Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Gm25843-201ENSMUST00000122582 314 ntBASIC3.14□□□□□ -1.91
Col6a4A2AX52 Gm15961-201ENSMUST00000156090 266 ntTSL 3 BASIC3.14□□□□□ -1.91
Col6a4A2AX52 Gm25447-201ENSMUST00000158997 128 ntBASIC3.14□□□□□ -1.91
Col6a4A2AX52 Gm26556-201ENSMUST00000180645 320 ntBASIC3.14□□□□□ -1.91
Col6a4A2AX52 Gm5829-201ENSMUST00000191383 351 ntBASIC3.14□□□□□ -1.91
Col6a4A2AX52 Gm37081-201ENSMUST00000192034 196 ntBASIC3.14□□□□□ -1.91
Col6a4A2AX52 Gm9931-201ENSMUST00000193584 1185 ntBASIC3.14□□□□□ -1.91
Col6a4A2AX52 AC093926.1-201ENSMUST00000213730 243 ntBASIC3.14□□□□□ -1.91
Col6a4A2AX52 AC152062.1-201ENSMUST00000218129 386 ntBASIC3.14□□□□□ -1.91
Col6a4A2AX52 Olfr638-202ENSMUST00000218325 1158 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
Col6a4A2AX52 2310057J18Rik-202ENSMUST00000140558 1445 ntTSL 5 BASIC3.14□□□□□ -1.91
Col6a4A2AX52 Adgrg4-204ENSMUST00000153784 9329 ntAPPRIS P5 TSL 5 BASIC3.13□□□□□ -1.91
Col6a4A2AX52 Olfr615-203ENSMUST00000215673 3469 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Col6a4A2AX52 AC154481.2-201ENSMUST00000222526 3175 ntBASIC3.13□□□□□ -1.91
Col6a4A2AX52 Olfr988-202ENSMUST00000111597 1702 ntAPPRIS P1 TSL 3 BASIC3.13□□□□□ -1.91
Col6a4A2AX52 Gm14806-201ENSMUST00000116606 2110 ntBASIC3.13□□□□□ -1.91
Col6a4A2AX52 Gm42772-201ENSMUST00000199945 3041 ntBASIC3.13□□□□□ -1.91
Col6a4A2AX52 Igkv1-131-201ENSMUST00000103306 362 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
Col6a4A2AX52 Gm11110-201ENSMUST00000112915 1013 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Col6a4A2AX52 Gm12683-201ENSMUST00000117528 415 ntBASIC3.13□□□□□ -1.91
Col6a4A2AX52 Arl6-203ENSMUST00000118438 875 ntTSL 3 BASIC3.13□□□□□ -1.91
Col6a4A2AX52 Gm12543-201ENSMUST00000120410 543 ntBASIC3.13□□□□□ -1.91
Col6a4A2AX52 Gm22383-201ENSMUST00000158188 327 ntBASIC3.13□□□□□ -1.91
Col6a4A2AX52 Gm17210-201ENSMUST00000169975 391 ntTSL 3 BASIC3.13□□□□□ -1.91
Col6a4A2AX52 Gm5551-201ENSMUST00000199720 690 ntBASIC3.13□□□□□ -1.91
Col6a4A2AX52 Olfr673-ps1-201ENSMUST00000210859 411 ntBASIC3.13□□□□□ -1.91
Col6a4A2AX52 Gm18225-201ENSMUST00000216708 742 ntBASIC3.13□□□□□ -1.91
Col6a4A2AX52 Gm7745-202ENSMUST00000222914 567 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
Col6a4A2AX52 AC124746.2-201ENSMUST00000226594 427 ntBASIC3.13□□□□□ -1.91
Col6a4A2AX52 CT025548.1-201ENSMUST00000227459 257 ntBASIC3.13□□□□□ -1.91
Col6a4A2AX52 Olfr988-201ENSMUST00000099928 1076 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
Col6a4A2AX52 Olfr32-205ENSMUST00000215659 2998 ntAPPRIS P1 TSL 3 BASIC3.13□□□□□ -1.91
Col6a4A2AX52 Tmem71-201ENSMUST00000048372 2988 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
Col6a4A2AX52 Cdh7-201ENSMUST00000027542 3390 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
Col6a4A2AX52 Nat1-201ENSMUST00000026677 1347 ntAPPRIS P2 BASIC3.13□□□□□ -1.91
Col6a4A2AX52 Gm43881-201ENSMUST00000203051 2530 ntBASIC3.13□□□□□ -1.91
Col6a4A2AX52 Olfr1130-201ENSMUST00000213103 2643 ntAPPRIS P1 TSL 3 BASIC3.13□□□□□ -1.91
Col6a4A2AX52 Olfr1130-202ENSMUST00000216580 2648 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Col6a4A2AX52 Gm12577-201ENSMUST00000119701 574 ntBASIC3.13□□□□□ -1.91
Col6a4A2AX52 Gm11234-201ENSMUST00000141030 845 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
Col6a4A2AX52 Gm25835-201ENSMUST00000158917 144 ntBASIC3.13□□□□□ -1.91
Col6a4A2AX52 Trbv8-201ENSMUST00000194020 285 ntBASIC3.13□□□□□ -1.91
Col6a4A2AX52 Gm44371-201ENSMUST00000204148 467 ntBASIC3.13□□□□□ -1.91
Col6a4A2AX52 Olfr747-202ENSMUST00000205373 1132 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Col6a4A2AX52 4930567K12Rik-201ENSMUST00000207593 1281 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
Col6a4A2AX52 CT485612.3-201ENSMUST00000222179 408 ntBASIC3.13□□□□□ -1.91
Col6a4A2AX52 AL672194.1-201ENSMUST00000224841 603 ntBASIC3.13□□□□□ -1.91
Col6a4A2AX52 Agtr2-201ENSMUST00000089188 3283 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
Col6a4A2AX52 Olfr912-201ENSMUST00000217160 5726 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
Col6a4A2AX52 Pramel6-202ENSMUST00000111572 1781 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Col6a4A2AX52 Cftr-204ENSMUST00000129452 2835 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
