Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Sult2a4-202ENSMUST00000165167 964 ntAPPRIS P2 TSL 5 BASIC4.19□□□□□ -1.74
Upf3bQ3ULL6 Vmn2r-ps85-201ENSMUST00000174022 940 ntBASIC4.19□□□□□ -1.74
Upf3bQ3ULL6 Gm26219-201ENSMUST00000175216 71 ntBASIC4.19□□□□□ -1.74
Upf3bQ3ULL6 Gm19898-201ENSMUST00000177490 251 ntBASIC4.19□□□□□ -1.74
Upf3bQ3ULL6 Ap3m1-ps-201ENSMUST00000177652 1258 ntBASIC4.19□□□□□ -1.74
Upf3bQ3ULL6 Gm21045-201ENSMUST00000183058 1020 ntBASIC4.19□□□□□ -1.74
Upf3bQ3ULL6 Gm27828-201ENSMUST00000184108 119 ntBASIC4.19□□□□□ -1.74
Upf3bQ3ULL6 Mir6933-201ENSMUST00000184982 81 ntBASIC4.19□□□□□ -1.74
Upf3bQ3ULL6 Gm28702-201ENSMUST00000188276 253 ntTSL 5 BASIC4.19□□□□□ -1.74
Upf3bQ3ULL6 1700024B18Rik-201ENSMUST00000190088 423 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Upf3bQ3ULL6 Obox4-ps24-201ENSMUST00000197686 540 ntBASIC4.19□□□□□ -1.74
Upf3bQ3ULL6 5033403H07Rik-203ENSMUST00000198580 467 ntTSL 2 BASIC4.19□□□□□ -1.74
Upf3bQ3ULL6 Gm32772-201ENSMUST00000205898 594 ntTSL 3 BASIC4.19□□□□□ -1.74
Upf3bQ3ULL6 Gm10988-201ENSMUST00000209150 1088 ntBASIC4.19□□□□□ -1.74
Upf3bQ3ULL6 Gm30034-201ENSMUST00000219589 248 ntTSL 5 BASIC4.19□□□□□ -1.74
Upf3bQ3ULL6 AC123705.4-201ENSMUST00000222411 493 ntTSL 3 BASIC4.19□□□□□ -1.74
Upf3bQ3ULL6 AC156559.1-201ENSMUST00000224158 222 ntBASIC4.19□□□□□ -1.74
Upf3bQ3ULL6 Olfr211-201ENSMUST00000065786 930 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
Upf3bQ3ULL6 Olfr725-201ENSMUST00000089844 1110 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
Upf3bQ3ULL6 Mmrn1-203ENSMUST00000204333 4472 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
Upf3bQ3ULL6 Gm6367-201ENSMUST00000178646 2464 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Upf3bQ3ULL6 9430025C20Rik-201ENSMUST00000068663 2115 ntBASIC4.19□□□□□ -1.74
Upf3bQ3ULL6 Csmd3-201ENSMUST00000100670 13022 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Upf3bQ3ULL6 Spata31d1c-201ENSMUST00000099427 3390 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Upf3bQ3ULL6 Usp34-208ENSMUST00000180046 12200 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Upf3bQ3ULL6 Cd200r3-209ENSMUST00000166731 3876 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
Upf3bQ3ULL6 1700017N19Rik-210ENSMUST00000218464 1597 ntTSL 5 BASIC4.19□□□□□ -1.74
Upf3bQ3ULL6 AC153150.1-201ENSMUST00000226065 3782 ntBASIC4.18□□□□□ -1.74
Upf3bQ3ULL6 Mga-204ENSMUST00000110774 13931 ntAPPRIS P3 TSL 5 BASIC4.18□□□□□ -1.74
Upf3bQ3ULL6 Mgat4e-202ENSMUST00000172898 1735 ntAPPRIS P1 TSL 2 BASIC4.18□□□□□ -1.74
Upf3bQ3ULL6 Gm7195-201ENSMUST00000190869 1707 ntBASIC4.18□□□□□ -1.74
Upf3bQ3ULL6 Skint4-201ENSMUST00000069769 3367 ntAPPRIS ALT2 TSL 2 BASIC4.18□□□□□ -1.74
