Protein–RNA interactions for Protein: Q62318

Trim28, Transcription intermediary factor 1-beta, mousemouse

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28Q62318 Olfr183-205ENSMUST00000214916 2249 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Trim28Q62318 St18-213ENSMUST00000163727 5604 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Trim28Q62318 Epyc-202ENSMUST00000105285 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Trim28Q62318 Olfr1443-201ENSMUST00000049724 4343 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Trim28Q62318 Gm14172-201ENSMUST00000118255 644 ntBASIC5.87□□□□□ -1.47
Trim28Q62318 Gm12090-201ENSMUST00000118692 758 ntBASIC5.87□□□□□ -1.47
Trim28Q62318 Gm15923-201ENSMUST00000119300 1169 ntBASIC5.87□□□□□ -1.47
Trim28Q62318 Gm15762-201ENSMUST00000126447 333 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Trim28Q62318 Rpl39-ps-201ENSMUST00000142604 355 ntBASIC5.87□□□□□ -1.47
Trim28Q62318 Gm14651-201ENSMUST00000147192 442 ntBASIC5.87□□□□□ -1.47
Trim28Q62318 Gm6619-201ENSMUST00000159229 608 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Trim28Q62318 Gm17131-201ENSMUST00000164420 3846 ntBASIC5.87□□□□□ -1.47
Trim28Q62318 Gm18354-201ENSMUST00000173515 1068 ntBASIC5.87□□□□□ -1.47
Trim28Q62318 Vmn1r-ps45-201ENSMUST00000174106 955 ntBASIC5.87□□□□□ -1.47
Trim28Q62318 Vmn1r-ps24-201ENSMUST00000175772 900 ntBASIC5.87□□□□□ -1.47
Trim28Q62318 Vmn2r-ps10-201ENSMUST00000176836 898 ntBASIC5.87□□□□□ -1.47
Trim28Q62318 Vmn2r-ps8-201ENSMUST00000177088 898 ntBASIC5.87□□□□□ -1.47
Trim28Q62318 Mir3473f-201ENSMUST00000183743 136 ntBASIC5.87□□□□□ -1.47
Trim28Q62318 Gm27636-201ENSMUST00000184528 122 ntBASIC5.87□□□□□ -1.47
Trim28Q62318 Gm29322-201ENSMUST00000185378 582 ntTSL 5 BASIC5.87□□□□□ -1.47
Trim28Q62318 Gm28655-201ENSMUST00000191538 692 ntBASIC5.87□□□□□ -1.47
Trim28Q62318 Gm17953-201ENSMUST00000192061 667 ntBASIC5.87□□□□□ -1.47
Trim28Q62318 Gm43525-201ENSMUST00000196460 616 ntTSL 2 BASIC5.87□□□□□ -1.47
Trim28Q62318 Gm42830-201ENSMUST00000196642 313 ntBASIC5.87□□□□□ -1.47
Trim28Q62318 Gm5876-201ENSMUST00000203735 243 ntBASIC5.87□□□□□ -1.47
Trim28Q62318 Gm43922-201ENSMUST00000205071 328 ntBASIC5.87□□□□□ -1.47
Trim28Q62318 Gm45032-201ENSMUST00000205375 520 ntBASIC5.87□□□□□ -1.47
Trim28Q62318 Gm21885-202ENSMUST00000208510 775 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Trim28Q62318 Gm45269-201ENSMUST00000210359 282 ntBASIC5.87□□□□□ -1.47
Trim28Q62318 Arl2bp-203ENSMUST00000211858 318 ntTSL 5 BASIC5.87□□□□□ -1.47
Trim28Q62318 Mbd3l1-203ENSMUST00000215255 708 ntAPPRIS P1 TSL 3 BASIC5.87□□□□□ -1.47
Trim28Q62318 CT030030.1-201ENSMUST00000218809 152 ntBASIC5.87□□□□□ -1.47
Trim28Q62318 CT030170.6-201ENSMUST00000221149 550 ntTSL 5 BASIC5.87□□□□□ -1.47
Trim28Q62318 AC154816.2-201ENSMUST00000221918 372 ntTSL 5 BASIC5.87□□□□□ -1.47
Trim28Q62318 AC154335.1-201ENSMUST00000224744 395 ntBASIC5.87□□□□□ -1.47
Trim28Q62318 Klra7-201ENSMUST00000032286 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
Trim28Q62318 Sprr3-201ENSMUST00000058142 1222 ntAPPRIS P1 TSL 3 BASIC5.87□□□□□ -1.47
Trim28Q62318 Gm10226-201ENSMUST00000072133 255 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Trim28Q62318 5430401F13Rik-201ENSMUST00000075020 602 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Trim28Q62318 Olfr424-202ENSMUST00000214751 1642 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Trim28Q62318 AC154681.1-201ENSMUST00000225876 1735 ntBASIC5.87□□□□□ -1.47
Trim28Q62318 1700017N19Rik-207ENSMUST00000190708 1945 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Trim28Q62318 Gm34639-201ENSMUST00000222648 2241 ntTSL 5 BASIC5.87□□□□□ -1.47
Trim28Q62318 Ash1l-201ENSMUST00000090933 11268 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Trim28Q62318 Olfr1505-202ENSMUST00000216623 3567 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Trim28Q62318 Epha7-203ENSMUST00000108191 6615 ntAPPRIS ALT1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Trim28Q62318 Pign-201ENSMUST00000070699 6528 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Trim28Q62318 Gm44822-201ENSMUST00000208559 6389 ntBASIC5.86□□□□□ -1.47
Trim28Q62318 Cdk14-203ENSMUST00000115451 5145 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
