Protein–RNA interactions for Protein: Q4QRL3

Ccdc88b, Coiled-coil domain-containing protein 88B, mousemouse

Predictions only

Length 1,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88bQ4QRL3 Rgs21-202ENSMUST00000184189 1674 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Ccdc88bQ4QRL3 Trhr-202ENSMUST00000110289 1745 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
Ccdc88bQ4QRL3 Olfr1130-201ENSMUST00000213103 2643 ntAPPRIS P1 TSL 3 BASIC6.18□□□□□ -1.42
Ccdc88bQ4QRL3 Olfr102-202ENSMUST00000217590 2783 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Ccdc88bQ4QRL3 Gm43883-201ENSMUST00000204002 3750 ntBASIC6.18□□□□□ -1.42
Ccdc88bQ4QRL3 Zfp120-201ENSMUST00000089207 4127 ntAPPRIS P2 TSL 1 (best) BASIC6.18□□□□□ -1.42
Ccdc88bQ4QRL3 Frmpd3-201ENSMUST00000044702 3141 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Ccdc88bQ4QRL3 Olfr1093-203ENSMUST00000219561 2124 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Ccdc88bQ4QRL3 Olfr365-202ENSMUST00000213969 5333 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Ccdc88bQ4QRL3 Gm12683-201ENSMUST00000117528 415 ntBASIC6.18□□□□□ -1.42
Ccdc88bQ4QRL3 Gm15780-201ENSMUST00000121283 935 ntBASIC6.18□□□□□ -1.42
Ccdc88bQ4QRL3 D830030K20Rik-202ENSMUST00000178670 441 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Ccdc88bQ4QRL3 Gm28269-201ENSMUST00000189511 559 ntAPPRIS P1 TSL 3 BASIC6.18□□□□□ -1.42
Ccdc88bQ4QRL3 Ube2l3-ps1-201ENSMUST00000199777 436 ntBASIC6.18□□□□□ -1.42
Ccdc88bQ4QRL3 Gm42723-202ENSMUST00000200561 1254 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Ccdc88bQ4QRL3 Gm44200-201ENSMUST00000204883 662 ntTSL 5 BASIC6.18□□□□□ -1.42
Ccdc88bQ4QRL3 Olfr1244-ps1-201ENSMUST00000213226 683 ntBASIC6.18□□□□□ -1.42
Ccdc88bQ4QRL3 Gm33424-201ENSMUST00000222317 257 ntTSL 5 BASIC6.18□□□□□ -1.42
Ccdc88bQ4QRL3 AC158981.3-201ENSMUST00000226844 1024 ntBASIC6.18□□□□□ -1.42
Ccdc88bQ4QRL3 Spink1-201ENSMUST00000025381 422 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Ccdc88bQ4QRL3 Sult6b1-201ENSMUST00000042683 839 ntTSL 5 BASIC6.18□□□□□ -1.42
Ccdc88bQ4QRL3 Olfr308-201ENSMUST00000044256 1056 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Ccdc88bQ4QRL3 Olfr1446-201ENSMUST00000081236 1044 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Ccdc88bQ4QRL3 Ttn-202ENSMUST00000099980 16891 ntTSL 5 BASIC6.18□□□□□ -1.42
Ccdc88bQ4QRL3 Olfr1120-202ENSMUST00000215163 4404 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
Ccdc88bQ4QRL3 Gm14326-204ENSMUST00000178829 1665 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Ccdc88bQ4QRL3 Sbno1-201ENSMUST00000065263 10071 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Ccdc88bQ4QRL3 Jrkl-201ENSMUST00000110582 3223 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Ccdc88bQ4QRL3 Olfr220-202ENSMUST00000194229 3286 ntAPPRIS P1 TSL 3 BASIC6.18□□□□□ -1.42
Ccdc88bQ4QRL3 Prkdc-201ENSMUST00000023352 12647 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Ccdc88bQ4QRL3 Gm26088-201ENSMUST00000157896 131 ntBASIC6.17□□□□□ -1.42
