Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Chl1-201ENSMUST00000066905 7562 ntAPPRIS P2 TSL 1 (best) BASIC3.97□□□□□ -1.77
Six4Q61321 Gm24281-201ENSMUST00000104234 136 ntBASIC3.97□□□□□ -1.77
Six4Q61321 Gm14753-201ENSMUST00000118503 246 ntBASIC3.97□□□□□ -1.77
Six4Q61321 Gm11566-201ENSMUST00000118550 203 ntBASIC3.97□□□□□ -1.77
Six4Q61321 Gm12900-201ENSMUST00000120919 573 ntBASIC3.97□□□□□ -1.77
Six4Q61321 Gm25843-201ENSMUST00000122582 314 ntBASIC3.97□□□□□ -1.77
Six4Q61321 Gm22204-201ENSMUST00000122654 327 ntBASIC3.97□□□□□ -1.77
Six4Q61321 4930406D18Rik-202ENSMUST00000152827 657 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
Six4Q61321 Gm22816-201ENSMUST00000157450 117 ntBASIC3.97□□□□□ -1.77
Six4Q61321 Gm16055-201ENSMUST00000161366 626 ntTSL 2 BASIC3.97□□□□□ -1.77
Six4Q61321 Gm20389-201ENSMUST00000174217 1006 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
Six4Q61321 Gm22120-201ENSMUST00000175590 70 ntBASIC3.97□□□□□ -1.77
Six4Q61321 Gm19898-201ENSMUST00000177490 251 ntBASIC3.97□□□□□ -1.77
Six4Q61321 Gm7497-201ENSMUST00000183064 1003 ntBASIC3.97□□□□□ -1.77
Six4Q61321 Gm29334-201ENSMUST00000190334 357 ntBASIC3.97□□□□□ -1.77
Six4Q61321 Gm28803-201ENSMUST00000190385 764 ntBASIC3.97□□□□□ -1.77
Six4Q61321 5033403H07Rik-203ENSMUST00000198580 467 ntTSL 2 BASIC3.97□□□□□ -1.77
Six4Q61321 Gm10445-201ENSMUST00000203521 762 ntTSL 2 BASIC3.97□□□□□ -1.77
Six4Q61321 Gm45435-201ENSMUST00000211147 475 ntTSL 5 BASIC3.97□□□□□ -1.77
Six4Q61321 AC099612.2-201ENSMUST00000226824 721 ntBASIC3.97□□□□□ -1.77
Six4Q61321 Gm28044-201ENSMUST00000044819 551 ntAPPRIS P1 TSL 3 BASIC3.97□□□□□ -1.77
Six4Q61321 Olfr211-201ENSMUST00000065786 930 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
Six4Q61321 Olfr504-201ENSMUST00000075595 958 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
Six4Q61321 Vmn1r237-201ENSMUST00000077301 950 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
Six4Q61321 Gm22423-201ENSMUST00000082861 184 ntBASIC3.97□□□□□ -1.77
Six4Q61321 Olfr725-201ENSMUST00000089844 1110 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
Six4Q61321 Olfr1061-201ENSMUST00000099889 942 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
Six4Q61321 Gm17067-201ENSMUST00000166837 3673 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
Six4Q61321 Eya4-208ENSMUST00000220299 3615 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
Six4Q61321 Gm38032-201ENSMUST00000195052 1589 ntBASIC3.97□□□□□ -1.77
Six4Q61321 Gm43369-201ENSMUST00000196373 1552 ntBASIC3.97□□□□□ -1.77
Six4Q61321 Nap1l1-202ENSMUST00000171797 3926 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
Six4Q61321 Nap1l1-204ENSMUST00000218828 3934 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
Six4Q61321 Olfr959-202ENSMUST00000215194 4339 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
Six4Q61321 Gm12586-201ENSMUST00000117328 1316 ntBASIC3.96□□□□□ -1.77
Six4Q61321 Olfr788-202ENSMUST00000213222 4747 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.77
Six4Q61321 2310057J18Rik-202ENSMUST00000140558 1445 ntTSL 5 BASIC3.96□□□□□ -1.77
Six4Q61321 Ddi1-201ENSMUST00000051706 7114 ntAPPRIS P1 BASIC3.96□□□□□ -1.77
Six4Q61321 Ifi203-203ENSMUST00000123708 3482 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
Six4Q61321 Jrkl-201ENSMUST00000110582 3223 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
Six4Q61321 Gm36927-201ENSMUST00000192504 1841 ntBASIC3.96□□□□□ -1.78
Six4Q61321 Olfr824-203ENSMUST00000215217 3619 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
Six4Q61321 Olfr616-201ENSMUST00000106886 954 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
Six4Q61321 Gm14299-201ENSMUST00000117586 397 ntBASIC3.96□□□□□ -1.78
Six4Q61321 Gm12387-201ENSMUST00000118573 955 ntBASIC3.96□□□□□ -1.78
Six4Q61321 Gm14229-201ENSMUST00000121178 850 ntBASIC3.96□□□□□ -1.78
Six4Q61321 Gm23633-201ENSMUST00000175293 119 ntBASIC3.96□□□□□ -1.78
Six4Q61321 Fam107b-206ENSMUST00000176254 300 ntTSL 5 BASIC3.96□□□□□ -1.78
Six4Q61321 Gm10067-201ENSMUST00000179462 348 ntBASIC3.96□□□□□ -1.78
