Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Rbm41-201ENSMUST00000033810 2787 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Trim47Q8C0E3 Aadacl3-201ENSMUST00000105749 3153 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
Trim47Q8C0E3 Ifi204-201ENSMUST00000111214 2296 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
Trim47Q8C0E3 Gm38198-201ENSMUST00000191772 3581 ntBASIC6.47□□□□□ -1.37
Trim47Q8C0E3 Ints6l-202ENSMUST00000101553 3201 ntTSL 2 BASIC6.47□□□□□ -1.37
Trim47Q8C0E3 Cylc1-201ENSMUST00000101282 1923 ntAPPRIS P2 TSL 1 (best) BASIC6.47□□□□□ -1.37
Trim47Q8C0E3 Gm37686-201ENSMUST00000194099 2309 ntBASIC6.47□□□□□ -1.37
Trim47Q8C0E3 Gm15660-201ENSMUST00000118997 478 ntBASIC6.47□□□□□ -1.37
Trim47Q8C0E3 Gm12482-201ENSMUST00000120435 630 ntBASIC6.47□□□□□ -1.37
Trim47Q8C0E3 Gm8545-201ENSMUST00000120692 801 ntBASIC6.47□□□□□ -1.37
Trim47Q8C0E3 Gm12872-201ENSMUST00000121835 320 ntBASIC6.47□□□□□ -1.37
Trim47Q8C0E3 Gm15335-201ENSMUST00000122442 411 ntBASIC6.47□□□□□ -1.37
Trim47Q8C0E3 n-R5s48-201ENSMUST00000122482 110 ntBASIC6.47□□□□□ -1.37
Trim47Q8C0E3 Gm12609-201ENSMUST00000129908 610 ntTSL 2 BASIC6.47□□□□□ -1.37
Trim47Q8C0E3 Gm25334-201ENSMUST00000158036 110 ntBASIC6.47□□□□□ -1.37
Trim47Q8C0E3 Gm24976-201ENSMUST00000158972 135 ntBASIC6.47□□□□□ -1.37
Trim47Q8C0E3 Gm15812-201ENSMUST00000162331 748 ntBASIC6.47□□□□□ -1.37
Trim47Q8C0E3 Gm17109-201ENSMUST00000163985 358 ntBASIC6.47□□□□□ -1.37
Trim47Q8C0E3 Gm18343-201ENSMUST00000172802 604 ntBASIC6.47□□□□□ -1.37
Trim47Q8C0E3 Gm27679-201ENSMUST00000184612 84 ntBASIC6.47□□□□□ -1.37
Trim47Q8C0E3 Gm8419-201ENSMUST00000189886 412 ntBASIC6.47□□□□□ -1.37
Trim47Q8C0E3 Gm28640-201ENSMUST00000190918 550 ntBASIC6.47□□□□□ -1.37
Trim47Q8C0E3 Gm37336-202ENSMUST00000193705 468 ntBASIC6.47□□□□□ -1.37
Trim47Q8C0E3 Gm32754-202ENSMUST00000199504 480 ntTSL 5 BASIC6.47□□□□□ -1.37
Trim47Q8C0E3 Gm45738-201ENSMUST00000203645 233 ntTSL 5 BASIC6.47□□□□□ -1.37
Trim47Q8C0E3 Gm44997-202ENSMUST00000205970 425 ntTSL 3 BASIC6.47□□□□□ -1.37
Trim47Q8C0E3 Gm18306-201ENSMUST00000207338 569 ntBASIC6.47□□□□□ -1.37
Trim47Q8C0E3 B130024G19Rik-205ENSMUST00000207952 485 ntTSL 3 BASIC6.47□□□□□ -1.37
Trim47Q8C0E3 AC152415.1-201ENSMUST00000213320 440 ntBASIC6.47□□□□□ -1.37
Trim47Q8C0E3 AC171206.2-201ENSMUST00000215252 389 ntBASIC6.47□□□□□ -1.37
Trim47Q8C0E3 AC124445.1-201ENSMUST00000218613 452 ntBASIC6.47□□□□□ -1.37
Trim47Q8C0E3 AC174797.2-203ENSMUST00000224017 716 ntBASIC6.47□□□□□ -1.37
Trim47Q8C0E3 AC129017.1-201ENSMUST00000228363 270 ntBASIC6.47□□□□□ -1.37
Trim47Q8C0E3 Olfr655-201ENSMUST00000057385 927 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Trim47Q8C0E3 Gm24610-201ENSMUST00000083270 109 ntBASIC6.47□□□□□ -1.37
