O54879 2900002M20Rik-201ENSMUST00000195754 330 ntBASIC3.09□□□□□ -1.91
Hmgb3O54879 4930587E11Rik-202ENSMUST00000204857 807 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
Hmgb3O54879 Olfr1486-ps1-201ENSMUST00000208835 220 ntBASIC3.09□□□□□ -1.91
Hmgb3O54879 Gm45593-201ENSMUST00000211415 752 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
Hmgb3O54879 Gm18850-201ENSMUST00000211578 388 ntBASIC3.09□□□□□ -1.91
Hmgb3O54879 Gm4052-201ENSMUST00000220890 451 ntBASIC3.09□□□□□ -1.91
Hmgb3O54879 AC173345.3-201ENSMUST00000221245 1093 ntBASIC3.09□□□□□ -1.91
Hmgb3O54879 Gm40394-201ENSMUST00000221321 633 ntTSL 5 BASIC3.09□□□□□ -1.91
Hmgb3O54879 AC211878.2-201ENSMUST00000222486 488 ntBASIC3.09□□□□□ -1.91
Hmgb3O54879 AL645546.1-201ENSMUST00000225001 189 ntBASIC3.09□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 93.9 ms