Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Olfr1328-202ENSMUST00000215312 5038 ntAPPRIS ALT1 TSL 5 BASIC4.93□□□□□ -1.62
Pcdh1F7BJK1 E330016L19Rik-201ENSMUST00000140614 1959 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Pcdh1F7BJK1 Olfr1443-201ENSMUST00000049724 4343 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Pcdh1F7BJK1 Vmn2r124-201ENSMUST00000176802 2568 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
Pcdh1F7BJK1 Zfp101-201ENSMUST00000167107 2735 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Pcdh1F7BJK1 Trav8n-2-201ENSMUST00000103632 408 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
Pcdh1F7BJK1 Trhr-202ENSMUST00000110289 1745 ntAPPRIS P1 TSL 2 BASIC4.93□□□□□ -1.62
Pcdh1F7BJK1 Cav1-203ENSMUST00000115454 613 ntTSL 2 BASIC4.93□□□□□ -1.62
Pcdh1F7BJK1 Gm14772-201ENSMUST00000116562 514 ntBASIC4.93□□□□□ -1.62
Pcdh1F7BJK1 Gm24275-201ENSMUST00000116780 146 ntBASIC4.93□□□□□ -1.62
Pcdh1F7BJK1 Gm13331-201ENSMUST00000117500 448 ntBASIC4.93□□□□□ -1.62
Pcdh1F7BJK1 Gm12683-201ENSMUST00000117528 415 ntBASIC4.93□□□□□ -1.62
Pcdh1F7BJK1 Olfr407-ps1-201ENSMUST00000117794 866 ntBASIC4.93□□□□□ -1.62
Pcdh1F7BJK1 Gm13755-201ENSMUST00000118509 305 ntBASIC4.93□□□□□ -1.62
Pcdh1F7BJK1 4933416I08Rik-201ENSMUST00000125315 703 ntBASIC4.93□□□□□ -1.62
Pcdh1F7BJK1 Gm22765-201ENSMUST00000158371 128 ntBASIC4.93□□□□□ -1.62
Pcdh1F7BJK1 Gm16290-201ENSMUST00000161175 474 ntBASIC4.93□□□□□ -1.62
Pcdh1F7BJK1 Lgals1-ps1-201ENSMUST00000173500 368 ntBASIC4.93□□□□□ -1.62
Pcdh1F7BJK1 Olfr753-ps1-202ENSMUST00000174673 919 ntBASIC4.93□□□□□ -1.62
Pcdh1F7BJK1 Obox4-ps34-201ENSMUST00000175879 520 ntBASIC4.93□□□□□ -1.62
Pcdh1F7BJK1 Clec5a-204ENSMUST00000177178 665 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
Pcdh1F7BJK1 Gm21070-201ENSMUST00000182425 985 ntBASIC4.93□□□□□ -1.62
Pcdh1F7BJK1 1810053B23Rik-201ENSMUST00000185242 634 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Pcdh1F7BJK1 1700108J01Rik-201ENSMUST00000187423 484 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Pcdh1F7BJK1 Gm29591-201ENSMUST00000188215 357 ntTSL 5 BASIC4.93□□□□□ -1.62
Pcdh1F7BJK1 1700027A15Rik-202ENSMUST00000188349 617 ntTSL 3 BASIC4.93□□□□□ -1.62
Pcdh1F7BJK1 Gm42428-201ENSMUST00000198677 302 ntBASIC4.93□□□□□ -1.62
Pcdh1F7BJK1 Gm44894-201ENSMUST00000205280 2174 ntBASIC4.93□□□□□ -1.62
Pcdh1F7BJK1 Gm36864-201ENSMUST00000205530 684 ntAPPRIS ALT2 TSL 3 BASIC4.93□□□□□ -1.62
Pcdh1F7BJK1 Gm29754-201ENSMUST00000206269 358 ntBASIC4.93□□□□□ -1.62
Pcdh1F7BJK1 Gm44580-201ENSMUST00000206333 877 ntBASIC4.93□□□□□ -1.62
Pcdh1F7BJK1 Olfr200-ps1-201ENSMUST00000207964 874 ntBASIC4.93□□□□□ -1.62
Pcdh1F7BJK1 Gm17737-201ENSMUST00000210183 1147 ntBASIC4.93□□□□□ -1.62
