Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Gm14362-201ENSMUST00000121679 273 ntBASIC5.08□□□□□ -1.6
Ndc1Q8VCB1 Gm9225-201ENSMUST00000121921 836 ntBASIC5.08□□□□□ -1.6
Ndc1Q8VCB1 Gm24635-201ENSMUST00000122712 128 ntBASIC5.08□□□□□ -1.6
Ndc1Q8VCB1 Gm15899-201ENSMUST00000128586 238 ntBASIC5.08□□□□□ -1.6
Ndc1Q8VCB1 Gm11234-201ENSMUST00000141030 845 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Ndc1Q8VCB1 Gm15254-201ENSMUST00000149567 273 ntBASIC5.08□□□□□ -1.6
Ndc1Q8VCB1 Ptprtos-201ENSMUST00000151688 630 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Ndc1Q8VCB1 G630016G05Rik-201ENSMUST00000152412 796 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Ndc1Q8VCB1 Gm22916-201ENSMUST00000157616 119 ntBASIC5.08□□□□□ -1.6
Ndc1Q8VCB1 Gm24860-201ENSMUST00000158457 276 ntBASIC5.08□□□□□ -1.6
Ndc1Q8VCB1 Gm23024-201ENSMUST00000158770 292 ntBASIC5.08□□□□□ -1.6
Ndc1Q8VCB1 Gm7609-204ENSMUST00000161424 461 ntBASIC5.08□□□□□ -1.6
Ndc1Q8VCB1 Gm6486-201ENSMUST00000166202 434 ntBASIC5.08□□□□□ -1.6
Ndc1Q8VCB1 Gm17907-201ENSMUST00000173150 710 ntBASIC5.08□□□□□ -1.6
Ndc1Q8VCB1 Gm8221-201ENSMUST00000178052 564 ntBASIC5.08□□□□□ -1.6
Ndc1Q8VCB1 Mir6903-201ENSMUST00000183597 88 ntBASIC5.08□□□□□ -1.6
Ndc1Q8VCB1 Mir6401-201ENSMUST00000184499 109 ntBASIC5.08□□□□□ -1.6
Ndc1Q8VCB1 Zfp-ps-201ENSMUST00000185025 478 ntBASIC5.08□□□□□ -1.6
Ndc1Q8VCB1 Gm27588-201ENSMUST00000185096 263 ntBASIC5.08□□□□□ -1.6
Ndc1Q8VCB1 Gm28873-201ENSMUST00000186130 667 ntTSL 2 BASIC5.08□□□□□ -1.6
Ndc1Q8VCB1 1810044D09Rik-201ENSMUST00000186472 486 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Ndc1Q8VCB1 Ighv3-7-201ENSMUST00000193370 348 ntBASIC5.08□□□□□ -1.6
Ndc1Q8VCB1 Trbv8-201ENSMUST00000194020 285 ntBASIC5.08□□□□□ -1.6
Ndc1Q8VCB1 Igkv15-101-201ENSMUST00000195917 299 ntBASIC5.08□□□□□ -1.6
Ndc1Q8VCB1 4921527H02Rik-202ENSMUST00000196005 947 ntBASIC5.08□□□□□ -1.6
Ndc1Q8VCB1 Gm43574-201ENSMUST00000196226 809 ntTSL 3 BASIC5.08□□□□□ -1.6
Ndc1Q8VCB1 Gm33952-201ENSMUST00000197795 408 ntBASIC5.08□□□□□ -1.6
Ndc1Q8VCB1 Mir6994-201ENSMUST00000198985 73 ntBASIC5.08□□□□□ -1.6
Ndc1Q8VCB1 Gm19649-201ENSMUST00000201126 822 ntBASIC5.08□□□□□ -1.6
Ndc1Q8VCB1 Gm29848-201ENSMUST00000203107 295 ntBASIC5.08□□□□□ -1.6
Ndc1Q8VCB1 Gm44654-201ENSMUST00000208052 329 ntBASIC5.08□□□□□ -1.6
Ndc1Q8VCB1 Ifitm6-202ENSMUST00000209328 678 ntAPPRIS P2 TSL 5 BASIC5.08□□□□□ -1.6
Ndc1Q8VCB1 Gm3690-201ENSMUST00000211341 262 ntBASIC5.08□□□□□ -1.6
Ndc1Q8VCB1 AC138284.2-201ENSMUST00000213982 567 ntBASIC5.08□□□□□ -1.6
Ndc1Q8VCB1 AC125041.1-201ENSMUST00000218264 876 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Ndc1Q8VCB1 Gm19256-201ENSMUST00000218550 231 ntBASIC5.08□□□□□ -1.6
