Protein–RNA interactions for Protein: Q69ZI1

Sh3rf1, E3 ubiquitin-protein ligase SH3RF1, mousemouse

Predictions only

Length 892 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1Q69ZI1 AC102287.1-201ENSMUST00000211412 454 ntBASIC5.67□□□□□ -1.5
Sh3rf1Q69ZI1 4930591E09Rik-201ENSMUST00000215643 480 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Sh3rf1Q69ZI1 AC153141.1-201ENSMUST00000218636 501 ntBASIC5.67□□□□□ -1.5
Sh3rf1Q69ZI1 AC192616.2-201ENSMUST00000221482 3841 ntBASIC5.67□□□□□ -1.5
Sh3rf1Q69ZI1 Gm18413-201ENSMUST00000221573 655 ntBASIC5.67□□□□□ -1.5
Sh3rf1Q69ZI1 Prl-203ENSMUST00000224228 888 ntAPPRIS ALT2 BASIC5.67□□□□□ -1.5
Sh3rf1Q69ZI1 Otor-201ENSMUST00000028902 949 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Sh3rf1Q69ZI1 S100a9-201ENSMUST00000069960 512 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Sh3rf1Q69ZI1 Fxyd3-201ENSMUST00000072331 439 ntTSL 2 BASIC5.67□□□□□ -1.5
Sh3rf1Q69ZI1 Dph3b-ps-201ENSMUST00000076359 246 ntBASIC5.67□□□□□ -1.5
Sh3rf1Q69ZI1 Olfr1193-201ENSMUST00000081697 957 ntBASIC5.67□□□□□ -1.5
Sh3rf1Q69ZI1 Gm22423-201ENSMUST00000082861 184 ntBASIC5.67□□□□□ -1.5
Sh3rf1Q69ZI1 Olfr895-201ENSMUST00000093864 951 ntBASIC5.67□□□□□ -1.5
Sh3rf1Q69ZI1 Gm2912-201ENSMUST00000223472 1799 ntTSL 5 BASIC5.67□□□□□ -1.5
Sh3rf1Q69ZI1 Olfr1261-204ENSMUST00000216953 3176 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Sh3rf1Q69ZI1 Mug2-201ENSMUST00000081777 4579 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Sh3rf1Q69ZI1 Olfr1111-202ENSMUST00000214492 1616 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Sh3rf1Q69ZI1 A230107N01Rik-201ENSMUST00000180894 2348 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Sh3rf1Q69ZI1 AC117570.1-201ENSMUST00000214015 1886 ntTSL 5 BASIC5.66□□□□□ -1.5
Sh3rf1Q69ZI1 4930431P03Rik-202ENSMUST00000166127 4237 ntTSL 2 BASIC5.66□□□□□ -1.5
Sh3rf1Q69ZI1 Gm43359-201ENSMUST00000197944 2200 ntBASIC5.66□□□□□ -1.5
Sh3rf1Q69ZI1 Dopey1-201ENSMUST00000034987 8933 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Sh3rf1Q69ZI1 Ryr3-210ENSMUST00000208151 15370 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
Sh3rf1Q69ZI1 Gm38351-201ENSMUST00000195466 2518 ntBASIC5.66□□□□□ -1.5
Sh3rf1Q69ZI1 Sri-202ENSMUST00000088786 2504 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Sh3rf1Q69ZI1 Gm1720-201ENSMUST00000135086 1503 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Sh3rf1Q69ZI1 Gm23988-201ENSMUST00000117034 122 ntBASIC5.66□□□□□ -1.5
Sh3rf1Q69ZI1 Gm14681-201ENSMUST00000118047 411 ntBASIC5.66□□□□□ -1.5
Sh3rf1Q69ZI1 Olfr587-ps1-201ENSMUST00000118378 948 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Sh3rf1Q69ZI1 Gm15364-201ENSMUST00000119618 585 ntBASIC5.66□□□□□ -1.5
Sh3rf1Q69ZI1 Gm14534-201ENSMUST00000120045 357 ntBASIC5.66□□□□□ -1.5