Ccdc88bQ4QRL3 Vmn2r-ps36-201ENSMUST00000172589 2562 ntBASIC6.17□□□□□ -1.42
Ccdc88bQ4QRL3 Gm9947-202ENSMUST00000187401 687 ntTSL 5 BASIC6.17□□□□□ -1.42
Ccdc88bQ4QRL3 Gm6445-201ENSMUST00000189515 1112 ntBASIC6.17□□□□□ -1.42
Ccdc88bQ4QRL3 Gm13266-203ENSMUST00000193364 421 ntTSL 3 BASIC6.17□□□□□ -1.42
Ccdc88bQ4QRL3 Gm17966-201ENSMUST00000193453 594 ntBASIC6.17□□□□□ -1.42
Ccdc88bQ4QRL3 Gm38375-201ENSMUST00000194610 2227 ntBASIC6.17□□□□□ -1.42
Ccdc88bQ4QRL3 4930558F17Rik-201ENSMUST00000197789 786 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Ccdc88bQ4QRL3 Gm43640-201ENSMUST00000199000 786 ntTSL 5 BASIC6.17□□□□□ -1.42
Ccdc88bQ4QRL3 Gm33847-201ENSMUST00000199294 786 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Ccdc88bQ4QRL3 Gm43492-201ENSMUST00000199522 786 ntTSL 5 BASIC6.17□□□□□ -1.42
Ccdc88bQ4QRL3 Gm6303-201ENSMUST00000210123 471 ntBASIC6.17□□□□□ -1.42
Ccdc88bQ4QRL3 Olfr341-202ENSMUST00000213300 6634 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Ccdc88bQ4QRL3 Olfr142-202ENSMUST00000213968 3630 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Ccdc88bQ4QRL3 A530021J07Rik-201ENSMUST00000066005 414 ntTSL 3 BASIC6.17□□□□□ -1.42
Ccdc88bQ4QRL3 Gm25205-201ENSMUST00000082841 103 ntBASIC6.17□□□□□ -1.42
Ccdc88bQ4QRL3 Psg25-201ENSMUST00000094795 3109 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Ccdc88bQ4QRL3 Vdac3-ps1-201ENSMUST00000099736 853 ntBASIC6.17□□□□□ -1.42
Ccdc88bQ4QRL3 Olfr709-ps1-202ENSMUST00000215468 5078 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Ccdc88bQ4QRL3 Adgrg2-203ENSMUST00000112401 4632 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
Ccdc88bQ4QRL3 Cp-205ENSMUST00000108329 4564 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
Ccdc88bQ4QRL3 Olfr390-202ENSMUST00000120081 3604 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
Ccdc88bQ4QRL3 Tenm1-202ENSMUST00000115058 12837 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
Ccdc88bQ4QRL3 Gm11408-201ENSMUST00000117889 519 ntBASIC6.16□□□□□ -1.42
Ccdc88bQ4QRL3 Klrd1-203ENSMUST00000119520 919 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
Ccdc88bQ4QRL3 Gm25835-201ENSMUST00000158917 144 ntBASIC6.16□□□□□ -1.42
Ccdc88bQ4QRL3 Gm45157-201ENSMUST00000208729 401 ntBASIC6.16□□□□□ -1.42
Ccdc88bQ4QRL3 Olfr1029-201ENSMUST00000082191 1061 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Ccdc88bQ4QRL3 Olfr877-201ENSMUST00000086063 936 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Ccdc88bQ4QRL3 Olfr618-201ENSMUST00000098197 957 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Ccdc88bQ4QRL3 Gm14636-202ENSMUST00000150801 5060 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Ccdc88bQ4QRL3 Olfr476-202ENSMUST00000217173 2539 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Ccdc88bQ4QRL3 Gm42492-201ENSMUST00000195780 2915 ntBASIC6.16□□□□□ -1.42
Ccdc88bQ4QRL3 Vmn2r78-201ENSMUST00000170835 2611 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Ccdc88bQ4QRL3 Gm14975-201ENSMUST00000118741 664 ntBASIC6.15□□□□□ -1.42