Ndc1Q8VCB1 AC116460.1-201ENSMUST00000219040 313 ntBASIC5.08□□□□□ -1.6
Ndc1Q8VCB1 Gm40692-201ENSMUST00000220411 491 ntBASIC5.08□□□□□ -1.6
Ndc1Q8VCB1 Gm6049-201ENSMUST00000222369 458 ntBASIC5.08□□□□□ -1.6
Ndc1Q8VCB1 AC116656.1-201ENSMUST00000227040 755 ntBASIC5.08□□□□□ -1.6
Ndc1Q8VCB1 Ear14-201ENSMUST00000049559 468 ntBASIC5.08□□□□□ -1.6
Ndc1Q8VCB1 Rpl21-ps13-201ENSMUST00000072532 483 ntBASIC5.08□□□□□ -1.6
Ndc1Q8VCB1 Gm24622-201ENSMUST00000082619 162 ntBASIC5.08□□□□□ -1.6
Ndc1Q8VCB1 n-R5s88-201ENSMUST00000083173 118 ntBASIC5.08□□□□□ -1.6
Ndc1Q8VCB1 Gm7676-201ENSMUST00000084055 319 ntBASIC5.08□□□□□ -1.6
Ndc1Q8VCB1 Olfr767-202ENSMUST00000213579 5493 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Ndc1Q8VCB1 Gm13103-201ENSMUST00000094522 1833 ntAPPRIS P2 TSL 1 (best) BASIC5.08□□□□□ -1.6
Ndc1Q8VCB1 Olfr1173-201ENSMUST00000099830 2268 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Ndc1Q8VCB1 Ankrd12-201ENSMUST00000038116 8991 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Ndc1Q8VCB1 Gm44587-201ENSMUST00000207399 1685 ntBASIC5.08□□□□□ -1.6
Ndc1Q8VCB1 Olfr1355-201ENSMUST00000078414 3317 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
Ndc1Q8VCB1 Gm4759-201ENSMUST00000183414 6622 ntBASIC5.08□□□□□ -1.6
Ndc1Q8VCB1 Mrgprb1-201ENSMUST00000094384 4185 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Ndc1Q8VCB1 Gab3-203ENSMUST00000114109 2093 ntTSL 2 BASIC5.08□□□□□ -1.6
Ndc1Q8VCB1 Gm3985-201ENSMUST00000132101 2515 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Ndc1Q8VCB1 Gm29084-201ENSMUST00000185587 1452 ntBASIC5.07□□□□□ -1.6
Ndc1Q8VCB1 Speer5-ps1-201ENSMUST00000169525 1430 ntBASIC5.07□□□□□ -1.6
Ndc1Q8VCB1 Gm7919-201ENSMUST00000202043 1389 ntBASIC5.07□□□□□ -1.6
Ndc1Q8VCB1 Vmn2r34-201ENSMUST00000173459 3616 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Ndc1Q8VCB1 Senp7-203ENSMUST00000089362 4825 ntAPPRIS P2 TSL 1 (best) BASIC5.07□□□□□ -1.6
Ndc1Q8VCB1 AC162467.3-201ENSMUST00000219716 2172 ntBASIC5.07□□□□□ -1.6
Ndc1Q8VCB1 Gm14867-201ENSMUST00000120156 866 ntBASIC5.07□□□□□ -1.6
Ndc1Q8VCB1 Gm11805-201ENSMUST00000121238 600 ntBASIC5.07□□□□□ -1.6
Ndc1Q8VCB1 Gm14012-201ENSMUST00000136025 677 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Ndc1Q8VCB1 4430402I18Rik-203ENSMUST00000160542 1057 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Ndc1Q8VCB1 5730522E02Rik-208ENSMUST00000179180 450 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
Ndc1Q8VCB1 Mir6343-201ENSMUST00000183584 84 ntBASIC5.07□□□□□ -1.6
Ndc1Q8VCB1 Gm27541-201ENSMUST00000184078 122 ntBASIC5.07□□□□□ -1.6
Ndc1Q8VCB1 Gm17954-201ENSMUST00000195893 607 ntBASIC5.07□□□□□ -1.6
Ndc1Q8VCB1 Gm40190-201ENSMUST00000196570 471 ntTSL 2 BASIC5.07□□□□□ -1.6