Sh3rf1Q69ZI1 Gm16423-201ENSMUST00000120078 947 ntBASIC5.66□□□□□ -1.5
Sh3rf1Q69ZI1 Gm12482-201ENSMUST00000120435 630 ntBASIC5.66□□□□□ -1.5
Sh3rf1Q69ZI1 Gm13356-201ENSMUST00000121678 335 ntBASIC5.66□□□□□ -1.5
Sh3rf1Q69ZI1 Gm15335-201ENSMUST00000122442 411 ntBASIC5.66□□□□□ -1.5
Sh3rf1Q69ZI1 C030037D09Rik-201ENSMUST00000125967 367 ntTSL 5 BASIC5.66□□□□□ -1.5
Sh3rf1Q69ZI1 Gm15340-201ENSMUST00000144984 704 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Sh3rf1Q69ZI1 Gm26106-201ENSMUST00000157254 228 ntBASIC5.66□□□□□ -1.5
Sh3rf1Q69ZI1 Gm23499-201ENSMUST00000157736 268 ntBASIC5.66□□□□□ -1.5
Sh3rf1Q69ZI1 Gm3084-201ENSMUST00000169967 598 ntBASIC5.66□□□□□ -1.5
Sh3rf1Q69ZI1 Gm22584-201ENSMUST00000177935 92 ntBASIC5.66□□□□□ -1.5
Sh3rf1Q69ZI1 Gm25670-201ENSMUST00000178423 107 ntBASIC5.66□□□□□ -1.5
Sh3rf1Q69ZI1 Gm26239-201ENSMUST00000178842 107 ntBASIC5.66□□□□□ -1.5
Sh3rf1Q69ZI1 Gm24267-201ENSMUST00000179841 107 ntBASIC5.66□□□□□ -1.5
Sh3rf1Q69ZI1 Mdrl-201ENSMUST00000180483 1020 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Sh3rf1Q69ZI1 Gm27201-201ENSMUST00000183818 416 ntTSL 3 BASIC5.66□□□□□ -1.5
Sh3rf1Q69ZI1 Gm29134-201ENSMUST00000186579 126 ntBASIC5.66□□□□□ -1.5
Sh3rf1Q69ZI1 Gm28883-201ENSMUST00000189256 369 ntBASIC5.66□□□□□ -1.5
Sh3rf1Q69ZI1 Gm28357-201ENSMUST00000190256 622 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Sh3rf1Q69ZI1 Gm28188-201ENSMUST00000190483 236 ntBASIC5.66□□□□□ -1.5
Sh3rf1Q69ZI1 Gm28241-201ENSMUST00000190916 235 ntBASIC5.66□□□□□ -1.5
Sh3rf1Q69ZI1 1810006J02Rik-202ENSMUST00000191060 523 ntTSL 2 BASIC5.66□□□□□ -1.5
Sh3rf1Q69ZI1 Gm17781-201ENSMUST00000195232 649 ntBASIC5.66□□□□□ -1.5
Sh3rf1Q69ZI1 Gm36971-201ENSMUST00000195244 378 ntTSL 5 BASIC5.66□□□□□ -1.5
Sh3rf1Q69ZI1 Gm2053-201ENSMUST00000195671 631 ntBASIC5.66□□□□□ -1.5
Sh3rf1Q69ZI1 Igkv3-8-201ENSMUST00000197635 339 ntBASIC5.66□□□□□ -1.5
Sh3rf1Q69ZI1 Gm7181-201ENSMUST00000202197 434 ntBASIC5.66□□□□□ -1.5
Sh3rf1Q69ZI1 Gm29781-201ENSMUST00000203862 478 ntBASIC5.66□□□□□ -1.5
Sh3rf1Q69ZI1 Gm44634-201ENSMUST00000206119 152 ntBASIC5.66□□□□□ -1.5
Sh3rf1Q69ZI1 Gm44853-201ENSMUST00000209070 250 ntBASIC5.66□□□□□ -1.5
Sh3rf1Q69ZI1 Gm8523-201ENSMUST00000211386 552 ntBASIC5.66□□□□□ -1.5
Sh3rf1Q69ZI1 4930558N11Rik-204ENSMUST00000211512 516 ntTSL 3 BASIC5.66□□□□□ -1.5
Sh3rf1Q69ZI1 Ss18l2-204ENSMUST00000215104 315 ntTSL 5 BASIC5.66□□□□□ -1.5
Sh3rf1Q69ZI1 AC132474.2-201ENSMUST00000217414 573 ntTSL 5 BASIC5.66□□□□□ -1.5
Sh3rf1Q69ZI1 AC153800.1-201ENSMUST00000219212 365 ntBASIC5.66□□□□□ -1.5
Sh3rf1Q69ZI1 AC108401.1-201ENSMUST00000219740 361 ntTSL 3 BASIC5.66□□□□□ -1.5
Sh3rf1Q69ZI1 1700037F03Rik-201ENSMUST00000223032 365 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Sh3rf1Q69ZI1 AC158982.2-201ENSMUST00000226283 184 ntBASIC5.66□□□□□ -1.5
Sh3rf1Q69ZI1 AC139350.4-201ENSMUST00000228483 798 ntBASIC5.66□□□□□ -1.5
