Protein–RNA interactions for Protein: Q5SNZ0

Ccdc88a, Girdin, mousemouse

Predictions only

Length 1,873 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88aQ5SNZ0 Gt(ROSA)26Sor-204ENSMUST00000167415 551 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Ccdc88aQ5SNZ0 Gm3486-201ENSMUST00000169361 883 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Ccdc88aQ5SNZ0 Fam184a-206ENSMUST00000169866 501 ntTSL 5 BASIC4.45□□□□□ -1.7
Ccdc88aQ5SNZ0 Skint3-202ENSMUST00000170945 3843 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
Ccdc88aQ5SNZ0 Gm20812-201ENSMUST00000179220 684 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
Ccdc88aQ5SNZ0 Obox4-ps1-201ENSMUST00000184446 700 ntBASIC4.45□□□□□ -1.7
Ccdc88aQ5SNZ0 Mir7081-201ENSMUST00000184490 75 ntBASIC4.45□□□□□ -1.7
Ccdc88aQ5SNZ0 Mir6914-201ENSMUST00000184999 69 ntBASIC4.45□□□□□ -1.7
Ccdc88aQ5SNZ0 Gm37473-201ENSMUST00000195079 674 ntTSL 5 BASIC4.45□□□□□ -1.7
Ccdc88aQ5SNZ0 Gm3143-202ENSMUST00000198364 675 ntTSL 2 BASIC4.45□□□□□ -1.7
Ccdc88aQ5SNZ0 Gm44371-201ENSMUST00000204148 467 ntBASIC4.45□□□□□ -1.7
Ccdc88aQ5SNZ0 Gm44773-201ENSMUST00000207374 557 ntBASIC4.45□□□□□ -1.7
Ccdc88aQ5SNZ0 Olfr892-ps1-201ENSMUST00000211998 932 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
Ccdc88aQ5SNZ0 AC093926.1-201ENSMUST00000213730 243 ntBASIC4.45□□□□□ -1.7
Ccdc88aQ5SNZ0 AC122905.1-201ENSMUST00000218181 456 ntTSL 5 BASIC4.45□□□□□ -1.7
Ccdc88aQ5SNZ0 Sprr2i-201ENSMUST00000047264 617 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Ccdc88aQ5SNZ0 Olfr675-201ENSMUST00000073102 942 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
Ccdc88aQ5SNZ0 Olfr677-201ENSMUST00000098161 939 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
Ccdc88aQ5SNZ0 Gm14636-202ENSMUST00000150801 5060 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Ccdc88aQ5SNZ0 Polk-205ENSMUST00000221899 2319 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
Ccdc88aQ5SNZ0 Gm30849-201ENSMUST00000214503 1379 ntTSL 5 BASIC4.45□□□□□ -1.7
Ccdc88aQ5SNZ0 Hhla1-201ENSMUST00000100584 2262 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Ccdc88aQ5SNZ0 Zfp931-202ENSMUST00000108924 962 ntAPPRIS P1 TSL 3 BASIC4.45□□□□□ -1.7
Ccdc88aQ5SNZ0 Gm14399-203ENSMUST00000109059 703 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Ccdc88aQ5SNZ0 Gm14399-205ENSMUST00000109062 626 ntTSL 5 BASIC4.45□□□□□ -1.7
Ccdc88aQ5SNZ0 Gm11448-201ENSMUST00000120427 450 ntBASIC4.45□□□□□ -1.7
Ccdc88aQ5SNZ0 Gm13677-201ENSMUST00000120739 595 ntBASIC4.45□□□□□ -1.7
Ccdc88aQ5SNZ0 Zfp931-204ENSMUST00000131702 704 ntTSL 3 BASIC4.45□□□□□ -1.7
Ccdc88aQ5SNZ0 Gm29044-201ENSMUST00000188916 283 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Ccdc88aQ5SNZ0 Gm28072-202ENSMUST00000190486 352 ntTSL 5 BASIC4.45□□□□□ -1.7
Ccdc88aQ5SNZ0 9430092D12Rik-201ENSMUST00000194937 1274 ntBASIC4.45□□□□□ -1.7
Ccdc88aQ5SNZ0 1700040K01Rik-201ENSMUST00000195145 438 ntBASIC4.45□□□□□ -1.7