Upf3bQ3ULL6 Pak3-201ENSMUST00000033640 8348 ntAPPRIS ALT1 TSL 1 (best) BASIC4.18□□□□□ -1.74
Upf3bQ3ULL6 Gm5757-201ENSMUST00000117494 528 ntBASIC4.18□□□□□ -1.74
Upf3bQ3ULL6 Gm14885-201ENSMUST00000117969 496 ntBASIC4.18□□□□□ -1.74
Upf3bQ3ULL6 Gm14605-201ENSMUST00000120599 268 ntBASIC4.18□□□□□ -1.74
Upf3bQ3ULL6 Gm11403-201ENSMUST00000122195 369 ntBASIC4.18□□□□□ -1.74
Upf3bQ3ULL6 AI847159-202ENSMUST00000138431 952 ntTSL 2 BASIC4.18□□□□□ -1.74
Upf3bQ3ULL6 1700003G18Rik-202ENSMUST00000150518 312 ntTSL 3 BASIC4.18□□□□□ -1.74
Upf3bQ3ULL6 Gm26355-201ENSMUST00000158220 105 ntBASIC4.18□□□□□ -1.74
Upf3bQ3ULL6 Gm16055-201ENSMUST00000161366 626 ntTSL 2 BASIC4.18□□□□□ -1.74
Upf3bQ3ULL6 Vmn2r-ps122-201ENSMUST00000176687 906 ntBASIC4.18□□□□□ -1.74
Upf3bQ3ULL6 Gm7497-201ENSMUST00000183064 1003 ntBASIC4.18□□□□□ -1.74
Upf3bQ3ULL6 Gm8296-201ENSMUST00000185597 524 ntBASIC4.18□□□□□ -1.74
Upf3bQ3ULL6 1700109I08Rik-201ENSMUST00000185680 396 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Upf3bQ3ULL6 Gm29405-201ENSMUST00000187204 370 ntTSL 5 BASIC4.18□□□□□ -1.74
Upf3bQ3ULL6 Gm29557-201ENSMUST00000188245 370 ntTSL 5 BASIC4.18□□□□□ -1.74
Upf3bQ3ULL6 Gm29334-201ENSMUST00000190334 357 ntBASIC4.18□□□□□ -1.74
Upf3bQ3ULL6 Gm28174-201ENSMUST00000191003 370 ntTSL 5 BASIC4.18□□□□□ -1.74
Upf3bQ3ULL6 Gm28267-201ENSMUST00000191093 265 ntBASIC4.18□□□□□ -1.74
Upf3bQ3ULL6 Ociad2-206ENSMUST00000202012 876 ntTSL 5 BASIC4.18□□□□□ -1.74
Upf3bQ3ULL6 Gm44521-201ENSMUST00000206469 217 ntBASIC4.18□□□□□ -1.74
Upf3bQ3ULL6 Gm44995-201ENSMUST00000207056 504 ntTSL 3 BASIC4.18□□□□□ -1.74
Upf3bQ3ULL6 AC156504.1-201ENSMUST00000214608 157 ntBASIC4.18□□□□□ -1.74
Upf3bQ3ULL6 Gm18016-201ENSMUST00000216119 801 ntBASIC4.18□□□□□ -1.74
Upf3bQ3ULL6 AC153912.1-201ENSMUST00000217011 724 ntAPPRIS P1 TSL 3 BASIC4.18□□□□□ -1.74
Upf3bQ3ULL6 5430402E10Rik-201ENSMUST00000063127 798 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
Upf3bQ3ULL6 Gm25481-201ENSMUST00000083221 158 ntBASIC4.18□□□□□ -1.74
Upf3bQ3ULL6 Svs2-201ENSMUST00000044953 1695 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
Upf3bQ3ULL6 4921515E04Rik-203ENSMUST00000227364 2309 ntBASIC4.18□□□□□ -1.74
Upf3bQ3ULL6 Gm13058-201ENSMUST00000117097 1435 ntBASIC4.18□□□□□ -1.74
Upf3bQ3ULL6 AC167420.1-201ENSMUST00000222999 2121 ntBASIC4.18□□□□□ -1.74
Upf3bQ3ULL6 Vmn1r52-207ENSMUST00000228394 3069 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
Upf3bQ3ULL6 Gpr34-202ENSMUST00000096492 1898 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
Upf3bQ3ULL6 Vmn2r-ps45-201ENSMUST00000174138 2435 ntBASIC4.17□□□□□ -1.74
Upf3bQ3ULL6 Vmn1r52-205ENSMUST00000227893 3108 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
Upf3bQ3ULL6 C230031I18Rik-201ENSMUST00000197856 3698 ntBASIC4.17□□□□□ -1.74