Sh3rf1Q69ZI1 AC126690.1-201ENSMUST00000228898 397 ntBASIC5.66□□□□□ -1.5
Sh3rf1Q69ZI1 Olfr748-201ENSMUST00000073561 924 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Sh3rf1Q69ZI1 Gm24207-201ENSMUST00000082781 108 ntBASIC5.66□□□□□ -1.5
Sh3rf1Q69ZI1 Gm24292-201ENSMUST00000082888 107 ntBASIC5.66□□□□□ -1.5
Sh3rf1Q69ZI1 Mir331-201ENSMUST00000083673 96 ntBASIC5.66□□□□□ -1.5
Sh3rf1Q69ZI1 Gm23502-201ENSMUST00000083902 145 ntBASIC5.66□□□□□ -1.5
Sh3rf1Q69ZI1 Gm17165-201ENSMUST00000096155 493 ntBASIC5.66□□□□□ -1.5
Sh3rf1Q69ZI1 Zfp442-202ENSMUST00000185796 1833 ntTSL 5 BASIC5.66□□□□□ -1.5
Sh3rf1Q69ZI1 Olfr221-205ENSMUST00000216907 2859 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Sh3rf1Q69ZI1 8430419K02Rik-201ENSMUST00000128654 1870 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Sh3rf1Q69ZI1 BC065397-203ENSMUST00000134066 3201 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Sh3rf1Q69ZI1 Vmn1r57-202ENSMUST00000227798 2409 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Sh3rf1Q69ZI1 Mboat2-204ENSMUST00000221952 6792 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Sh3rf1Q69ZI1 Prame-201ENSMUST00000033786 1395 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Sh3rf1Q69ZI1 Ccdc7a-205ENSMUST00000214889 5544 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
Sh3rf1Q69ZI1 Iqcb1-202ENSMUST00000114819 2797 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Sh3rf1Q69ZI1 S100pbp-201ENSMUST00000049081 2769 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Sh3rf1Q69ZI1 Olfr1056-202ENSMUST00000216547 2213 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Sh3rf1Q69ZI1 Gm44587-201ENSMUST00000207399 1685 ntBASIC5.66□□□□□ -1.5
Sh3rf1Q69ZI1 Spef2-201ENSMUST00000041840 4247 ntAPPRIS P2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Sh3rf1Q69ZI1 Olfr107-204ENSMUST00000215974 2282 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
Sh3rf1Q69ZI1 Vmn2r50-201ENSMUST00000074943 2586 ntAPPRIS P2 TSL 5 BASIC5.65□□□□□ -1.5
Sh3rf1Q69ZI1 Dock11-202ENSMUST00000115264 1725 ntTSL 5 BASIC5.65□□□□□ -1.5
Sh3rf1Q69ZI1 A730004F24Rik-202ENSMUST00000195454 1704 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Sh3rf1Q69ZI1 Cx3cr1-201ENSMUST00000064165 3753 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Sh3rf1Q69ZI1 Gm28082-201ENSMUST00000185683 1499 ntTSL 5 BASIC5.65□□□□□ -1.5
Sh3rf1Q69ZI1 Gm28679-201ENSMUST00000186013 1499 ntTSL 5 BASIC5.65□□□□□ -1.5
Sh3rf1Q69ZI1 Gm28135-201ENSMUST00000186847 1499 ntTSL 5 BASIC5.65□□□□□ -1.5
Sh3rf1Q69ZI1 Gm28291-202ENSMUST00000186921 1499 ntTSL 5 BASIC5.65□□□□□ -1.5
Sh3rf1Q69ZI1 Gm29219-201ENSMUST00000187224 1499 ntTSL 5 BASIC5.65□□□□□ -1.5
Sh3rf1Q69ZI1 Gm29547-201ENSMUST00000187258 1499 ntTSL 5 BASIC5.65□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 77.8 ms