Six4Q61321 Gm29320-201ENSMUST00000185235 615 ntBASIC3.96□□□□□ -1.78
Six4Q61321 Gm29179-202ENSMUST00000186138 615 ntBASIC3.96□□□□□ -1.78
Six4Q61321 Gm28598-201ENSMUST00000186490 615 ntBASIC3.96□□□□□ -1.78
Six4Q61321 Gm29448-201ENSMUST00000186675 615 ntBASIC3.96□□□□□ -1.78
Six4Q61321 Gm29314-201ENSMUST00000186800 615 ntBASIC3.96□□□□□ -1.78
Six4Q61321 Gm28253-202ENSMUST00000187971 615 ntBASIC3.96□□□□□ -1.78
Six4Q61321 Gm28702-201ENSMUST00000188276 253 ntTSL 5 BASIC3.96□□□□□ -1.78
Six4Q61321 Gm29268-201ENSMUST00000188669 615 ntBASIC3.96□□□□□ -1.78
Six4Q61321 Gm29169-201ENSMUST00000189835 615 ntBASIC3.96□□□□□ -1.78
Six4Q61321 Gm29218-205ENSMUST00000190846 615 ntBASIC3.96□□□□□ -1.78
Six4Q61321 Gm28978-201ENSMUST00000191120 615 ntBASIC3.96□□□□□ -1.78
Six4Q61321 Gm37172-201ENSMUST00000191926 615 ntBASIC3.96□□□□□ -1.78
Six4Q61321 4930513D17Rik-203ENSMUST00000202800 1159 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Six4Q61321 Gm5885-202ENSMUST00000203357 528 ntBASIC3.96□□□□□ -1.78
Six4Q61321 Znrd1as-204ENSMUST00000209623 1218 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
Six4Q61321 Gm5339-201ENSMUST00000210551 1102 ntBASIC3.96□□□□□ -1.78
Six4Q61321 Gm6991-201ENSMUST00000218475 1178 ntBASIC3.96□□□□□ -1.78
Six4Q61321 AL645546.1-201ENSMUST00000225001 189 ntBASIC3.96□□□□□ -1.78
Six4Q61321 Creg1-201ENSMUST00000040298 425 ntTSL 3 BASIC3.96□□□□□ -1.78
Six4Q61321 Olfr469-201ENSMUST00000075704 945 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
Six4Q61321 Mir30e-201ENSMUST00000083475 92 ntBASIC3.96□□□□□ -1.78
Six4Q61321 Mir504-201ENSMUST00000093602 79 ntBASIC3.96□□□□□ -1.78
Six4Q61321 Olfr1100-201ENSMUST00000094913 969 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
Six4Q61321 Tas2r121-201ENSMUST00000095395 918 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
Six4Q61321 Olfr1355-201ENSMUST00000078414 3317 ntAPPRIS P1 TSL 2 BASIC3.96□□□□□ -1.78
Six4Q61321 Csmd3-201ENSMUST00000100670 13022 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
Six4Q61321 Vmn1r52-207ENSMUST00000228394 3069 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
Six4Q61321 Serpinb9e-201ENSMUST00000071873 1923 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
Six4Q61321 AC167420.1-201ENSMUST00000222999 2121 ntBASIC3.95□□□□□ -1.78
Six4Q61321 Olfr351-202ENSMUST00000213676 3426 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
Six4Q61321 B230334C09Rik-201ENSMUST00000200255 8927 ntBASIC3.95□□□□□ -1.78
Six4Q61321 Olfr1493-ps1-201ENSMUST00000207208 1777 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
Six4Q61321 Gm14325-201ENSMUST00000108939 1576 ntAPPRIS P1 TSL 2 BASIC3.95□□□□□ -1.78
Six4Q61321 Hmgb1-ps5-201ENSMUST00000121058 557 ntBASIC3.95□□□□□ -1.78
Six4Q61321 Gm11349-201ENSMUST00000122209 1116 ntBASIC3.95□□□□□ -1.78
Six4Q61321 Gm14095-201ENSMUST00000134264 516 ntTSL 3 BASIC3.95□□□□□ -1.78
Six4Q61321 Gm20476-201ENSMUST00000172644 492 ntTSL 2 BASIC3.95□□□□□ -1.78
Six4Q61321 Vmn1r-ps143-201ENSMUST00000176730 604 ntBASIC3.95□□□□□ -1.78
Six4Q61321 Gm3424-202ENSMUST00000178418 618 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
Six4Q61321 Gm8246-201ENSMUST00000179411 618 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
Six4Q61321 4930420N18Rik-201ENSMUST00000191831 676 ntBASIC3.95□□□□□ -1.78
Six4Q61321 Gm36954-201ENSMUST00000195362 363 ntBASIC3.95□□□□□ -1.78
Six4Q61321 Gm43559-201ENSMUST00000198755 466 ntBASIC3.95□□□□□ -1.78
Six4Q61321 1700011C11Rik-201ENSMUST00000205268 365 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
Six4Q61321 Zfp950-210ENSMUST00000205854 466 ntTSL 3 BASIC3.95□□□□□ -1.78
Six4Q61321 Gm18944-201ENSMUST00000207672 643 ntBASIC3.95□□□□□ -1.78
Six4Q61321 Gm10988-201ENSMUST00000209150 1088 ntBASIC3.95□□□□□ -1.78
Six4Q61321 Gm45523-201ENSMUST00000210712 799 ntBASIC3.95□□□□□ -1.78
Six4Q61321 CAAA01216754.6-201ENSMUST00000217183 398 ntTSL 5 BASIC3.95□□□□□ -1.78
Six4Q61321 Ccl5-201ENSMUST00000035938 532 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
Six4Q61321 BC023105-201ENSMUST00000073997 1227 ntBASIC3.95□□□□□ -1.78
Retrieved 100 of 76,532 protein–RNA pairs in 73 ms