Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 AC130661.1-201ENSMUST00000218248 1680 ntBASIC10.15□□□□□ -0.79
Trim41Q5NCC3 Gm38105-201ENSMUST00000192112 2621 ntBASIC10.15□□□□□ -0.79
Trim41Q5NCC3 Gm16579-201ENSMUST00000161985 2566 ntTSL 1 (best) BASIC10.15□□□□□ -0.79
Trim41Q5NCC3 Vmn2r-ps21-201ENSMUST00000177115 2947 ntBASIC10.14□□□□□ -0.79
Trim41Q5NCC3 B530045E10Rik-202ENSMUST00000189035 3138 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Trim41Q5NCC3 Gm2016-201ENSMUST00000110147 1766 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trim41Q5NCC3 Gm14988-201ENSMUST00000117224 1548 ntBASIC10.14□□□□□ -0.79
Trim41Q5NCC3 Nsd2-205ENSMUST00000114399 7786 ntTSL 5 BASIC10.14□□□□□ -0.79
Trim41Q5NCC3 Gm26743-201ENSMUST00000180913 1726 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Trim41Q5NCC3 Olfr1085-202ENSMUST00000213279 5191 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
Trim41Q5NCC3 1700007M16Rik-201ENSMUST00000129075 435 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Trim41Q5NCC3 Gm16117-201ENSMUST00000160544 324 ntTSL 5 BASIC10.14□□□□□ -0.79
Trim41Q5NCC3 Vmn2r-ps6-201ENSMUST00000176317 1101 ntBASIC10.14□□□□□ -0.79
Trim41Q5NCC3 Gm25194-201ENSMUST00000177987 79 ntBASIC10.14□□□□□ -0.79
Trim41Q5NCC3 Gm42776-201ENSMUST00000198031 406 ntBASIC10.14□□□□□ -0.79
Trim41Q5NCC3 Gm43441-201ENSMUST00000201458 205 ntBASIC10.14□□□□□ -0.79
Trim41Q5NCC3 Gm44059-201ENSMUST00000204048 351 ntBASIC10.14□□□□□ -0.79
Trim41Q5NCC3 Olfr27-202ENSMUST00000216405 1125 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
Trim41Q5NCC3 Sprr2f-201ENSMUST00000050397 609 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trim41Q5NCC3 Gm23514-201ENSMUST00000082827 130 ntBASIC10.14□□□□□ -0.79
Trim41Q5NCC3 Snord15b-201ENSMUST00000083032 145 ntBASIC10.14□□□□□ -0.79
Trim41Q5NCC3 Gm23451-201ENSMUST00000083328 122 ntBASIC10.14□□□□□ -0.79
Trim41Q5NCC3 Xlr5c-201ENSMUST00000088450 540 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Trim41Q5NCC3 Adipor2-201ENSMUST00000032272 4184 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trim41Q5NCC3 Zfp974-201ENSMUST00000098639 5158 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trim41Q5NCC3 Celf1-207ENSMUST00000111452 7800 ntAPPRIS P4 TSL 5 BASIC10.14□□□□□ -0.79
Trim41Q5NCC3 Gm26733-201ENSMUST00000180846 2046 ntTSL 5 BASIC10.14□□□□□ -0.79
Trim41Q5NCC3 Gm16270-201ENSMUST00000160327 3238 ntBASIC10.14□□□□□ -0.79
Trim41Q5NCC3 AC121960.2-201ENSMUST00000227349 3446 ntBASIC10.14□□□□□ -0.79
Trim41Q5NCC3 Abcc9-201ENSMUST00000073173 7433 ntAPPRIS ALT2 TSL 5 BASIC10.14□□□□□ -0.79
Trim41Q5NCC3 Olfr1420-203ENSMUST00000217281 2998 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
