Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Gm5552-201ENSMUST00000197149 515 ntBASIC6.05□□□□□ -1.44
Clp1Q99LI9 Gm6260-202ENSMUST00000197170 921 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Clp1Q99LI9 Pvrig-ps-201ENSMUST00000199472 204 ntBASIC6.05□□□□□ -1.44
Clp1Q99LI9 Gm43428-201ENSMUST00000200108 3845 ntBASIC6.05□□□□□ -1.44
Clp1Q99LI9 Gm45305-201ENSMUST00000209799 815 ntTSL 5 BASIC6.05□□□□□ -1.44
Clp1Q99LI9 Gm46102-201ENSMUST00000217005 731 ntTSL 5 BASIC6.05□□□□□ -1.44
Clp1Q99LI9 Gm33091-201ENSMUST00000217798 748 ntTSL 3 BASIC6.05□□□□□ -1.44
Clp1Q99LI9 AC132954.1-201ENSMUST00000221017 342 ntBASIC6.05□□□□□ -1.44
Clp1Q99LI9 AC116589.7-201ENSMUST00000221061 239 ntBASIC6.05□□□□□ -1.44
Clp1Q99LI9 AC164117.1-201ENSMUST00000221726 239 ntBASIC6.05□□□□□ -1.44
Clp1Q99LI9 Tpbpa-202ENSMUST00000225275 642 ntAPPRIS ALT2 BASIC6.05□□□□□ -1.44
Clp1Q99LI9 Ear2-201ENSMUST00000074839 719 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Clp1Q99LI9 Vmn1r86-201ENSMUST00000094828 951 ntAPPRIS P2 BASIC6.05□□□□□ -1.44
Clp1Q99LI9 Gm9386-201ENSMUST00000095195 381 ntBASIC6.05□□□□□ -1.44
Clp1Q99LI9 Olfr1095-201ENSMUST00000099874 927 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Clp1Q99LI9 Fap-201ENSMUST00000000402 2187 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
Clp1Q99LI9 Gm8700-201ENSMUST00000222187 3054 ntBASIC6.05□□□□□ -1.44
Clp1Q99LI9 Serpina6-201ENSMUST00000044159 1605 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Clp1Q99LI9 Gm37488-201ENSMUST00000195434 3374 ntBASIC6.05□□□□□ -1.44
Clp1Q99LI9 Gm10845-202ENSMUST00000228217 3389 ntBASIC6.05□□□□□ -1.44
Clp1Q99LI9 Vmn1r39-208ENSMUST00000228919 2105 ntAPPRIS ALT2 BASIC6.05□□□□□ -1.44
Clp1Q99LI9 Hephl1-201ENSMUST00000159985 5261 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Clp1Q99LI9 Olfr301-201ENSMUST00000174362 1937 ntAPPRIS P1 TSL 3 BASIC6.05□□□□□ -1.44
Clp1Q99LI9 Olfr1215-203ENSMUST00000216271 2608 ntAPPRIS P1 TSL 3 BASIC6.05□□□□□ -1.44
Clp1Q99LI9 Gm43874-201ENSMUST00000204853 2798 ntBASIC6.05□□□□□ -1.44
Clp1Q99LI9 Mpeg1-201ENSMUST00000081035 4335 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Clp1Q99LI9 Gm36888-201ENSMUST00000195819 2945 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Clp1Q99LI9 Slc24a2-203ENSMUST00000107157 10531 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Clp1Q99LI9 Rabgap1-202ENSMUST00000066055 4247 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Clp1Q99LI9 Mmp1a-201ENSMUST00000034492 2022 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Clp1Q99LI9 Ckap5-203ENSMUST00000111337 6384 ntTSL 5 BASIC6.04□□□□□ -1.44