Ccdc88bQ4QRL3 Vmn1r-ps132-201ENSMUST00000120434 892 ntBASIC6.15□□□□□ -1.42
Ccdc88bQ4QRL3 Gm43491-201ENSMUST00000197133 784 ntBASIC6.15□□□□□ -1.42
Ccdc88bQ4QRL3 Gm36776-201ENSMUST00000207006 203 ntBASIC6.15□□□□□ -1.42
Ccdc88bQ4QRL3 AC153971.2-201ENSMUST00000214553 777 ntBASIC6.15□□□□□ -1.42
Ccdc88bQ4QRL3 4930469B13Rik-202ENSMUST00000224808 348 ntBASIC6.15□□□□□ -1.42
Ccdc88bQ4QRL3 Olfr1099-201ENSMUST00000099871 1031 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
Ccdc88bQ4QRL3 4932431L22Rik-201ENSMUST00000193456 3140 ntBASIC6.15□□□□□ -1.42
Ccdc88bQ4QRL3 B020011L13Rik-201ENSMUST00000188801 2879 ntAPPRIS P1 TSL 3 BASIC6.15□□□□□ -1.42
Ccdc88bQ4QRL3 Gm37862-201ENSMUST00000193079 2533 ntBASIC6.15□□□□□ -1.42
Ccdc88bQ4QRL3 Vmn1r196-204ENSMUST00000228382 6525 ntAPPRIS P2 BASIC6.15□□□□□ -1.42
Ccdc88bQ4QRL3 Matr3-ps2-201ENSMUST00000160839 1996 ntBASIC6.15□□□□□ -1.42
Ccdc88bQ4QRL3 Vmn1r39-207ENSMUST00000228862 2398 ntAPPRIS P2 BASIC6.15□□□□□ -1.43
Ccdc88bQ4QRL3 Gm44800-201ENSMUST00000207510 1855 ntBASIC6.15□□□□□ -1.43
Ccdc88bQ4QRL3 AC124586.1-201ENSMUST00000221673 2795 ntBASIC6.15□□□□□ -1.43
Ccdc88bQ4QRL3 Vmn2r19-201ENSMUST00000073948 2565 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
Ccdc88bQ4QRL3 Trav7n-4-201ENSMUST00000103609 341 ntAPPRIS P1 BASIC6.15□□□□□ -1.43
Ccdc88bQ4QRL3 Gm13650-201ENSMUST00000117729 433 ntBASIC6.15□□□□□ -1.43
Ccdc88bQ4QRL3 Gm22310-201ENSMUST00000157509 116 ntBASIC6.15□□□□□ -1.43
Ccdc88bQ4QRL3 Gm26141-201ENSMUST00000175299 126 ntBASIC6.15□□□□□ -1.43
Ccdc88bQ4QRL3 Gm28591-201ENSMUST00000185259 183 ntBASIC6.15□□□□□ -1.43
Ccdc88bQ4QRL3 Gm28660-201ENSMUST00000186496 253 ntBASIC6.15□□□□□ -1.43
Ccdc88bQ4QRL3 AC133101.1-201ENSMUST00000226939 1199 ntBASIC6.15□□□□□ -1.43
Ccdc88bQ4QRL3 Olfr744-201ENSMUST00000066457 1105 ntAPPRIS P1 BASIC6.15□□□□□ -1.43
Ccdc88bQ4QRL3 Olfr273-202ENSMUST00000107670 4796 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Ccdc88bQ4QRL3 Gm5946-202ENSMUST00000182652 2724 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Ccdc88bQ4QRL3 AC154386.1-201ENSMUST00000222753 2871 ntBASIC6.14□□□□□ -1.43
Ccdc88bQ4QRL3 Olfr787-202ENSMUST00000213329 4958 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Ccdc88bQ4QRL3 Olfr837-202ENSMUST00000215699 3758 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Ccdc88bQ4QRL3 Klrc2-203ENSMUST00000118401 707 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
Ccdc88bQ4QRL3 Gm14463-201ENSMUST00000121117 498 ntBASIC6.14□□□□□ -1.43
Ccdc88bQ4QRL3 Gm23753-201ENSMUST00000157575 149 ntBASIC6.14□□□□□ -1.43
Ccdc88bQ4QRL3 Gm16303-201ENSMUST00000161498 390 ntBASIC6.14□□□□□ -1.43
Ccdc88bQ4QRL3 Gm17103-201ENSMUST00000168897 549 ntTSL 3 BASIC6.14□□□□□ -1.43
Ccdc88bQ4QRL3 Trav14n-1-201ENSMUST00000177578 340 ntAPPRIS ALT2 BASIC6.14□□□□□ -1.43
Ccdc88bQ4QRL3 Gm21827-201ENSMUST00000178247 423 ntBASIC6.14□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 78.5 ms