Trim41Q5NCC3 Aadacl2-201ENSMUST00000169794 1590 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trim41Q5NCC3 Enpp2-204ENSMUST00000173516 2887 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Trim41Q5NCC3 Bclaf1-202ENSMUST00000092678 5307 ntAPPRIS P3 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trim41Q5NCC3 Gm14391-204ENSMUST00000109058 1854 ntAPPRIS P1 TSL 3 BASIC10.13□□□□□ -0.79
Trim41Q5NCC3 Vmn1r27-203ENSMUST00000228530 3115 ntAPPRIS P2 BASIC10.13□□□□□ -0.79
Trim41Q5NCC3 Gm12245-201ENSMUST00000117266 357 ntBASIC10.13□□□□□ -0.79
Trim41Q5NCC3 Gm15490-201ENSMUST00000119894 387 ntBASIC10.13□□□□□ -0.79
Trim41Q5NCC3 Gm7846-201ENSMUST00000145844 274 ntBASIC10.13□□□□□ -0.79
Trim41Q5NCC3 Gm25962-201ENSMUST00000157173 168 ntBASIC10.13□□□□□ -0.79
Trim41Q5NCC3 Gm25341-201ENSMUST00000157461 268 ntBASIC10.13□□□□□ -0.79
Trim41Q5NCC3 Gm10772-201ENSMUST00000167981 255 ntAPPRIS P1 BASIC10.13□□□□□ -0.79
Trim41Q5NCC3 Gm36999-201ENSMUST00000192756 1046 ntBASIC10.13□□□□□ -0.79
Trim41Q5NCC3 Igkv3-12-1-201ENSMUST00000197093 351 ntBASIC10.13□□□□□ -0.79
Trim41Q5NCC3 Gm35371-201ENSMUST00000216204 579 ntTSL 5 BASIC10.13□□□□□ -0.79
Trim41Q5NCC3 CAAA01216754.6-201ENSMUST00000217183 398 ntTSL 5 BASIC10.13□□□□□ -0.79
Trim41Q5NCC3 AC132315.1-201ENSMUST00000221771 390 ntBASIC10.13□□□□□ -0.79
Trim41Q5NCC3 AC154576.2-202ENSMUST00000223916 688 ntBASIC10.13□□□□□ -0.79
Trim41Q5NCC3 AC129219.1-201ENSMUST00000224336 448 ntBASIC10.13□□□□□ -0.79
Trim41Q5NCC3 Cox6b2-201ENSMUST00000063324 553 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trim41Q5NCC3 Gm8402-201ENSMUST00000118183 1770 ntBASIC10.13□□□□□ -0.79
Trim41Q5NCC3 Gm8383-201ENSMUST00000121179 1770 ntBASIC10.13□□□□□ -0.79
Trim41Q5NCC3 Sspo-206ENSMUST00000212740 15408 ntAPPRIS ALT2 TSL 5 BASIC10.13□□□□□ -0.79
Trim41Q5NCC3 Srgap1-201ENSMUST00000020322 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trim41Q5NCC3 Gm38032-201ENSMUST00000195052 1589 ntBASIC10.13□□□□□ -0.79
Trim41Q5NCC3 AC154576.1-202ENSMUST00000223966 3320 ntBASIC10.13□□□□□ -0.79
Trim41Q5NCC3 Gm7451-201ENSMUST00000208382 1392 ntBASIC10.13□□□□□ -0.79
Trim41Q5NCC3 CT009696.4-202ENSMUST00000213560 2248 ntTSL 5 BASIC10.13□□□□□ -0.79
Trim41Q5NCC3 Shroom4-201ENSMUST00000089520 8201 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Trim41Q5NCC3 Pkd1l3-202ENSMUST00000109242 6606 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trim41Q5NCC3 Unc13c-202ENSMUST00000184666 8796 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
Trim41Q5NCC3 Lig4-202ENSMUST00000170033 3105 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trim41Q5NCC3 Mlh3-203ENSMUST00000220854 4699 ntAPPRIS ALT2 TSL 5 BASIC10.12□□□□□ -0.79
Trim41Q5NCC3 Gm23691-201ENSMUST00000101878 107 ntBASIC10.12□□□□□ -0.79
Trim41Q5NCC3 Gm15177-201ENSMUST00000120491 577 ntBASIC10.12□□□□□ -0.79
Trim41Q5NCC3 Mir7685-201ENSMUST00000183555 62 ntBASIC10.12□□□□□ -0.79
Trim41Q5NCC3 Gm28610-201ENSMUST00000187716 406 ntTSL 2 BASIC10.12□□□□□ -0.79
