Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 1700017N19Rik-210ENSMUST00000218464 1597 ntTSL 5 BASIC5.39□□□□□ -1.55
Ccdc9Q8VC31 Gm4788-201ENSMUST00000027612 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
Ccdc9Q8VC31 Trbv21-201ENSMUST00000103278 290 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Ccdc9Q8VC31 Igkv12-98-201ENSMUST00000103327 344 ntAPPRIS ALT2 BASIC5.39□□□□□ -1.55
Ccdc9Q8VC31 Gm13023-202ENSMUST00000105770 833 ntAPPRIS ALT2 TSL 2 BASIC5.39□□□□□ -1.55
Ccdc9Q8VC31 Olfr133-201ENSMUST00000113636 1090 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Ccdc9Q8VC31 Olfr1296-ps1-201ENSMUST00000117697 939 ntBASIC5.39□□□□□ -1.55
Ccdc9Q8VC31 Rpl23a-ps14-201ENSMUST00000118777 424 ntBASIC5.39□□□□□ -1.55
Ccdc9Q8VC31 Gm14601-201ENSMUST00000120892 236 ntBASIC5.39□□□□□ -1.55
Ccdc9Q8VC31 Ufm1-202ENSMUST00000122330 637 ntTSL 2 BASIC5.39□□□□□ -1.55
Ccdc9Q8VC31 Gm23429-201ENSMUST00000122486 149 ntBASIC5.39□□□□□ -1.55
Ccdc9Q8VC31 Nr6a1os-202ENSMUST00000151229 525 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Ccdc9Q8VC31 Gm25865-201ENSMUST00000158247 104 ntBASIC5.39□□□□□ -1.55
Ccdc9Q8VC31 Gm17142-201ENSMUST00000164933 645 ntBASIC5.39□□□□□ -1.55
Ccdc9Q8VC31 Olfr296-ps1-201ENSMUST00000173904 1102 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Ccdc9Q8VC31 Gm28385-201ENSMUST00000185671 292 ntBASIC5.39□□□□□ -1.55
Ccdc9Q8VC31 Gm29570-201ENSMUST00000185813 681 ntTSL 3 BASIC5.39□□□□□ -1.55
Ccdc9Q8VC31 Gm28709-201ENSMUST00000186967 456 ntTSL 5 BASIC5.39□□□□□ -1.55
Ccdc9Q8VC31 Gm28981-201ENSMUST00000190863 1288 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Ccdc9Q8VC31 Gm28822-201ENSMUST00000191140 778 ntTSL 5 BASIC5.39□□□□□ -1.55
Ccdc9Q8VC31 Gm28181-201ENSMUST00000191460 687 ntTSL 3 BASIC5.39□□□□□ -1.55
Ccdc9Q8VC31 Ighv1-19-1-201ENSMUST00000192823 351 ntBASIC5.39□□□□□ -1.55
Ccdc9Q8VC31 Gm37421-201ENSMUST00000193088 132 ntBASIC5.39□□□□□ -1.55
Ccdc9Q8VC31 Ighv1-35-201ENSMUST00000195265 351 ntBASIC5.39□□□□□ -1.55
Ccdc9Q8VC31 Gm44988-201ENSMUST00000203835 1161 ntBASIC5.39□□□□□ -1.55
Ccdc9Q8VC31 Olfr588-ps1-202ENSMUST00000210115 912 ntBASIC5.39□□□□□ -1.55
Ccdc9Q8VC31 AC127337.1-201ENSMUST00000220423 625 ntTSL 2 BASIC5.39□□□□□ -1.55
Ccdc9Q8VC31 AC159622.3-201ENSMUST00000221010 361 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Ccdc9Q8VC31 AC163646.1-201ENSMUST00000227704 397 ntBASIC5.39□□□□□ -1.55
Ccdc9Q8VC31 Tas2r139-201ENSMUST00000057686 960 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Ccdc9Q8VC31 Olfr1463-201ENSMUST00000064102 933 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Ccdc9Q8VC31 Etd-201ENSMUST00000074232 478 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
Ccdc9Q8VC31 n-R5s220-201ENSMUST00000082926 120 ntBASIC5.39□□□□□ -1.55