Col6a4A2AX52 Matr3-201ENSMUST00000166793 6262 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Col6a4A2AX52 Vmn1r51-205ENSMUST00000227109 4214 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
Col6a4A2AX52 Vmn2r86-201ENSMUST00000170257 3039 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Col6a4A2AX52 Vmn1r89-204ENSMUST00000227239 1992 ntAPPRIS P2 BASIC3.12□□□□□ -1.91
Col6a4A2AX52 Zfp638-206ENSMUST00000203324 3822 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
Col6a4A2AX52 Olfr898-202ENSMUST00000216304 3979 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
Col6a4A2AX52 Gm25407-201ENSMUST00000104102 134 ntBASIC3.12□□□□□ -1.91
Col6a4A2AX52 Gm5133-201ENSMUST00000118940 1255 ntBASIC3.12□□□□□ -1.91
Col6a4A2AX52 Gm15022-201ENSMUST00000122074 746 ntBASIC3.12□□□□□ -1.91
Col6a4A2AX52 Gm12204-201ENSMUST00000147412 333 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
Col6a4A2AX52 Gm12534-201ENSMUST00000147691 469 ntTSL 3 BASIC3.12□□□□□ -1.91
Col6a4A2AX52 Gm27903-201ENSMUST00000175482 126 ntBASIC3.12□□□□□ -1.91
Col6a4A2AX52 Gm36934-201ENSMUST00000192007 306 ntBASIC3.12□□□□□ -1.91
Col6a4A2AX52 Gm18900-201ENSMUST00000193218 584 ntBASIC3.12□□□□□ -1.91
Col6a4A2AX52 Gm43475-201ENSMUST00000196673 400 ntTSL 2 BASIC3.12□□□□□ -1.91
Col6a4A2AX52 AC107757.3-201ENSMUST00000226312 535 ntBASIC3.12□□□□□ -1.91
Col6a4A2AX52 Lrrc69-201ENSMUST00000023917 1242 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Col6a4A2AX52 Olfr1495-201ENSMUST00000061669 1089 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
Col6a4A2AX52 AC133076.2-201ENSMUST00000227678 3532 ntBASIC3.12□□□□□ -1.91
Col6a4A2AX52 Neb-203ENSMUST00000075301 21456 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
Col6a4A2AX52 AC153964.1-201ENSMUST00000219677 3142 ntBASIC3.12□□□□□ -1.91
Col6a4A2AX52 Zfp266-202ENSMUST00000174462 6283 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Col6a4A2AX52 Calcrl-202ENSMUST00000099944 3973 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Col6a4A2AX52 Abcg3-201ENSMUST00000031239 3035 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Col6a4A2AX52 Olfr963-202ENSMUST00000215649 2203 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Col6a4A2AX52 Gm2004-201ENSMUST00000109049 1749 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Col6a4A2AX52 Gm14419-202ENSMUST00000126358 1749 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Col6a4A2AX52 Dst-211ENSMUST00000183034 23201 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
Col6a4A2AX52 Trav16n-201ENSMUST00000103633 353 ntAPPRIS ALT2 BASIC3.11□□□□□ -1.91
Col6a4A2AX52 Gm13386-201ENSMUST00000117677 124 ntBASIC3.11□□□□□ -1.91
Col6a4A2AX52 Olfr1235-ps1-201ENSMUST00000117898 314 ntBASIC3.11□□□□□ -1.91
Col6a4A2AX52 Psmb7-ps2-201ENSMUST00000118546 820 ntBASIC3.11□□□□□ -1.91
Col6a4A2AX52 Hspe1-ps6-201ENSMUST00000120275 283 ntBASIC3.11□□□□□ -1.91
Col6a4A2AX52 Gm12082-201ENSMUST00000138164 600 ntTSL 3 BASIC3.11□□□□□ -1.91
Col6a4A2AX52 Mir7k-201ENSMUST00000184115 110 ntBASIC3.11□□□□□ -1.91
Col6a4A2AX52 1700024B18Rik-201ENSMUST00000190088 423 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
Col6a4A2AX52 Gm37085-201ENSMUST00000193780 196 ntBASIC3.11□□□□□ -1.91
Col6a4A2AX52 AC142499.1-201ENSMUST00000220036 374 ntBASIC3.11□□□□□ -1.91
Col6a4A2AX52 2410024N13Rik-201ENSMUST00000090704 669 ntBASIC3.11□□□□□ -1.91
Col6a4A2AX52 Olfr895-201ENSMUST00000093864 951 ntBASIC3.11□□□□□ -1.91
Col6a4A2AX52 Gm42949-201ENSMUST00000197054 2202 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
Col6a4A2AX52 Themis-202ENSMUST00000060409 2278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
Col6a4A2AX52 Trim30d-202ENSMUST00000071069 3282 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
Col6a4A2AX52 6720464F23Rik-201ENSMUST00000193946 3496 ntBASIC3.11□□□□□ -1.91
Col6a4A2AX52 Gm16070-202ENSMUST00000149914 2146 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
Col6a4A2AX52 Vmn1r46-202ENSMUST00000205088 10770 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
Col6a4A2AX52 5830405F06Rik-201ENSMUST00000192753 1755 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
Col6a4A2AX52 Gm43831-201ENSMUST00000200461 2598 ntBASIC3.11□□□□□ -1.91
Col6a4A2AX52 Olfr588-ps1-201ENSMUST00000118682 4607 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 79.6 ms