Ccdc88aQ5SNZ0 Gm42458-201ENSMUST00000201914 369 ntBASIC4.45□□□□□ -1.7
Ccdc88aQ5SNZ0 Gm19366-201ENSMUST00000206996 156 ntBASIC4.45□□□□□ -1.7
Ccdc88aQ5SNZ0 Olfr125-202ENSMUST00000213857 3835 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Ccdc88aQ5SNZ0 Gm35552-201ENSMUST00000214355 396 ntTSL 5 BASIC4.45□□□□□ -1.7
Ccdc88aQ5SNZ0 AC153979.1-201ENSMUST00000219684 242 ntTSL 5 BASIC4.45□□□□□ -1.7
Ccdc88aQ5SNZ0 AC158981.3-201ENSMUST00000226844 1024 ntBASIC4.45□□□□□ -1.7
Ccdc88aQ5SNZ0 Gm28044-201ENSMUST00000044819 551 ntAPPRIS P1 TSL 3 BASIC4.45□□□□□ -1.7
Ccdc88aQ5SNZ0 Gm24533-201ENSMUST00000083138 196 ntBASIC4.45□□□□□ -1.7
Ccdc88aQ5SNZ0 Olfr826-203ENSMUST00000216661 2858 ntAPPRIS P1 TSL 3 BASIC4.45□□□□□ -1.7
Ccdc88aQ5SNZ0 Olfr1012-203ENSMUST00000214958 3076 ntAPPRIS P1 TSL 3 BASIC4.44□□□□□ -1.7
Ccdc88aQ5SNZ0 Olfr1309-202ENSMUST00000214537 4274 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Ccdc88aQ5SNZ0 Vmn1r14-203ENSMUST00000227574 7394 ntAPPRIS ALT2 BASIC4.44□□□□□ -1.7
Ccdc88aQ5SNZ0 Olfr392-202ENSMUST00000144724 3904 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
Ccdc88aQ5SNZ0 2310057J18Rik-202ENSMUST00000140558 1445 ntTSL 5 BASIC4.44□□□□□ -1.7
Ccdc88aQ5SNZ0 Gm15493-201ENSMUST00000119461 528 ntBASIC4.44□□□□□ -1.7
Ccdc88aQ5SNZ0 Gm11600-201ENSMUST00000119592 240 ntBASIC4.44□□□□□ -1.7
Ccdc88aQ5SNZ0 Gm5726-201ENSMUST00000173886 924 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
Ccdc88aQ5SNZ0 Gm8677-201ENSMUST00000174637 924 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
Ccdc88aQ5SNZ0 Gm20399-201ENSMUST00000174652 132 ntBASIC4.44□□□□□ -1.7
Ccdc88aQ5SNZ0 Gm28591-201ENSMUST00000185259 183 ntBASIC4.44□□□□□ -1.7
Ccdc88aQ5SNZ0 1700011C11Rik-201ENSMUST00000205268 365 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Ccdc88aQ5SNZ0 AC118733.1-201ENSMUST00000217387 1217 ntBASIC4.44□□□□□ -1.7
Ccdc88aQ5SNZ0 Olfr779-202ENSMUST00000222301 929 ntAPPRIS P5 BASIC4.44□□□□□ -1.7
Ccdc88aQ5SNZ0 AC137950.3-201ENSMUST00000228250 246 ntBASIC4.44□□□□□ -1.7
Ccdc88aQ5SNZ0 Olfr988-201ENSMUST00000099928 1076 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
Ccdc88aQ5SNZ0 Xrn1-202ENSMUST00000185633 10256 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
Ccdc88aQ5SNZ0 Zfp260-202ENSMUST00000108200 3604 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Ccdc88aQ5SNZ0 Gm10635-201ENSMUST00000217201 3721 ntTSL 2 BASIC4.44□□□□□ -1.7
Ccdc88aQ5SNZ0 Gm7298-201ENSMUST00000204124 4657 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Ccdc88aQ5SNZ0 Gm597-201ENSMUST00000059937 2887 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Ccdc88aQ5SNZ0 Gm4631-202ENSMUST00000121393 4402 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
Ccdc88aQ5SNZ0 Olfr788-202ENSMUST00000213222 4747 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Ccdc88aQ5SNZ0 Iigp1-202ENSMUST00000066912 2938 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Ccdc88aQ5SNZ0 Olfr1183-203ENSMUST00000219871 8353 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Ccdc88aQ5SNZ0 Gm5590-202ENSMUST00000186976 2315 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Ccdc88aQ5SNZ0 Gm12982-201ENSMUST00000117408 190 ntBASIC4.43□□□□□ -1.7
