Protein–RNA interactions for Protein: Q80XJ3

Ttc28, Tetratricopeptide repeat protein 28, mousemouse

Predictions only

Length 2,450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc28Q80XJ3 Obox4-ps19-201ENSMUST00000178284 1140 ntBASIC3.24□□□□□ -1.89
Ttc28Q80XJ3 Cldn34c2-201ENSMUST00000178457 702 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Ttc28Q80XJ3 Gm24019-201ENSMUST00000178620 107 ntBASIC3.24□□□□□ -1.89
Ttc28Q80XJ3 Gm26243-201ENSMUST00000179260 107 ntBASIC3.24□□□□□ -1.89
Ttc28Q80XJ3 Obox4-ps20-201ENSMUST00000179591 1140 ntBASIC3.24□□□□□ -1.89
Ttc28Q80XJ3 Obox4-ps21-201ENSMUST00000179856 1140 ntBASIC3.24□□□□□ -1.89
Ttc28Q80XJ3 Gm28072-202ENSMUST00000190486 352 ntTSL 5 BASIC3.24□□□□□ -1.89
Ttc28Q80XJ3 AC115750.1-201ENSMUST00000220441 567 ntBASIC3.24□□□□□ -1.89
Ttc28Q80XJ3 AC174797.3-202ENSMUST00000224578 587 ntBASIC3.24□□□□□ -1.89
Ttc28Q80XJ3 AC154634.3-201ENSMUST00000224589 736 ntBASIC3.24□□□□□ -1.89
Ttc28Q80XJ3 Gm23296-201ENSMUST00000082555 107 ntBASIC3.24□□□□□ -1.89
Ttc28Q80XJ3 Gm24859-201ENSMUST00000082729 107 ntBASIC3.24□□□□□ -1.89
Ttc28Q80XJ3 Gm45061-201ENSMUST00000204395 2095 ntBASIC3.24□□□□□ -1.89
Ttc28Q80XJ3 Trappc13-205ENSMUST00000144060 3538 ntAPPRIS ALT1 TSL 1 (best) BASIC3.23□□□□□ -1.89
Ttc28Q80XJ3 Ddx60-202ENSMUST00000093485 5989 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
Ttc28Q80XJ3 0610010F05Rik-202ENSMUST00000093267 3646 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
Ttc28Q80XJ3 Cp-203ENSMUST00000108325 3183 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
Ttc28Q80XJ3 A530099J19Rik-201ENSMUST00000151029 2764 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
Ttc28Q80XJ3 Vmn2r50-202ENSMUST00000086298 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
Ttc28Q80XJ3 Vmn1r35-204ENSMUST00000227749 2254 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Ttc28Q80XJ3 Gabrb1-201ENSMUST00000031122 13737 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
Ttc28Q80XJ3 5330437M03Rik-201ENSMUST00000201318 4083 ntBASIC3.23□□□□□ -1.89
Ttc28Q80XJ3 Gm12087-201ENSMUST00000121878 258 ntBASIC3.23□□□□□ -1.89
Ttc28Q80XJ3 Gm24937-201ENSMUST00000122597 134 ntBASIC3.23□□□□□ -1.89
Ttc28Q80XJ3 Amy2a1-201ENSMUST00000132353 890 ntAPPRIS P1 TSL 2 BASIC3.23□□□□□ -1.89
Ttc28Q80XJ3 Gm17210-201ENSMUST00000169975 391 ntTSL 3 BASIC3.23□□□□□ -1.89
Ttc28Q80XJ3 Gm2056-201ENSMUST00000178852 435 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Ttc28Q80XJ3 Olfr32-205ENSMUST00000215659 2998 ntAPPRIS P1 TSL 3 BASIC3.23□□□□□ -1.89
Ttc28Q80XJ3 Rpl26-ps6-201ENSMUST00000216693 434 ntBASIC3.23□□□□□ -1.89
Ttc28Q80XJ3 Vmn1r185-209ENSMUST00000228133 5749 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Ttc28Q80XJ3 Olfr689-202ENSMUST00000215413 5819 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Ttc28Q80XJ3 AI987944-204ENSMUST00000206801 1701 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