Pcdh1F7BJK1 Olfr546-ps1-201ENSMUST00000210328 326 ntBASIC4.93□□□□□ -1.62
Pcdh1F7BJK1 Gm44992-214ENSMUST00000210787 1079 ntTSL 5 BASIC4.93□□□□□ -1.62
Pcdh1F7BJK1 Gm6929-201ENSMUST00000210930 468 ntBASIC4.93□□□□□ -1.62
Pcdh1F7BJK1 AC137127.3-201ENSMUST00000213340 349 ntBASIC4.93□□□□□ -1.62
Pcdh1F7BJK1 AC153954.2-201ENSMUST00000213811 287 ntBASIC4.93□□□□□ -1.62
Pcdh1F7BJK1 Gm5023-201ENSMUST00000217442 587 ntBASIC4.93□□□□□ -1.62
Pcdh1F7BJK1 AC159244.1-201ENSMUST00000220964 594 ntBASIC4.93□□□□□ -1.62
Pcdh1F7BJK1 AC164426.1-201ENSMUST00000225745 929 ntBASIC4.93□□□□□ -1.62
Pcdh1F7BJK1 Tbc1d23-201ENSMUST00000023431 3690 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Pcdh1F7BJK1 Vmn1r230-201ENSMUST00000053974 951 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
Pcdh1F7BJK1 Slc22a30-201ENSMUST00000064507 1888 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Pcdh1F7BJK1 Gm26206-201ENSMUST00000082908 110 ntBASIC4.93□□□□□ -1.62
Pcdh1F7BJK1 Rpl31-ps17-201ENSMUST00000097040 378 ntBASIC4.93□□□□□ -1.62
Pcdh1F7BJK1 Zfp62-202ENSMUST00000109197 4029 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Pcdh1F7BJK1 Gm43283-201ENSMUST00000199138 2548 ntBASIC4.93□□□□□ -1.62
Pcdh1F7BJK1 Rgs7-207ENSMUST00000195324 2209 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
Pcdh1F7BJK1 Fbxw16-201ENSMUST00000084984 1497 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Pcdh1F7BJK1 Gm45644-201ENSMUST00000210255 2740 ntBASIC4.93□□□□□ -1.62
Pcdh1F7BJK1 Vmn2r-ps56-201ENSMUST00000174814 2596 ntBASIC4.93□□□□□ -1.62
Pcdh1F7BJK1 Gm45160-201ENSMUST00000207112 3099 ntBASIC4.93□□□□□ -1.62
Pcdh1F7BJK1 1700022I11Rik-201ENSMUST00000030163 3727 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Pcdh1F7BJK1 Tom1l1-204ENSMUST00000107869 1826 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Pcdh1F7BJK1 Gm42702-201ENSMUST00000199515 4217 ntBASIC4.92□□□□□ -1.62
Pcdh1F7BJK1 Zfp78-206ENSMUST00000208390 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
Pcdh1F7BJK1 Dcun1d1-203ENSMUST00000178098 4434 ntTSL 5 BASIC4.92□□□□□ -1.62
Pcdh1F7BJK1 Lpp-203ENSMUST00000115314 14854 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Pcdh1F7BJK1 Kcnu1-201ENSMUST00000098858 3536 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Pcdh1F7BJK1 Gm37456-201ENSMUST00000193176 5837 ntBASIC4.92□□□□□ -1.62
Pcdh1F7BJK1 Klrb1f-201ENSMUST00000032257 1701 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Pcdh1F7BJK1 Gm21704-201ENSMUST00000169382 1573 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
Pcdh1F7BJK1 Rbmy-202ENSMUST00000171534 1573 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Pcdh1F7BJK1 Gm21708-202ENSMUST00000188091 1573 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Pcdh1F7BJK1 Pum2-210ENSMUST00000169089 3295 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