Ccdc9Q8VC31 Spata22-202ENSMUST00000092926 1274 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Ccdc9Q8VC31 Tas2r140-201ENSMUST00000095391 1000 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Ccdc9Q8VC31 Olfr599-201ENSMUST00000098201 1050 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Ccdc9Q8VC31 Defb26-201ENSMUST00000099205 561 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Ccdc9Q8VC31 Olfr1033-204ENSMUST00000215682 3625 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Ccdc9Q8VC31 Gm10256-201ENSMUST00000179404 1358 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Ccdc9Q8VC31 CAAA01194877.1-201ENSMUST00000213137 4233 ntBASIC5.39□□□□□ -1.55
Ccdc9Q8VC31 Gm27013-202ENSMUST00000205067 1436 ntBASIC5.39□□□□□ -1.55
Ccdc9Q8VC31 Gm830-201ENSMUST00000142458 3502 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Ccdc9Q8VC31 Nlrp4f-201ENSMUST00000037372 3527 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Ccdc9Q8VC31 Fam205c-202ENSMUST00000107978 1451 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
Ccdc9Q8VC31 Olfr1277-202ENSMUST00000214760 5944 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Ccdc9Q8VC31 Srsy-201ENSMUST00000179900 1618 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Ccdc9Q8VC31 Epyc-201ENSMUST00000020094 1723 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Ccdc9Q8VC31 Lrrtm2-201ENSMUST00000091636 5665 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Ccdc9Q8VC31 Gm9733-201ENSMUST00000108361 618 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Ccdc9Q8VC31 Gm11433-201ENSMUST00000118318 228 ntBASIC5.38□□□□□ -1.55
Ccdc9Q8VC31 Gm2288-201ENSMUST00000118560 638 ntBASIC5.38□□□□□ -1.55
Ccdc9Q8VC31 Gm7657-201ENSMUST00000118851 666 ntBASIC5.38□□□□□ -1.55
Ccdc9Q8VC31 Gm12577-201ENSMUST00000119701 574 ntBASIC5.38□□□□□ -1.55
Ccdc9Q8VC31 Mup-ps21-201ENSMUST00000119998 448 ntBASIC5.38□□□□□ -1.55
Ccdc9Q8VC31 Gm14605-201ENSMUST00000120599 268 ntBASIC5.38□□□□□ -1.55
Ccdc9Q8VC31 4933417A18Rik-201ENSMUST00000160279 1045 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Ccdc9Q8VC31 Gm3123-201ENSMUST00000163480 480 ntBASIC5.38□□□□□ -1.55
Ccdc9Q8VC31 I0C0044D17Rik-202ENSMUST00000168045 510 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Ccdc9Q8VC31 Mir6715-201ENSMUST00000184990 57 ntBASIC5.38□□□□□ -1.55
Ccdc9Q8VC31 Gm28872-201ENSMUST00000191518 158 ntBASIC5.38□□□□□ -1.55
Ccdc9Q8VC31 Gm28060-201ENSMUST00000191554 189 ntBASIC5.38□□□□□ -1.55
Ccdc9Q8VC31 Igkv13-61-1-201ENSMUST00000198255 296 ntBASIC5.38□□□□□ -1.55
Ccdc9Q8VC31 Gm44330-201ENSMUST00000200106 143 ntBASIC5.38□□□□□ -1.55
Ccdc9Q8VC31 Gm18215-201ENSMUST00000204429 798 ntBASIC5.38□□□□□ -1.55
Ccdc9Q8VC31 1700095K22Rik-201ENSMUST00000206808 282 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Ccdc9Q8VC31 Gm44693-201ENSMUST00000208141 460 ntTSL 3 BASIC5.38□□□□□ -1.55
Ccdc9Q8VC31 Gm17911-201ENSMUST00000210806 877 ntBASIC5.38□□□□□ -1.55
Ccdc9Q8VC31 Gm45435-201ENSMUST00000211147 475 ntTSL 5 BASIC5.38□□□□□ -1.55
