Protein–RNA interactions for Protein: Q80VI1

Trim56, E3 ubiquitin-protein ligase TRIM56, mousemouse

Known RBP Predictions only

Length 734 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56Q80VI1 Btf3l4-204ENSMUST00000102742 3141 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Trim56Q80VI1 Gm37357-201ENSMUST00000192386 3123 ntBASIC6.16□□□□□ -1.42
Trim56Q80VI1 Defb30-201ENSMUST00000100490 307 ntAPPRIS P2 TSL 1 (best) BASIC6.16□□□□□ -1.42
Trim56Q80VI1 Igkv10-96-201ENSMUST00000103328 359 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Trim56Q80VI1 Gm12578-201ENSMUST00000121244 417 ntBASIC6.16□□□□□ -1.42
Trim56Q80VI1 4930597A21Rik-201ENSMUST00000128652 698 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Trim56Q80VI1 Gm11714-201ENSMUST00000136927 876 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Trim56Q80VI1 Gm11680-201ENSMUST00000146550 439 ntTSL 5 BASIC6.16□□□□□ -1.42
Trim56Q80VI1 Gm24175-201ENSMUST00000158931 129 ntBASIC6.16□□□□□ -1.42
Trim56Q80VI1 Gm27355-201ENSMUST00000185045 128 ntBASIC6.16□□□□□ -1.42
Trim56Q80VI1 Gm10193-201ENSMUST00000188288 231 ntBASIC6.16□□□□□ -1.42
Trim56Q80VI1 Gm28151-201ENSMUST00000189404 951 ntBASIC6.16□□□□□ -1.42
Trim56Q80VI1 Gm20162-201ENSMUST00000193629 871 ntBASIC6.16□□□□□ -1.42
Trim56Q80VI1 Smr2-203ENSMUST00000196477 676 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
Trim56Q80VI1 Gm6719-201ENSMUST00000202067 335 ntBASIC6.16□□□□□ -1.42
Trim56Q80VI1 Gm6850-201ENSMUST00000210031 530 ntBASIC6.16□□□□□ -1.42
Trim56Q80VI1 Gm45829-201ENSMUST00000212466 334 ntTSL 5 BASIC6.16□□□□□ -1.42
Trim56Q80VI1 2900078I11Rik-201ENSMUST00000214556 999 ntBASIC6.16□□□□□ -1.42
Trim56Q80VI1 Gm29154-234ENSMUST00000215272 750 ntTSL 5 BASIC6.16□□□□□ -1.42
Trim56Q80VI1 AC154600.1-201ENSMUST00000226480 714 ntBASIC6.16□□□□□ -1.42
Trim56Q80VI1 AC137117.1-201ENSMUST00000226912 441 ntBASIC6.16□□□□□ -1.42
Trim56Q80VI1 Olfr1022-201ENSMUST00000054736 948 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Trim56Q80VI1 Olfr875-201ENSMUST00000080634 1004 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Trim56Q80VI1 Olfr885-201ENSMUST00000081985 930 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Trim56Q80VI1 Gm22364-201ENSMUST00000083097 98 ntBASIC6.16□□□□□ -1.42
Trim56Q80VI1 Gm25859-201ENSMUST00000083710 91 ntBASIC6.16□□□□□ -1.42
Trim56Q80VI1 Smr2-201ENSMUST00000087043 676 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
Trim56Q80VI1 Tas2r115-201ENSMUST00000095394 1033 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Trim56Q80VI1 Ccdc152-202ENSMUST00000226261 1327 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Trim56Q80VI1 Tdrd12-204ENSMUST00000193633 3651 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Trim56Q80VI1 Ktn1-225ENSMUST00000191446 4021 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