Trim47Q8C0E3 Meis1-208ENSMUST00000177417 5308 ntTSL 5 BASIC6.47□□□□□ -1.37
Trim47Q8C0E3 Efcab2-201ENSMUST00000027775 3580 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Trim47Q8C0E3 Gm10165-201ENSMUST00000217666 2380 ntTSL 2 BASIC6.47□□□□□ -1.37
Trim47Q8C0E3 Ube2u-201ENSMUST00000092730 1435 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Trim47Q8C0E3 Cep55-201ENSMUST00000096096 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
Trim47Q8C0E3 Gm44193-201ENSMUST00000204822 2523 ntBASIC6.47□□□□□ -1.37
Trim47Q8C0E3 Cxcl15-201ENSMUST00000031322 2127 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Trim47Q8C0E3 Wdr17-202ENSMUST00000127511 4668 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
Trim47Q8C0E3 Pigb-201ENSMUST00000093819 2866 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Trim47Q8C0E3 Zbbx-204ENSMUST00000107778 2467 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
Trim47Q8C0E3 Olfr753-ps1-203ENSMUST00000208970 2764 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.37
Trim47Q8C0E3 Olfr137-202ENSMUST00000213505 2514 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.37
Trim47Q8C0E3 Gm7451-201ENSMUST00000208382 1392 ntBASIC6.46□□□□□ -1.37
Trim47Q8C0E3 Gm46136-202ENSMUST00000217053 6329 ntTSL 5 BASIC6.46□□□□□ -1.37
Trim47Q8C0E3 Stx17-202ENSMUST00000107720 5770 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
Trim47Q8C0E3 Vmn2r113-201ENSMUST00000170322 2571 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Trim47Q8C0E3 Skil-204ENSMUST00000118470 6578 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
Trim47Q8C0E3 Igkv1-99-201ENSMUST00000103326 359 ntAPPRIS ALT2 BASIC6.46□□□□□ -1.38
Trim47Q8C0E3 Hmgb1-ps2-201ENSMUST00000117548 636 ntBASIC6.46□□□□□ -1.38
Trim47Q8C0E3 Gm6893-201ENSMUST00000118385 522 ntBASIC6.46□□□□□ -1.38
Trim47Q8C0E3 Hmgb1-ps3-201ENSMUST00000118415 636 ntBASIC6.46□□□□□ -1.38
Trim47Q8C0E3 Gm5942-201ENSMUST00000120046 439 ntBASIC6.46□□□□□ -1.38
Trim47Q8C0E3 Gm15387-201ENSMUST00000120421 648 ntBASIC6.46□□□□□ -1.38
Trim47Q8C0E3 Gm15177-201ENSMUST00000120491 577 ntBASIC6.46□□□□□ -1.38
Trim47Q8C0E3 Mup-ps28-201ENSMUST00000120686 289 ntBASIC6.46□□□□□ -1.38
Trim47Q8C0E3 Gm6565-201ENSMUST00000121217 438 ntBASIC6.46□□□□□ -1.38
Trim47Q8C0E3 Gm23213-201ENSMUST00000122715 313 ntBASIC6.46□□□□□ -1.38
Trim47Q8C0E3 Gm23465-201ENSMUST00000157134 262 ntBASIC6.46□□□□□ -1.38
Trim47Q8C0E3 Gm24001-201ENSMUST00000158463 85 ntBASIC6.46□□□□□ -1.38
Trim47Q8C0E3 Hmgb1-ps9-201ENSMUST00000179479 645 ntBASIC6.46□□□□□ -1.38
Trim47Q8C0E3 Gm6501-201ENSMUST00000187178 916 ntBASIC6.46□□□□□ -1.38
Trim47Q8C0E3 Gm29433-201ENSMUST00000191241 253 ntTSL 5 BASIC6.46□□□□□ -1.38
Trim47Q8C0E3 Gm38185-201ENSMUST00000193195 694 ntBASIC6.46□□□□□ -1.38