Clp1Q99LI9 Olfr976-204ENSMUST00000217630 2952 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
Clp1Q99LI9 Gm43882-201ENSMUST00000204871 2264 ntBASIC6.04□□□□□ -1.44
Clp1Q99LI9 Zranb3-201ENSMUST00000086614 4210 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Clp1Q99LI9 4930550C14Rik-203ENSMUST00000215668 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Clp1Q99LI9 4933406B17Rik-201ENSMUST00000212602 4333 ntTSL 5 BASIC6.04□□□□□ -1.44
Clp1Q99LI9 Mir759-201ENSMUST00000103254 98 ntBASIC6.04□□□□□ -1.44
Clp1Q99LI9 Gm22499-201ENSMUST00000104501 135 ntBASIC6.04□□□□□ -1.44
Clp1Q99LI9 Tmco2-201ENSMUST00000106268 719 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Clp1Q99LI9 Glrb-202ENSMUST00000107743 1101 ntTSL 5 BASIC6.04□□□□□ -1.44
Clp1Q99LI9 Gm14385-201ENSMUST00000116315 876 ntBASIC6.04□□□□□ -1.44
Clp1Q99LI9 Gm25111-201ENSMUST00000116686 147 ntBASIC6.04□□□□□ -1.44
Clp1Q99LI9 Rpl7a-ps9-201ENSMUST00000117118 777 ntBASIC6.04□□□□□ -1.44
Clp1Q99LI9 Gm15195-201ENSMUST00000118775 263 ntBASIC6.04□□□□□ -1.44
Clp1Q99LI9 Gm12739-201ENSMUST00000119769 382 ntBASIC6.04□□□□□ -1.44
Clp1Q99LI9 Gm11909-201ENSMUST00000121424 759 ntBASIC6.04□□□□□ -1.44
Clp1Q99LI9 Gm13406-201ENSMUST00000121991 256 ntBASIC6.04□□□□□ -1.44
Clp1Q99LI9 Gm22208-201ENSMUST00000122658 110 ntBASIC6.04□□□□□ -1.44
Clp1Q99LI9 Hba-ps4-201ENSMUST00000128900 447 ntBASIC6.04□□□□□ -1.44
Clp1Q99LI9 Gm11381-201ENSMUST00000138574 420 ntTSL 5 BASIC6.04□□□□□ -1.44
Clp1Q99LI9 Lcp1-209ENSMUST00000145303 3841 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Clp1Q99LI9 Gm16035-201ENSMUST00000153879 401 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Clp1Q99LI9 1700013N06Rik-201ENSMUST00000156376 663 ntTSL 5 BASIC6.04□□□□□ -1.44
Clp1Q99LI9 Gm23954-201ENSMUST00000157213 353 ntBASIC6.04□□□□□ -1.44
Clp1Q99LI9 Gm25383-201ENSMUST00000157810 144 ntBASIC6.04□□□□□ -1.44
Clp1Q99LI9 Gm10319-202ENSMUST00000159439 846 ntBASIC6.04□□□□□ -1.44
Clp1Q99LI9 AY512915-204ENSMUST00000162315 676 ntTSL 3 BASIC6.04□□□□□ -1.44
Clp1Q99LI9 Pate1-201ENSMUST00000170021 389 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Clp1Q99LI9 Gm20543-201ENSMUST00000174200 726 ntBASIC6.04□□□□□ -1.44
Clp1Q99LI9 Mir3066-201ENSMUST00000175296 83 ntBASIC6.04□□□□□ -1.44
Clp1Q99LI9 Gm29031-201ENSMUST00000185316 614 ntBASIC6.04□□□□□ -1.44
Clp1Q99LI9 Gm29000-201ENSMUST00000185444 614 ntBASIC6.04□□□□□ -1.44
Clp1Q99LI9 Gm28204-201ENSMUST00000185934 614 ntBASIC6.04□□□□□ -1.44
Clp1Q99LI9 Gm28290-201ENSMUST00000186505 614 ntBASIC6.04□□□□□ -1.44
Clp1Q99LI9 Gm28161-201ENSMUST00000186669 614 ntBASIC6.04□□□□□ -1.44
Clp1Q99LI9 Gm28749-209ENSMUST00000189599 614 ntBASIC6.04□□□□□ -1.44