Ccdc88aQ5SNZ0 Gm22840-201ENSMUST00000158444 136 ntBASIC4.43□□□□□ -1.7
Ccdc88aQ5SNZ0 Gm17060-201ENSMUST00000172394 824 ntBASIC4.43□□□□□ -1.7
Ccdc88aQ5SNZ0 Gm29747-201ENSMUST00000194764 585 ntBASIC4.43□□□□□ -1.7
Ccdc88aQ5SNZ0 Igkv14-126-1-201ENSMUST00000199899 346 ntBASIC4.43□□□□□ -1.7
Ccdc88aQ5SNZ0 Gm20177-201ENSMUST00000203705 334 ntBASIC4.43□□□□□ -1.7
Ccdc88aQ5SNZ0 Gm44674-201ENSMUST00000206159 415 ntTSL 3 BASIC4.43□□□□□ -1.7
Ccdc88aQ5SNZ0 AC152415.1-201ENSMUST00000213320 440 ntBASIC4.43□□□□□ -1.7
Ccdc88aQ5SNZ0 Gm10145-201ENSMUST00000077776 462 ntBASIC4.43□□□□□ -1.7
Ccdc88aQ5SNZ0 Olfr1465-201ENSMUST00000080142 924 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
Ccdc88aQ5SNZ0 Olfr1188-201ENSMUST00000090701 968 ntAPPRIS P2 BASIC4.43□□□□□ -1.7
Ccdc88aQ5SNZ0 Gm13310-201ENSMUST00000120962 1381 ntBASIC4.43□□□□□ -1.7
Ccdc88aQ5SNZ0 Gm15261-201ENSMUST00000136779 2763 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Ccdc88aQ5SNZ0 Dnah7c-204ENSMUST00000189749 12207 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Ccdc88aQ5SNZ0 AC160130.1-201ENSMUST00000220734 2735 ntBASIC4.43□□□□□ -1.7
Ccdc88aQ5SNZ0 Glcci1-206ENSMUST00000162567 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
Ccdc88aQ5SNZ0 Olfr341-202ENSMUST00000213300 6634 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Ccdc88aQ5SNZ0 Gm2030-201ENSMUST00000119590 1129 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Ccdc88aQ5SNZ0 Rpl36a-ps3-201ENSMUST00000120093 321 ntBASIC4.43□□□□□ -1.7
Ccdc88aQ5SNZ0 Gm16064-201ENSMUST00000154997 464 ntTSL 2 BASIC4.43□□□□□ -1.7
Ccdc88aQ5SNZ0 Olfr325-201ENSMUST00000169428 1065 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
Ccdc88aQ5SNZ0 9530097N15Rik-201ENSMUST00000197819 1068 ntBASIC4.43□□□□□ -1.7
Ccdc88aQ5SNZ0 Gm43685-201ENSMUST00000198876 706 ntTSL 3 BASIC4.43□□□□□ -1.7
Ccdc88aQ5SNZ0 Gm42926-201ENSMUST00000200496 697 ntBASIC4.43□□□□□ -1.7
Ccdc88aQ5SNZ0 Serpinb3c-201ENSMUST00000027565 1659 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Ccdc88aQ5SNZ0 Vmn2r-ps42-201ENSMUST00000174123 2083 ntBASIC4.42□□□□□ -1.7
Ccdc88aQ5SNZ0 Olfr536-205ENSMUST00000215768 4231 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Ccdc88aQ5SNZ0 Olfr1058-202ENSMUST00000213998 1710 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Ccdc88aQ5SNZ0 Iigp1-201ENSMUST00000032473 3121 ntAPPRIS P1 TSL 3 BASIC4.42□□□□□ -1.7
Ccdc88aQ5SNZ0 AC154548.1-201ENSMUST00000225844 3838 ntBASIC4.42□□□□□ -1.7
Ccdc88aQ5SNZ0 Gm43010-201ENSMUST00000195993 2878 ntBASIC4.42□□□□□ -1.7
Ccdc88aQ5SNZ0 Slco1a5-201ENSMUST00000081380 2572 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Ccdc88aQ5SNZ0 Olfr350-203ENSMUST00000215100 2086 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 93.5 ms