Trim56Q80VI1 Atr-213ENSMUST00000215311 8102 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Trim56Q80VI1 Asap1-210ENSMUST00000176384 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
Trim56Q80VI1 Olfr1537-202ENSMUST00000213472 4114 ntAPPRIS ALT2 TSL 2 BASIC6.16□□□□□ -1.42
Trim56Q80VI1 AC151734.1-201ENSMUST00000227023 1740 ntBASIC6.16□□□□□ -1.42
Trim56Q80VI1 Gm18853-201ENSMUST00000183629 3596 ntBASIC6.16□□□□□ -1.42
Trim56Q80VI1 Gm37551-201ENSMUST00000195556 2861 ntBASIC6.16□□□□□ -1.42
Trim56Q80VI1 Zfp442-201ENSMUST00000109916 2922 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Trim56Q80VI1 Ndst3-203ENSMUST00000132112 4460 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Trim56Q80VI1 Vmn1r71-201ENSMUST00000079113 4996 ntAPPRIS P2 BASIC6.15□□□□□ -1.42
Trim56Q80VI1 Prrg1-210ENSMUST00000177904 3851 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.42
Trim56Q80VI1 9630002D21Rik-202ENSMUST00000222033 2345 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Trim56Q80VI1 Gm43130-201ENSMUST00000197721 3907 ntBASIC6.15□□□□□ -1.42
Trim56Q80VI1 Gm17308-201ENSMUST00000181749 1997 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Trim56Q80VI1 Gm37509-201ENSMUST00000194867 3169 ntBASIC6.15□□□□□ -1.42
Trim56Q80VI1 Olfr671-202ENSMUST00000210963 3157 ntTSL 5 BASIC6.15□□□□□ -1.42
Trim56Q80VI1 A430027C01Rik-201ENSMUST00000194599 1644 ntBASIC6.15□□□□□ -1.42
Trim56Q80VI1 Cr2-208ENSMUST00000195120 6212 ntTSL 5 BASIC6.15□□□□□ -1.42
Trim56Q80VI1 Cyp2j12-201ENSMUST00000097972 1675 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
Trim56Q80VI1 Olfr393-201ENSMUST00000102523 939 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
Trim56Q80VI1 Trav14d-3-dv8-201ENSMUST00000103608 456 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
Trim56Q80VI1 Gm24170-201ENSMUST00000104124 133 ntBASIC6.15□□□□□ -1.42
Trim56Q80VI1 Gm14172-201ENSMUST00000118255 644 ntBASIC6.15□□□□□ -1.42
Trim56Q80VI1 Xlr3e-ps-201ENSMUST00000119644 682 ntBASIC6.15□□□□□ -1.42
Trim56Q80VI1 Gm13482-201ENSMUST00000119842 254 ntBASIC6.15□□□□□ -1.42
Trim56Q80VI1 Gm14362-201ENSMUST00000121679 273 ntBASIC6.15□□□□□ -1.42
Trim56Q80VI1 Xlr3d-ps-201ENSMUST00000121687 658 ntBASIC6.15□□□□□ -1.42
Trim56Q80VI1 n-R5s98-201ENSMUST00000122549 119 ntBASIC6.15□□□□□ -1.42
Trim56Q80VI1 Gm15254-201ENSMUST00000149567 273 ntBASIC6.15□□□□□ -1.42
Trim56Q80VI1 Gm22236-201ENSMUST00000157093 106 ntBASIC6.15□□□□□ -1.42
Trim56Q80VI1 Gm23993-201ENSMUST00000157478 144 ntBASIC6.15□□□□□ -1.42
Trim56Q80VI1 Gm23852-201ENSMUST00000158376 77 ntBASIC6.15□□□□□ -1.42
Trim56Q80VI1 Gm23354-201ENSMUST00000158426 104 ntBASIC6.15□□□□□ -1.42
Trim56Q80VI1 Gm23583-201ENSMUST00000158533 289 ntBASIC6.15□□□□□ -1.42
Trim56Q80VI1 Gm22945-201ENSMUST00000158557 157 ntBASIC6.15□□□□□ -1.42
Trim56Q80VI1 Gm5709-201ENSMUST00000177879 1165 ntBASIC6.15□□□□□ -1.42