Clp1Q99LI9 Gm37757-201ENSMUST00000193072 210 ntBASIC6.04□□□□□ -1.44
Clp1Q99LI9 Gm33163-201ENSMUST00000194504 614 ntBASIC6.04□□□□□ -1.44
Clp1Q99LI9 Gm8747-201ENSMUST00000195392 751 ntBASIC6.04□□□□□ -1.44
Clp1Q99LI9 Gm33952-201ENSMUST00000197795 408 ntBASIC6.04□□□□□ -1.44
Clp1Q99LI9 Gm43710-201ENSMUST00000199583 452 ntBASIC6.04□□□□□ -1.44
Clp1Q99LI9 Gm44539-201ENSMUST00000206010 238 ntBASIC6.04□□□□□ -1.44
Clp1Q99LI9 Gm18468-201ENSMUST00000207321 369 ntBASIC6.04□□□□□ -1.44
Clp1Q99LI9 Gm18470-201ENSMUST00000207467 420 ntBASIC6.04□□□□□ -1.44
Clp1Q99LI9 Gm18465-201ENSMUST00000207468 369 ntBASIC6.04□□□□□ -1.44
Clp1Q99LI9 Gm18464-201ENSMUST00000207803 420 ntBASIC6.04□□□□□ -1.44
Clp1Q99LI9 Gm18458-201ENSMUST00000207908 369 ntBASIC6.04□□□□□ -1.44
Clp1Q99LI9 Gm18461-201ENSMUST00000208421 420 ntBASIC6.04□□□□□ -1.44
Clp1Q99LI9 Gm45402-201ENSMUST00000211796 223 ntBASIC6.04□□□□□ -1.44
Clp1Q99LI9 Gm2436-201ENSMUST00000219562 774 ntBASIC6.04□□□□□ -1.44
Clp1Q99LI9 Gm5955-201ENSMUST00000222712 219 ntBASIC6.04□□□□□ -1.44
Clp1Q99LI9 AC238676.3-201ENSMUST00000223042 154 ntBASIC6.04□□□□□ -1.44
Clp1Q99LI9 AC115289.1-201ENSMUST00000224915 522 ntBASIC6.04□□□□□ -1.44
Clp1Q99LI9 2010005H15Rik-201ENSMUST00000063539 294 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Clp1Q99LI9 Gm23404-201ENSMUST00000082543 97 ntBASIC6.04□□□□□ -1.44
Clp1Q99LI9 Gm4017-201ENSMUST00000084813 338 ntBASIC6.04□□□□□ -1.44
Clp1Q99LI9 CT025686.2-201ENSMUST00000227898 3315 ntBASIC6.04□□□□□ -1.44
Clp1Q99LI9 Zpld1-202ENSMUST00000143914 2697 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Clp1Q99LI9 A730004F24Rik-202ENSMUST00000195454 1704 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Clp1Q99LI9 AC123858.1-201ENSMUST00000226948 1874 ntBASIC6.04□□□□□ -1.44
Clp1Q99LI9 CT009757.5-201ENSMUST00000221858 3425 ntBASIC6.04□□□□□ -1.44
Clp1Q99LI9 Gm37268-201ENSMUST00000192254 2614 ntBASIC6.04□□□□□ -1.44
Clp1Q99LI9 Adam25-201ENSMUST00000096663 2621 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Clp1Q99LI9 Olfr126-202ENSMUST00000213844 1958 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Clp1Q99LI9 Cul3-202ENSMUST00000164108 2442 ntTSL 5 BASIC6.04□□□□□ -1.44
Clp1Q99LI9 Vmn2r89-202ENSMUST00000159734 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Clp1Q99LI9 Rbpj-202ENSMUST00000087360 5252 ntTSL 5 BASIC6.04□□□□□ -1.44
Clp1Q99LI9 Olfr235-204ENSMUST00000214613 2217 ntAPPRIS P1 TSL 3 BASIC6.03□□□□□ -1.44
Clp1Q99LI9 Gm15638-201ENSMUST00000128159 2062 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Clp1Q99LI9 Vmn1r45-204ENSMUST00000227426 3205 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 86 ms