Trim47Q8C0E3 Fabp9-203ENSMUST00000193487 486 ntTSL 3 BASIC6.46□□□□□ -1.38
Trim47Q8C0E3 Gm37375-201ENSMUST00000193859 387 ntBASIC6.46□□□□□ -1.38
Trim47Q8C0E3 Gm5842-201ENSMUST00000195073 622 ntBASIC6.46□□□□□ -1.38
Trim47Q8C0E3 Gm37385-201ENSMUST00000195223 387 ntBASIC6.46□□□□□ -1.38
Trim47Q8C0E3 Mir6906-201ENSMUST00000198998 58 ntBASIC6.46□□□□□ -1.38
Trim47Q8C0E3 Gm43215-201ENSMUST00000199108 252 ntBASIC6.46□□□□□ -1.38
Trim47Q8C0E3 Gm43798-201ENSMUST00000202056 394 ntBASIC6.46□□□□□ -1.38
Trim47Q8C0E3 Gm36840-201ENSMUST00000202688 250 ntTSL 3 BASIC6.46□□□□□ -1.38
Trim47Q8C0E3 Gm43919-201ENSMUST00000204303 364 ntBASIC6.46□□□□□ -1.38
Trim47Q8C0E3 Gm7380-201ENSMUST00000211599 466 ntBASIC6.46□□□□□ -1.38
Trim47Q8C0E3 AC166358.9-201ENSMUST00000220653 375 ntBASIC6.46□□□□□ -1.38
Trim47Q8C0E3 AC107711.2-203ENSMUST00000227827 762 ntBASIC6.46□□□□□ -1.38
Trim47Q8C0E3 Sprr2f-201ENSMUST00000050397 609 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Trim47Q8C0E3 Gm16335-201ENSMUST00000077495 309 ntBASIC6.46□□□□□ -1.38
Trim47Q8C0E3 Gm22973-201ENSMUST00000083298 191 ntBASIC6.46□□□□□ -1.38
Trim47Q8C0E3 Gm5518-201ENSMUST00000084171 648 ntBASIC6.46□□□□□ -1.38
Trim47Q8C0E3 Defb41-201ENSMUST00000088463 467 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Trim47Q8C0E3 Gm6361-201ENSMUST00000091031 435 ntBASIC6.46□□□□□ -1.38
Trim47Q8C0E3 Rbms3-206ENSMUST00000111773 7908 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
Trim47Q8C0E3 Obox3-202ENSMUST00000095217 1603 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Trim47Q8C0E3 Olfr1140-203ENSMUST00000217572 1327 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
Trim47Q8C0E3 Cnga1-204ENSMUST00000169997 2251 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
Trim47Q8C0E3 Olfr705-203ENSMUST00000216009 3085 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
Trim47Q8C0E3 Ercc6l-201ENSMUST00000056904 5302 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Trim47Q8C0E3 Phkb-201ENSMUST00000053771 5351 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Trim47Q8C0E3 Serpina10-201ENSMUST00000044231 3498 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Trim47Q8C0E3 Diaph2-202ENSMUST00000113320 8196 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
Trim47Q8C0E3 Robo2-210ENSMUST00000226478 8059 ntBASIC6.45□□□□□ -1.38
Trim47Q8C0E3 Speer5-ps1-203ENSMUST00000217649 7431 ntTSL 5 BASIC6.45□□□□□ -1.38
Trim47Q8C0E3 Mcf2-201ENSMUST00000033478 3659 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
Trim47Q8C0E3 Mfap3-203ENSMUST00000108849 4827 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Trim47Q8C0E3 Gm7903-202ENSMUST00000179953 3519 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 62.4 ms