Ccdc9Q8VC31 AC112956.1-201ENSMUST00000213563 492 ntBASIC5.38□□□□□ -1.55
Ccdc9Q8VC31 AC154296.3-201ENSMUST00000214427 712 ntBASIC5.38□□□□□ -1.55
Ccdc9Q8VC31 AL603630.1-201ENSMUST00000214781 147 ntBASIC5.38□□□□□ -1.55
Ccdc9Q8VC31 AC111046.1-201ENSMUST00000217715 412 ntBASIC5.38□□□□□ -1.55
Ccdc9Q8VC31 Gm32283-201ENSMUST00000218861 549 ntTSL 5 BASIC5.38□□□□□ -1.55
Ccdc9Q8VC31 Lilr4b-211ENSMUST00000219661 1143 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Ccdc9Q8VC31 AC125190.2-201ENSMUST00000221160 497 ntBASIC5.38□□□□□ -1.55
Ccdc9Q8VC31 AC140210.1-201ENSMUST00000224961 534 ntBASIC5.38□□□□□ -1.55
Ccdc9Q8VC31 Spata19-201ENSMUST00000034473 697 ntAPPRIS P2 TSL 1 (best) BASIC5.38□□□□□ -1.55
Ccdc9Q8VC31 Olfr748-201ENSMUST00000073561 924 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Ccdc9Q8VC31 Olfr1205-201ENSMUST00000076438 924 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Ccdc9Q8VC31 Olfr347-201ENSMUST00000078761 943 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Ccdc9Q8VC31 Olfr814-201ENSMUST00000081367 933 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Ccdc9Q8VC31 Olfr885-201ENSMUST00000081985 930 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Ccdc9Q8VC31 Snora31-201ENSMUST00000083213 130 ntBASIC5.38□□□□□ -1.55
Ccdc9Q8VC31 Mir188-201ENSMUST00000083464 68 ntBASIC5.38□□□□□ -1.55
Ccdc9Q8VC31 Vmn1r125-201ENSMUST00000098739 924 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Ccdc9Q8VC31 Vmn1r32-201ENSMUST00000079584 2833 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Ccdc9Q8VC31 Zfp595-201ENSMUST00000109735 3896 ntAPPRIS P2 TSL 1 (best) BASIC5.38□□□□□ -1.55
Ccdc9Q8VC31 9630002D21Rik-202ENSMUST00000222033 2345 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Ccdc9Q8VC31 Gm37192-201ENSMUST00000194479 1348 ntBASIC5.38□□□□□ -1.55
Ccdc9Q8VC31 Gm9597-202ENSMUST00000227632 1387 ntBASIC5.38□□□□□ -1.55
Ccdc9Q8VC31 Olfr1484-204ENSMUST00000216014 3842 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
Ccdc9Q8VC31 Gm21778-202ENSMUST00000185926 1482 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Ccdc9Q8VC31 Olfr1355-201ENSMUST00000078414 3317 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
Ccdc9Q8VC31 Gm16421-201ENSMUST00000117616 1557 ntBASIC5.38□□□□□ -1.55
Ccdc9Q8VC31 Olfr1196-203ENSMUST00000216977 4225 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Ccdc9Q8VC31 Gm43527-201ENSMUST00000198749 3178 ntBASIC5.37□□□□□ -1.55
Ccdc9Q8VC31 Skint4-202ENSMUST00000106564 3997 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
Ccdc9Q8VC31 Skint4-204ENSMUST00000106566 3997 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
Ccdc9Q8VC31 Gm21033-201ENSMUST00000208590 2608 ntBASIC5.37□□□□□ -1.55
Ccdc9Q8VC31 A230085B16Rik-201ENSMUST00000209781 1856 ntBASIC5.37□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 91.8 ms