Ttc28Q80XJ3 Ccar1-201ENSMUST00000020268 4352 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
Ttc28Q80XJ3 Tmem45a-201ENSMUST00000023435 2701 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
Ttc28Q80XJ3 Foxp2-203ENSMUST00000115470 2692 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
Ttc28Q80XJ3 Olfr397-202ENSMUST00000213134 4048 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Ttc28Q80XJ3 Gm14661-201ENSMUST00000152669 2051 ntTSL 5 BASIC3.23□□□□□ -1.89
Ttc28Q80XJ3 Fus-202ENSMUST00000079045 2623 ntBASIC3.23□□□□□ -1.89
Ttc28Q80XJ3 Olfr609-203ENSMUST00000216360 3295 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Ttc28Q80XJ3 Gm17106-201ENSMUST00000105610 459 ntTSL 5 BASIC3.22□□□□□ -1.89
Ttc28Q80XJ3 Gm13386-201ENSMUST00000117677 124 ntBASIC3.22□□□□□ -1.89
Ttc28Q80XJ3 Gm13443-201ENSMUST00000120770 555 ntBASIC3.22□□□□□ -1.89
Ttc28Q80XJ3 Gm5392-201ENSMUST00000122189 789 ntBASIC3.22□□□□□ -1.89
Ttc28Q80XJ3 Gm14003-201ENSMUST00000130919 313 ntTSL 3 BASIC3.22□□□□□ -1.89
Ttc28Q80XJ3 Gm12865-201ENSMUST00000137353 326 ntTSL 2 BASIC3.22□□□□□ -1.89
Ttc28Q80XJ3 Gm15946-201ENSMUST00000160654 423 ntBASIC3.22□□□□□ -1.89
Ttc28Q80XJ3 Trbv8-201ENSMUST00000194020 285 ntBASIC3.22□□□□□ -1.89
Ttc28Q80XJ3 Gm43825-201ENSMUST00000199650 734 ntBASIC3.22□□□□□ -1.89
Ttc28Q80XJ3 Olfr682-ps1-202ENSMUST00000214399 897 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Ttc28Q80XJ3 AC165366.1-201ENSMUST00000225905 505 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Ttc28Q80XJ3 Snord59a-201ENSMUST00000082844 74 ntBASIC3.22□□□□□ -1.89
Ttc28Q80XJ3 Cdh7-201ENSMUST00000027542 3390 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
Ttc28Q80XJ3 Hm629797-201ENSMUST00000183645 2398 ntBASIC3.22□□□□□ -1.89
Ttc28Q80XJ3 Zfp759-201ENSMUST00000052716 3482 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
Ttc28Q80XJ3 Olfr959-202ENSMUST00000215194 4339 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Ttc28Q80XJ3 Gm12010-201ENSMUST00000122400 2017 ntBASIC3.22□□□□□ -1.89
Ttc28Q80XJ3 AC131068.3-201ENSMUST00000228438 1456 ntBASIC3.22□□□□□ -1.89
Ttc28Q80XJ3 Vmn1r213-202ENSMUST00000227573 3515 ntAPPRIS ALT2 BASIC3.22□□□□□ -1.89
Ttc28Q80XJ3 Olfr986-204ENSMUST00000218134 3487 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Ttc28Q80XJ3 AC152981.1-201ENSMUST00000218320 2480 ntBASIC3.22□□□□□ -1.89
Ttc28Q80XJ3 Gm43824-201ENSMUST00000199042 2588 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
Ttc28Q80XJ3 Gm15262-202ENSMUST00000207320 5010 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Ttc28Q80XJ3 Olfr354-202ENSMUST00000217479 9539 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Ttc28Q80XJ3 4930522H14Rik-202ENSMUST00000102725 854 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
Ttc28Q80XJ3 Acbd7-201ENSMUST00000115089 531 ntAPPRIS P2 TSL 1 (best) BASIC3.22□□□□□ -1.89