Upf3bQ3ULL6 Arhgap12-205ENSMUST00000182066 4506 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
Upf3bQ3ULL6 Gm36951-201ENSMUST00000193840 2687 ntBASIC4.17□□□□□ -1.74
Upf3bQ3ULL6 4933400A11Rik-203ENSMUST00000112102 1101 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
Upf3bQ3ULL6 Gm14299-201ENSMUST00000117586 397 ntBASIC4.17□□□□□ -1.74
Upf3bQ3ULL6 Rpl27-ps2-201ENSMUST00000120378 399 ntBASIC4.17□□□□□ -1.74
Upf3bQ3ULL6 Gm6650-201ENSMUST00000166710 614 ntBASIC4.17□□□□□ -1.74
Upf3bQ3ULL6 Vmn1r-ps28-201ENSMUST00000174767 942 ntBASIC4.17□□□□□ -1.74
Upf3bQ3ULL6 Gm10067-201ENSMUST00000179462 348 ntBASIC4.17□□□□□ -1.74
Upf3bQ3ULL6 Cox6b2-206ENSMUST00000182738 423 ntTSL 2 BASIC4.17□□□□□ -1.74
Upf3bQ3ULL6 Mir7028-201ENSMUST00000185016 64 ntBASIC4.17□□□□□ -1.74
Upf3bQ3ULL6 AV026068-203ENSMUST00000185946 668 ntTSL 3 BASIC4.17□□□□□ -1.74
Upf3bQ3ULL6 Gm28471-201ENSMUST00000185994 615 ntBASIC4.17□□□□□ -1.74
Upf3bQ3ULL6 Gm4035-202ENSMUST00000190684 526 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
Upf3bQ3ULL6 4930420N18Rik-201ENSMUST00000191831 676 ntBASIC4.17□□□□□ -1.74
Upf3bQ3ULL6 Gm31942-201ENSMUST00000192534 827 ntTSL 5 BASIC4.17□□□□□ -1.74
Upf3bQ3ULL6 Gm44690-201ENSMUST00000207984 382 ntBASIC4.17□□□□□ -1.74
Upf3bQ3ULL6 Gm45162-201ENSMUST00000209013 618 ntBASIC4.17□□□□□ -1.74
Upf3bQ3ULL6 Gm5339-201ENSMUST00000210551 1102 ntBASIC4.17□□□□□ -1.74
Upf3bQ3ULL6 Gm19269-201ENSMUST00000211401 804 ntBASIC4.17□□□□□ -1.74
Upf3bQ3ULL6 Gm34983-201ENSMUST00000219484 396 ntTSL 3 BASIC4.17□□□□□ -1.74
Upf3bQ3ULL6 Sult1e1-201ENSMUST00000031201 1242 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
Upf3bQ3ULL6 Olfr488-201ENSMUST00000072968 945 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
Upf3bQ3ULL6 Mir30e-201ENSMUST00000083475 92 ntBASIC4.17□□□□□ -1.74
Upf3bQ3ULL6 Dock11-202ENSMUST00000115264 1725 ntTSL 5 BASIC4.17□□□□□ -1.74
Upf3bQ3ULL6 Cd53-201ENSMUST00000038845 1742 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
Upf3bQ3ULL6 Gm44678-201ENSMUST00000207828 2775 ntBASIC4.17□□□□□ -1.74
Upf3bQ3ULL6 Olfr263-202ENSMUST00000215804 3963 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
Upf3bQ3ULL6 Vmn1r62-201ENSMUST00000173956 1757 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
Upf3bQ3ULL6 Gm5155-201ENSMUST00000072381 2841 ntBASIC4.17□□□□□ -1.74
Upf3bQ3ULL6 Tmem71-201ENSMUST00000048372 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
Upf3bQ3ULL6 Olfr1150-ps1-201ENSMUST00000121186 3311 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
Upf3bQ3ULL6 Acsm3-202ENSMUST00000106526 2704 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
Upf3bQ3ULL6 Jrkl-201ENSMUST00000110582 3223 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 76.6 ms