Ndc1Q8VCB1 Gm30043-201ENSMUST00000196689 733 ntTSL 2 BASIC5.07□□□□□ -1.6
Ndc1Q8VCB1 Gm44110-201ENSMUST00000203871 475 ntTSL 2 BASIC5.07□□□□□ -1.6
Ndc1Q8VCB1 Gm17737-201ENSMUST00000210183 1147 ntBASIC5.07□□□□□ -1.6
Ndc1Q8VCB1 Gm7706-202ENSMUST00000211278 590 ntTSL 3 BASIC5.07□□□□□ -1.6
Ndc1Q8VCB1 Gm17890-201ENSMUST00000221419 757 ntBASIC5.07□□□□□ -1.6
Ndc1Q8VCB1 Defb8-201ENSMUST00000033854 287 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Ndc1Q8VCB1 1110012L19Rik-201ENSMUST00000053981 1094 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Ndc1Q8VCB1 Gm4779-201ENSMUST00000056225 672 ntTSL 5 BASIC5.07□□□□□ -1.6
Ndc1Q8VCB1 Gm10717-201ENSMUST00000075573 684 ntTSL 5 BASIC5.07□□□□□ -1.6
Ndc1Q8VCB1 Olfr1148-201ENSMUST00000077580 945 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Ndc1Q8VCB1 mt-Nd6-201ENSMUST00000082419 519 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Ndc1Q8VCB1 Gm23503-201ENSMUST00000083903 107 ntBASIC5.07□□□□□ -1.6
Ndc1Q8VCB1 Nlrp4c-202ENSMUST00000121583 3373 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Ndc1Q8VCB1 Olfr1328-202ENSMUST00000215312 5038 ntAPPRIS ALT1 TSL 5 BASIC5.07□□□□□ -1.6
Ndc1Q8VCB1 Gm7792-201ENSMUST00000201555 2473 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Ndc1Q8VCB1 Gm37551-201ENSMUST00000195556 2861 ntBASIC5.07□□□□□ -1.6
Ndc1Q8VCB1 Platr25-202ENSMUST00000220733 2859 ntAPPRIS P5 TSL 5 BASIC5.07□□□□□ -1.6
Ndc1Q8VCB1 Cfap70-203ENSMUST00000056073 3615 ntAPPRIS P4 TSL 1 (best) BASIC5.07□□□□□ -1.6
Ndc1Q8VCB1 Zfp607a-203ENSMUST00000205715 4031 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Ndc1Q8VCB1 Gm6853-202ENSMUST00000211360 4375 ntTSL 5 BASIC5.07□□□□□ -1.6
Ndc1Q8VCB1 2900079G21Rik-204ENSMUST00000163302 2764 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Ndc1Q8VCB1 Olfr1466-202ENSMUST00000207124 1981 ntAPPRIS P1 TSL 3 BASIC5.07□□□□□ -1.6
Ndc1Q8VCB1 Gm21292-201ENSMUST00000171947 1563 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Ndc1Q8VCB1 Mtx3-201ENSMUST00000076169 6275 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Ndc1Q8VCB1 Olfr1357-202ENSMUST00000203305 2286 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Ndc1Q8VCB1 Atp7a-201ENSMUST00000055941 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
Ndc1Q8VCB1 4930533I22Rik-201ENSMUST00000176290 2564 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Ndc1Q8VCB1 Alg11-201ENSMUST00000072572 4960 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Ndc1Q8VCB1 Gm2832-201ENSMUST00000172412 1760 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Ndc1Q8VCB1 Olfr391-ps-201ENSMUST00000214485 2080 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 64.6 ms