Ttc28Q80XJ3 Gm12902-201ENSMUST00000118389 322 ntBASIC3.22□□□□□ -1.89
Ttc28Q80XJ3 Gm8757-201ENSMUST00000119660 372 ntBASIC3.22□□□□□ -1.89
Ttc28Q80XJ3 Gm14926-201ENSMUST00000120650 508 ntBASIC3.22□□□□□ -1.89
Ttc28Q80XJ3 Gm12505-201ENSMUST00000146041 757 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
Ttc28Q80XJ3 Gm29062-201ENSMUST00000186032 694 ntBASIC3.22□□□□□ -1.89
Ttc28Q80XJ3 Gm28255-201ENSMUST00000187101 694 ntBASIC3.22□□□□□ -1.89
Ttc28Q80XJ3 Gm29545-201ENSMUST00000188878 694 ntBASIC3.22□□□□□ -1.89
Ttc28Q80XJ3 Gm32391-201ENSMUST00000191839 540 ntTSL 2 BASIC3.22□□□□□ -1.89
Ttc28Q80XJ3 Gm45157-201ENSMUST00000208729 401 ntBASIC3.22□□□□□ -1.89
Ttc28Q80XJ3 AC123835.1-201ENSMUST00000214362 670 ntBASIC3.22□□□□□ -1.89
Ttc28Q80XJ3 AL669916.5-201ENSMUST00000214874 361 ntBASIC3.22□□□□□ -1.89
Ttc28Q80XJ3 AC154598.1-201ENSMUST00000227079 347 ntBASIC3.22□□□□□ -1.89
Ttc28Q80XJ3 Olfr818-201ENSMUST00000074308 957 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Ttc28Q80XJ3 Hhla1-201ENSMUST00000100584 2262 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
Ttc28Q80XJ3 AF366264-201ENSMUST00000071308 3157 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Ttc28Q80XJ3 Olfr361-202ENSMUST00000214969 2749 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Ttc28Q80XJ3 Gm20631-201ENSMUST00000177239 5697 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
Ttc28Q80XJ3 Zfy2-202ENSMUST00000187148 2846 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
Ttc28Q80XJ3 Gm11233-201ENSMUST00000122357 634 ntBASIC3.21□□□□□ -1.89
Ttc28Q80XJ3 Olfr861-ps1-201ENSMUST00000212783 928 ntBASIC3.21□□□□□ -1.89
Ttc28Q80XJ3 Gm5176-201ENSMUST00000218244 1227 ntBASIC3.21□□□□□ -1.89
Ttc28Q80XJ3 AC122840.3-201ENSMUST00000221474 486 ntTSL 5 BASIC3.21□□□□□ -1.89
Ttc28Q80XJ3 AC159252.1-201ENSMUST00000224450 553 ntBASIC3.21□□□□□ -1.89
Ttc28Q80XJ3 AC102815.1-201ENSMUST00000226662 1061 ntBASIC3.21□□□□□ -1.89
Ttc28Q80XJ3 4931408C20Rik-201ENSMUST00000097801 4318 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
Ttc28Q80XJ3 Olfr675-203ENSMUST00000214318 3828 ntTSL 5 BASIC3.21□□□□□ -1.9
Ttc28Q80XJ3 Nat1-201ENSMUST00000026677 1347 ntAPPRIS P2 BASIC3.21□□□□□ -1.9
Ttc28Q80XJ3 Depdc1a-203ENSMUST00000120272 3323 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
Ttc28Q80XJ3 Neb-202ENSMUST00000036934 22489 ntAPPRIS P2 TSL 5 BASIC3.21□□□□□ -1.9
Ttc28Q80XJ3 Cr2-202ENSMUST00000082321 6207 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
Ttc28Q80XJ3 Gm28074-201ENSMUST00000190424 1497 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
Ttc28Q80XJ3 Vmn1r171-203ENSMUST00000226321 3067 ntAPPRIS ALT2 BASIC3.21□□□□□ -1.9
Ttc28Q80XJ3 Olfr1457-203ENSMUST00000214561 1829 ntTSL 5 BASIC3.21□□□□□ -1.9
Ttc28Q80XJ3 Gm3089-201ENSMUST00000200804 1395 ntBASIC3.21□□□□□ -1.9
Ttc28Q80XJ3 Gm3302-201ENSMUST00000201462 1395 ntBASIC3.21□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 86.5 ms