Trim28Q62318 Dnah14-209ENSMUST00000208001 13696 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Trim28Q62318 Vmn2r26-201ENSMUST00000032238 2568 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Trim28Q62318 Olfr1224-ps1-204ENSMUST00000216833 2294 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Trim28Q62318 Vmn1r31-205ENSMUST00000228586 2115 ntAPPRIS P2 BASIC5.86□□□□□ -1.47
Trim28Q62318 Btbd35f21-201ENSMUST00000105017 1943 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
Trim28Q62318 Btbd35f16-201ENSMUST00000185755 1949 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
Trim28Q62318 Gm43209-201ENSMUST00000198949 1588 ntBASIC5.86□□□□□ -1.47
Trim28Q62318 Gm5127-201ENSMUST00000101296 1455 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Trim28Q62318 Gm26717-201ENSMUST00000181713 1418 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Trim28Q62318 Gm6913-201ENSMUST00000100019 348 ntBASIC5.86□□□□□ -1.47
Trim28Q62318 Mir582-201ENSMUST00000103758 81 ntBASIC5.86□□□□□ -1.47
Trim28Q62318 Snord66-201ENSMUST00000104051 75 ntBASIC5.86□□□□□ -1.47
Trim28Q62318 Gm42606-201ENSMUST00000114209 239 ntBASIC5.86□□□□□ -1.47
Trim28Q62318 Rps11-ps5-201ENSMUST00000117302 472 ntBASIC5.86□□□□□ -1.47
Trim28Q62318 Gm14788-201ENSMUST00000119457 375 ntBASIC5.86□□□□□ -1.47
Trim28Q62318 Gm11904-201ENSMUST00000120562 248 ntBASIC5.86□□□□□ -1.47
Trim28Q62318 Gm15075-201ENSMUST00000122187 477 ntBASIC5.86□□□□□ -1.47
Trim28Q62318 Gm4912-201ENSMUST00000122212 1044 ntBASIC5.86□□□□□ -1.47
Trim28Q62318 Gm9498-201ENSMUST00000140849 291 ntBASIC5.86□□□□□ -1.47
Trim28Q62318 Gm14697-201ENSMUST00000147144 648 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Trim28Q62318 Gm25965-201ENSMUST00000157170 93 ntBASIC5.86□□□□□ -1.47
Trim28Q62318 Vmn1r-ps48-201ENSMUST00000176352 886 ntBASIC5.86□□□□□ -1.47
Trim28Q62318 Gm8221-201ENSMUST00000178052 564 ntBASIC5.86□□□□□ -1.47
Trim28Q62318 Ranbp2-ps8-201ENSMUST00000183723 345 ntBASIC5.86□□□□□ -1.47
Trim28Q62318 1810007C17Rik-201ENSMUST00000187665 710 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Trim28Q62318 Gm4322-201ENSMUST00000191094 336 ntBASIC5.86□□□□□ -1.47
Trim28Q62318 Gm43370-201ENSMUST00000196437 284 ntBASIC5.86□□□□□ -1.47
Trim28Q62318 Gm43151-201ENSMUST00000201093 657 ntTSL 3 BASIC5.86□□□□□ -1.47
Trim28Q62318 Gm8288-201ENSMUST00000223406 593 ntBASIC5.86□□□□□ -1.47
Trim28Q62318 AC115735.3-201ENSMUST00000227757 513 ntBASIC5.86□□□□□ -1.47
Trim28Q62318 Tsx-201ENSMUST00000033691 812 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Trim28Q62318 Olfr1008-201ENSMUST00000054868 942 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
Trim28Q62318 Gm23623-201ENSMUST00000082461 107 ntBASIC5.86□□□□□ -1.47
Trim28Q62318 Gm25739-201ENSMUST00000082886 107 ntBASIC5.86□□□□□ -1.47
Trim28Q62318 Zfy2-202ENSMUST00000187148 2846 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Trim28Q62318 Gabra6-201ENSMUST00000020703 2436 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
Trim28Q62318 Olfr556-202ENSMUST00000213485 3825 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Trim28Q62318 Gm15675-201ENSMUST00000130486 3681 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Trim28Q62318 Pcsk2os2-201ENSMUST00000153878 3370 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Trim28Q62318 Gm37124-201ENSMUST00000192140 1992 ntBASIC5.86□□□□□ -1.47
Trim28Q62318 Olfr1246-204ENSMUST00000217254 5411 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Trim28Q62318 Gm42721-201ENSMUST00000197165 1523 ntBASIC5.85□□□□□ -1.47
Trim28Q62318 Olfr575-202ENSMUST00000213477 3512 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Trim28Q62318 Zfp984-202ENSMUST00000122309 2405 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Trim28Q62318 Gm10330-201ENSMUST00000072014 1354 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Trim28Q62318 Vmn1r34-204ENSMUST00000226999 3048 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Trim28Q62318 Vmn1r185-203ENSMUST00000227264 5589 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Trim28Q62318 Gm23746-201ENSMUST00000104229 125 ntBASIC5.85□□□□□ -1.47
Trim28Q62318 Olfr1073-ps1-201ENSMUST00000117635 381 ntBASIC5.85□□□□□ -1.47
Trim28Q62318 Gm15426-201ENSMUST00000117823 556 ntBASIC5.85□□□□□ -1.47
Trim28Q62318 Gm22453-201ENSMUST00000122801 318 ntBASIC5.85□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 79.9 ms