Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 1700027F06Rik-201ENSMUST00000203901 243 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Scn8aQ9WTU3 Gm15927-204ENSMUST00000206075 372 ntTSL 3 BASIC3.81□□□□□ -1.8
Scn8aQ9WTU3 AC153948.1-201ENSMUST00000219080 3838 ntBASIC3.81□□□□□ -1.8
Scn8aQ9WTU3 Olfr943-201ENSMUST00000071617 1079 ntAPPRIS P2 TSL 3 BASIC3.81□□□□□ -1.8
Scn8aQ9WTU3 Olfr924-201ENSMUST00000072977 927 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Scn8aQ9WTU3 Olfr262-201ENSMUST00000087818 939 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Scn8aQ9WTU3 Gm12888-201ENSMUST00000097905 1181 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Scn8aQ9WTU3 Jrkl-201ENSMUST00000110582 3223 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Scn8aQ9WTU3 Gm5248-201ENSMUST00000186108 4046 ntBASIC3.81□□□□□ -1.8
Scn8aQ9WTU3 Gnpnat1-206ENSMUST00000227468 1490 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Scn8aQ9WTU3 Scfd1-201ENSMUST00000021335 2096 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Scn8aQ9WTU3 Olfr353-203ENSMUST00000217215 4173 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Scn8aQ9WTU3 Gm14816-201ENSMUST00000117174 294 ntBASIC3.8□□□□□ -1.8
Scn8aQ9WTU3 Olfr325-201ENSMUST00000169428 1065 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Scn8aQ9WTU3 1700020G17Rik-202ENSMUST00000190237 739 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Scn8aQ9WTU3 Gm37343-201ENSMUST00000192542 111 ntBASIC3.8□□□□□ -1.8
Scn8aQ9WTU3 Gm37239-201ENSMUST00000193510 141 ntBASIC3.8□□□□□ -1.8
Scn8aQ9WTU3 Mir7682-201ENSMUST00000198467 58 ntBASIC3.8□□□□□ -1.8
Scn8aQ9WTU3 Gm44355-201ENSMUST00000200417 104 ntBASIC3.8□□□□□ -1.8
Scn8aQ9WTU3 Gm18997-201ENSMUST00000216353 822 ntBASIC3.8□□□□□ -1.8
Scn8aQ9WTU3 AC107864.1-201ENSMUST00000217937 496 ntBASIC3.8□□□□□ -1.8
Scn8aQ9WTU3 AC158686.2-201ENSMUST00000218599 976 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Scn8aQ9WTU3 AC153979.1-201ENSMUST00000219684 242 ntTSL 5 BASIC3.8□□□□□ -1.8
Scn8aQ9WTU3 AC125379.1-201ENSMUST00000221928 111 ntBASIC3.8□□□□□ -1.8
Scn8aQ9WTU3 Gm6361-201ENSMUST00000091031 435 ntBASIC3.8□□□□□ -1.8
Scn8aQ9WTU3 Ntrk3-201ENSMUST00000039431 19703 ntAPPRIS P2 TSL 1 (best) BASIC3.8□□□□□ -1.8
Scn8aQ9WTU3 Olfr1211-204ENSMUST00000215205 4220 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Scn8aQ9WTU3 Gm43883-201ENSMUST00000204002 3750 ntBASIC3.8□□□□□ -1.8
Scn8aQ9WTU3 Erbin-207ENSMUST00000191275 5552 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