Trim41Q5NCC3 D030025E07Rik-205ENSMUST00000198478 418 ntTSL 3 BASIC10.12□□□□□ -0.79
Trim41Q5NCC3 Gm43142-201ENSMUST00000198670 361 ntBASIC10.12□□□□□ -0.79
Trim41Q5NCC3 Gm32754-201ENSMUST00000199442 257 ntTSL 5 BASIC10.12□□□□□ -0.79
Trim41Q5NCC3 Gm44063-201ENSMUST00000203307 376 ntBASIC10.12□□□□□ -0.79
Trim41Q5NCC3 Gm43919-201ENSMUST00000204303 364 ntBASIC10.12□□□□□ -0.79
Trim41Q5NCC3 Gm29754-201ENSMUST00000206269 358 ntBASIC10.12□□□□□ -0.79
Trim41Q5NCC3 Gm18252-202ENSMUST00000214886 409 ntTSL 5 BASIC10.12□□□□□ -0.79
Trim41Q5NCC3 AC121599.1-201ENSMUST00000224276 449 ntBASIC10.12□□□□□ -0.79
Trim41Q5NCC3 AC154738.4-201ENSMUST00000228310 414 ntBASIC10.12□□□□□ -0.79
Trim41Q5NCC3 Gm25853-201ENSMUST00000082793 132 ntBASIC10.12□□□□□ -0.79
Trim41Q5NCC3 Gm17473-201ENSMUST00000180585 2216 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Trim41Q5NCC3 Elavl4-201ENSMUST00000102722 4107 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trim41Q5NCC3 Elavl4-203ENSMUST00000106597 4149 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Trim41Q5NCC3 Phkb-201ENSMUST00000053771 5351 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trim41Q5NCC3 Celf2-202ENSMUST00000100429 7491 ntAPPRIS P3 TSL 5 BASIC10.12□□□□□ -0.79
Trim41Q5NCC3 Ifi204-201ENSMUST00000111214 2296 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
Trim41Q5NCC3 Cyp4a12a-201ENSMUST00000084343 2422 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trim41Q5NCC3 Gm43201-201ENSMUST00000195925 3416 ntBASIC10.11□□□□□ -0.79
Trim41Q5NCC3 Serpina3b-201ENSMUST00000085052 2070 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trim41Q5NCC3 Olfr508-201ENSMUST00000072914 1635 ntAPPRIS P1 BASIC10.11□□□□□ -0.79
Trim41Q5NCC3 Fbxw16-201ENSMUST00000084984 1497 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trim41Q5NCC3 Adgrf5-201ENSMUST00000113599 8535 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
Trim41Q5NCC3 Gm5891-202ENSMUST00000186212 2495 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trim41Q5NCC3 Gm10662-202ENSMUST00000186928 2495 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trim41Q5NCC3 Vmn1r220-204ENSMUST00000227950 6238 ntAPPRIS P1 BASIC10.11□□□□□ -0.79
Trim41Q5NCC3 Zgrf1-201ENSMUST00000043108 7046 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
Trim41Q5NCC3 Olfr1242-204ENSMUST00000216001 2569 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
Trim41Q5NCC3 Gm16092-201ENSMUST00000161449 2405 ntTSL 5 BASIC10.11□□□□□ -0.79
Trim41Q5NCC3 Gm13378-201ENSMUST00000117483 336 ntBASIC10.11□□□□□ -0.79
Trim41Q5NCC3 Psmb6-ps-201ENSMUST00000117520 713 ntBASIC10.11□□□□□ -0.79
Trim41Q5NCC3 Gm15382-201ENSMUST00000118011 537 ntBASIC10.11□□□□□ -0.79
Trim41Q5NCC3 Gm12512-201ENSMUST00000119620 217 ntBASIC10.11□□□□□ -0.79
Trim41Q5NCC3 Gm14037-201ENSMUST00000120576 313 ntBASIC10.11□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 88.6 ms