Trim56Q80VI1 BC065403-201ENSMUST00000180997 1022 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Trim56Q80VI1 Pou6f2-206ENSMUST00000184299 793 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Trim56Q80VI1 Gm28994-201ENSMUST00000188556 621 ntTSL 5 BASIC6.15□□□□□ -1.42
Trim56Q80VI1 Gm31415-201ENSMUST00000194963 344 ntTSL 5 BASIC6.15□□□□□ -1.42
Trim56Q80VI1 Gm31026-201ENSMUST00000198762 821 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Trim56Q80VI1 Gm42459-201ENSMUST00000199679 742 ntBASIC6.15□□□□□ -1.42
Trim56Q80VI1 Gm8041-201ENSMUST00000199755 616 ntBASIC6.15□□□□□ -1.42
Trim56Q80VI1 Klrb1b-204ENSMUST00000205130 917 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
Trim56Q80VI1 Gm44776-201ENSMUST00000207212 381 ntBASIC6.15□□□□□ -1.42
Trim56Q80VI1 Gm45530-201ENSMUST00000211658 225 ntBASIC6.15□□□□□ -1.42
Trim56Q80VI1 AC145731.1-201ENSMUST00000214083 344 ntTSL 5 BASIC6.15□□□□□ -1.42
Trim56Q80VI1 Gm5750-201ENSMUST00000218711 801 ntBASIC6.15□□□□□ -1.42
Trim56Q80VI1 Gm18247-201ENSMUST00000222937 601 ntBASIC6.15□□□□□ -1.42
Trim56Q80VI1 Olfr736-201ENSMUST00000058965 939 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
Trim56Q80VI1 Olfr972-201ENSMUST00000079767 945 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
Trim56Q80VI1 Gm26107-201ENSMUST00000083972 107 ntBASIC6.15□□□□□ -1.42
Trim56Q80VI1 Defb25-201ENSMUST00000099203 293 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Trim56Q80VI1 Ryr3-201ENSMUST00000080673 15422 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.42
Trim56Q80VI1 Gm15337-201ENSMUST00000135378 3888 ntTSL 5 BASIC6.15□□□□□ -1.42
Trim56Q80VI1 Pold3-209ENSMUST00000208670 1716 ntTSL 5 BASIC6.15□□□□□ -1.42
Trim56Q80VI1 Gm6215-201ENSMUST00000119297 1386 ntBASIC6.15□□□□□ -1.43
Trim56Q80VI1 Gm7905-201ENSMUST00000119933 1386 ntBASIC6.15□□□□□ -1.43
Trim56Q80VI1 Gm6207-201ENSMUST00000120075 1386 ntBASIC6.15□□□□□ -1.43
Trim56Q80VI1 Gm6228-201ENSMUST00000178856 1386 ntBASIC6.15□□□□□ -1.43
Trim56Q80VI1 Gm6221-201ENSMUST00000180064 1386 ntBASIC6.15□□□□□ -1.43
Trim56Q80VI1 Mbnl1-214ENSMUST00000193517 5151 ntAPPRIS ALT1 TSL 5 BASIC6.15□□□□□ -1.43
Trim56Q80VI1 Iqch-203ENSMUST00000163624 3339 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.43
Trim56Q80VI1 Gm43886-201ENSMUST00000205039 2386 ntBASIC6.15□□□□□ -1.43
Trim56Q80VI1 A530083M17Rik-201ENSMUST00000199877 3376 ntBASIC6.15□□□□□ -1.43
Trim56Q80VI1 Son-205ENSMUST00000122302 2449 ntTSL 5 BASIC6.15□□□□□ -1.43
Trim56Q80VI1 4930533I22Rik-201ENSMUST00000176290 2564 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Trim56Q80VI1 Olfr1242-202ENSMUST00000111540 2189 ntAPPRIS P1 TSL 3 BASIC6.14□□□□□ -1.43
Trim56Q80VI1 Gm29293-201ENSMUST00000189416 2188 ntBASIC6.14□□□□□ -1.43
Trim56Q80VI1 Nop58-215ENSMUST00000191142 9507 ntAPPRIS P2 TSL 1 (best) BASIC6.14□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 93.1 ms