Scn8aQ9WTU3 Olfr588-ps1-201ENSMUST00000118682 4607 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Scn8aQ9WTU3 Olfr102-202ENSMUST00000217590 2783 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Scn8aQ9WTU3 Ddx3y-201ENSMUST00000091190 4600 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Scn8aQ9WTU3 Olfr629-203ENSMUST00000216300 2277 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Scn8aQ9WTU3 Olfr418-202ENSMUST00000213420 4388 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Scn8aQ9WTU3 Usp34-208ENSMUST00000180046 12200 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Scn8aQ9WTU3 Vmn1r45-205ENSMUST00000227571 2757 ntBASIC3.8□□□□□ -1.8
Scn8aQ9WTU3 Gm14659-201ENSMUST00000117667 843 ntBASIC3.8□□□□□ -1.8
Scn8aQ9WTU3 Ifna-ps1-201ENSMUST00000119856 555 ntBASIC3.8□□□□□ -1.8
Scn8aQ9WTU3 Gm14655-201ENSMUST00000120124 578 ntBASIC3.8□□□□□ -1.8
Scn8aQ9WTU3 Gm24314-201ENSMUST00000158274 123 ntBASIC3.8□□□□□ -1.8
Scn8aQ9WTU3 Rian-211ENSMUST00000182737 699 ntTSL 3 BASIC3.8□□□□□ -1.8
Scn8aQ9WTU3 Trbv8-201ENSMUST00000194020 285 ntBASIC3.8□□□□□ -1.8
Scn8aQ9WTU3 4930563F08Rik-201ENSMUST00000198640 515 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Scn8aQ9WTU3 Gm43049-202ENSMUST00000198942 559 ntTSL 2 BASIC3.8□□□□□ -1.8
Scn8aQ9WTU3 Gm7380-201ENSMUST00000211599 466 ntBASIC3.8□□□□□ -1.8
Scn8aQ9WTU3 AC153971.2-201ENSMUST00000214553 777 ntBASIC3.8□□□□□ -1.8
Scn8aQ9WTU3 AC161245.1-201ENSMUST00000217207 740 ntTSL 3 BASIC3.8□□□□□ -1.8
Scn8aQ9WTU3 AC163354.1-207ENSMUST00000221270 1243 ntTSL 5 BASIC3.8□□□□□ -1.8
Scn8aQ9WTU3 Gm8231-201ENSMUST00000221617 783 ntBASIC3.8□□□□□ -1.8
Scn8aQ9WTU3 Gm26571-203ENSMUST00000221865 555 ntTSL 2 BASIC3.8□□□□□ -1.8
Scn8aQ9WTU3 Prl8a1-201ENSMUST00000006664 864 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Scn8aQ9WTU3 Hsfy2-201ENSMUST00000062085 1392 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Scn8aQ9WTU3 Cftr-204ENSMUST00000129452 2835 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Scn8aQ9WTU3 Gm4788-201ENSMUST00000027612 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
Scn8aQ9WTU3 Olfr149-202ENSMUST00000215192 2806 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Scn8aQ9WTU3 Gm15268-201ENSMUST00000118845 352 ntBASIC3.79□□□□□ -1.8
Scn8aQ9WTU3 Rps15a-ps3-201ENSMUST00000121072 395 ntBASIC3.79□□□□□ -1.8
Scn8aQ9WTU3 Gm10057-201ENSMUST00000144098 984 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
Scn8aQ9WTU3 Gm23753-201ENSMUST00000157575 149 ntBASIC3.79□□□□□ -1.8
Scn8aQ9WTU3 V1rd19-201ENSMUST00000173571 1157 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Scn8aQ9WTU3 Obox4-ps9-201ENSMUST00000176927 1136 ntBASIC3.79□□□□□ -1.8
Scn8aQ9WTU3 Gm26746-201ENSMUST00000181722 487 ntBASIC3.79□□□□□ -1.8
Scn8aQ9WTU3 Olfr936-202ENSMUST00000216912 937 ntBASIC3.79□□□□□ -1.8
Scn8aQ9WTU3 AC159238.1-201ENSMUST00000220699 343 ntTSL 3 BASIC3.79□□□□□ -1.8
Scn8aQ9WTU3 AC117656.3-202ENSMUST00000225842 1055 ntBASIC3.79□□□□□ -1.8
Scn8aQ9WTU3 AC130673.2-201ENSMUST00000228091 797 ntBASIC3.79□□□□□ -1.8