Pcdh1F7BJK1 Ints12-201ENSMUST00000029650 3101 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Pcdh1F7BJK1 Gm23739-201ENSMUST00000102295 108 ntBASIC4.92□□□□□ -1.62
Pcdh1F7BJK1 Igkv8-18-201ENSMUST00000103390 395 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
Pcdh1F7BJK1 Tcrg-V7-201ENSMUST00000103553 368 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
Pcdh1F7BJK1 Gm10972-201ENSMUST00000107276 81 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
Pcdh1F7BJK1 Scgb2b3-201ENSMUST00000108090 339 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Pcdh1F7BJK1 Gm14987-201ENSMUST00000117820 676 ntBASIC4.92□□□□□ -1.62
Pcdh1F7BJK1 Gm9308-201ENSMUST00000119073 448 ntBASIC4.92□□□□□ -1.62
Pcdh1F7BJK1 Gm5942-201ENSMUST00000120046 439 ntBASIC4.92□□□□□ -1.62
Pcdh1F7BJK1 Gm14655-201ENSMUST00000120124 578 ntBASIC4.92□□□□□ -1.62
Pcdh1F7BJK1 Gm12543-201ENSMUST00000120410 543 ntBASIC4.92□□□□□ -1.62
Pcdh1F7BJK1 Gm12413-201ENSMUST00000121508 312 ntBASIC4.92□□□□□ -1.62
Pcdh1F7BJK1 Gm24836-201ENSMUST00000122609 108 ntBASIC4.92□□□□□ -1.62
Pcdh1F7BJK1 Rab7b-203ENSMUST00000129905 476 ntTSL 2 BASIC4.92□□□□□ -1.62
Pcdh1F7BJK1 1600025M17Rik-201ENSMUST00000138262 666 ntTSL 5 BASIC4.92□□□□□ -1.62
Pcdh1F7BJK1 5730412P04Rik-201ENSMUST00000147100 1149 ntTSL 5 BASIC4.92□□□□□ -1.62
Pcdh1F7BJK1 Gm12694-201ENSMUST00000149367 748 ntTSL 3 BASIC4.92□□□□□ -1.62
Pcdh1F7BJK1 Gm22563-201ENSMUST00000157333 269 ntBASIC4.92□□□□□ -1.62
Pcdh1F7BJK1 Gm23332-201ENSMUST00000157424 275 ntBASIC4.92□□□□□ -1.62
Pcdh1F7BJK1 Gm25706-201ENSMUST00000157828 247 ntBASIC4.92□□□□□ -1.62
Pcdh1F7BJK1 Gm23896-201ENSMUST00000158109 130 ntBASIC4.92□□□□□ -1.62
Pcdh1F7BJK1 Gm22261-201ENSMUST00000158691 324 ntBASIC4.92□□□□□ -1.62
Pcdh1F7BJK1 Gm9006-201ENSMUST00000165520 841 ntBASIC4.92□□□□□ -1.62
Pcdh1F7BJK1 Gm17206-201ENSMUST00000168123 577 ntTSL 5 BASIC4.92□□□□□ -1.62
Pcdh1F7BJK1 Gm24303-201ENSMUST00000178237 126 ntBASIC4.92□□□□□ -1.62
Pcdh1F7BJK1 Mir6361-201ENSMUST00000185079 101 ntBASIC4.92□□□□□ -1.62
Pcdh1F7BJK1 1700064J06Rik-201ENSMUST00000187551 386 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Pcdh1F7BJK1 Gm18177-201ENSMUST00000188373 404 ntBASIC4.92□□□□□ -1.62
Pcdh1F7BJK1 Gm33354-201ENSMUST00000195448 906 ntBASIC4.92□□□□□ -1.62
Pcdh1F7BJK1 Gm42484-201ENSMUST00000196075 2104 ntBASIC4.92□□□□□ -1.62
Pcdh1F7BJK1 4930512P04Rik-201ENSMUST00000197000 424 ntBASIC4.92□□□□□ -1.62
Pcdh1F7BJK1 Gm43444-201ENSMUST00000198123 291 ntBASIC4.92□□□□□ -1.62
Pcdh1F7BJK1 Gm8953-201ENSMUST00000198497 904 ntTSL 5 BASIC4.92□□□□□ -1.62
Pcdh1F7BJK1 Gm33758-201ENSMUST00000199230 407 ntTSL 3 BASIC4.92□□□□□ -1.62
Retrieved 100 of 76,532 protein–RNA pairs in 96.8 ms