Scn8aQ9WTU3 Vmn1r49-201ENSMUST00000071865 933 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Scn8aQ9WTU3 Rpl32-ps-201ENSMUST00000091052 506 ntBASIC3.79□□□□□ -1.8
Scn8aQ9WTU3 Olfr107-203ENSMUST00000215947 3954 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Scn8aQ9WTU3 Olfr1428-202ENSMUST00000208391 1368 ntTSL 3 BASIC3.79□□□□□ -1.8
Scn8aQ9WTU3 Gm44800-201ENSMUST00000207510 1855 ntBASIC3.79□□□□□ -1.8
Scn8aQ9WTU3 Stag2-201ENSMUST00000069619 5825 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Scn8aQ9WTU3 Olfr769-203ENSMUST00000216906 4325 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Scn8aQ9WTU3 Gm14014-201ENSMUST00000156718 2717 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
Scn8aQ9WTU3 Gm43824-201ENSMUST00000199042 2588 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
Scn8aQ9WTU3 Glra3-201ENSMUST00000000275 6508 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Scn8aQ9WTU3 Olfr1368-202ENSMUST00000216039 1389 ntAPPRIS P1 TSL 3 BASIC3.78□□□□□ -1.8
Scn8aQ9WTU3 Serpinb6c-202ENSMUST00000172184 1327 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Scn8aQ9WTU3 Gm5943-201ENSMUST00000119458 459 ntBASIC3.78□□□□□ -1.8
Scn8aQ9WTU3 Gm13865-201ENSMUST00000120957 865 ntBASIC3.78□□□□□ -1.8
Scn8aQ9WTU3 Gm25105-201ENSMUST00000122477 130 ntBASIC3.78□□□□□ -1.8
Scn8aQ9WTU3 n-R5s68-201ENSMUST00000122639 82 ntBASIC3.78□□□□□ -1.8
Scn8aQ9WTU3 Gm23591-201ENSMUST00000157663 286 ntBASIC3.78□□□□□ -1.8
Scn8aQ9WTU3 Gm29007-201ENSMUST00000190633 679 ntTSL 5 BASIC3.78□□□□□ -1.8
Scn8aQ9WTU3 Gm28314-201ENSMUST00000191276 345 ntBASIC3.78□□□□□ -1.8
Scn8aQ9WTU3 Gm42610-201ENSMUST00000196557 650 ntTSL 3 BASIC3.78□□□□□ -1.8
Scn8aQ9WTU3 Gm44475-201ENSMUST00000204041 424 ntBASIC3.78□□□□□ -1.8
Scn8aQ9WTU3 AC155830.1-201ENSMUST00000220050 3836 ntBASIC3.78□□□□□ -1.8
Scn8aQ9WTU3 Olfr675-201ENSMUST00000073102 942 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Scn8aQ9WTU3 Gm26449-201ENSMUST00000082452 104 ntBASIC3.78□□□□□ -1.8
Scn8aQ9WTU3 Vmn1r202-202ENSMUST00000228020 5441 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Scn8aQ9WTU3 Vmn1r87-203ENSMUST00000227443 5319 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Scn8aQ9WTU3 Nlrp9a-204ENSMUST00000122040 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
Scn8aQ9WTU3 1810006J02Rik-201ENSMUST00000186473 1687 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
Scn8aQ9WTU3 Olfr1016-202ENSMUST00000216425 2698 ntAPPRIS P1 TSL 3 BASIC3.78□□□□□ -1.8
Scn8aQ9WTU3 Cbll1-201ENSMUST00000064240 3937 ntAPPRIS ALT1 TSL 5 BASIC3.78□□□□□ -1.8
Scn8aQ9WTU3 Gm13650-201ENSMUST00000117729 433 ntBASIC3.78□□□□□ -1.8
Scn8aQ9WTU3 Gm8757-201ENSMUST00000119660 372 ntBASIC3.78□□□□□ -1.8
Scn8aQ9WTU3 Gm26476-201ENSMUST00000122618 313 ntBASIC3.78□□□□□ -1.8
Scn8aQ9WTU3 Tarbp2-207ENSMUST00000142114 420 ntTSL 5 BASIC3.78□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 84.1 ms