Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Dclk1-201ENSMUST00000054237 7847 ntAPPRIS P2 TSL 1 (best) BASIC1.98□□□□□ -2.09
Ush2AQ2QI47 Olfr364-ps1-202ENSMUST00000214905 1914 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
Ush2AQ2QI47 Olfr1316-202ENSMUST00000213696 4184 ntAPPRIS ALT1 TSL 5 BASIC1.98□□□□□ -2.09
Ush2AQ2QI47 Cdh7-201ENSMUST00000027542 3390 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
Ush2AQ2QI47 Olfr711-202ENSMUST00000207200 2966 ntAPPRIS P1 TSL 2 BASIC1.98□□□□□ -2.09
Ush2AQ2QI47 4930522H14Rik-202ENSMUST00000102725 854 ntAPPRIS P3 TSL 1 (best) BASIC1.98□□□□□ -2.09
Ush2AQ2QI47 Gm3543-201ENSMUST00000111870 899 ntAPPRIS P1 TSL 3 BASIC1.98□□□□□ -2.09
Ush2AQ2QI47 Gm13976-201ENSMUST00000154367 479 ntTSL 3 BASIC1.98□□□□□ -2.09
Ush2AQ2QI47 Gm29259-201ENSMUST00000186396 694 ntBASIC1.98□□□□□ -2.09
Ush2AQ2QI47 Gm44844-201ENSMUST00000207242 336 ntBASIC1.98□□□□□ -2.09
Ush2AQ2QI47 AC154335.1-201ENSMUST00000224744 395 ntBASIC1.98□□□□□ -2.09
Ush2AQ2QI47 Zzef1-201ENSMUST00000069395 11150 ntAPPRIS P2 TSL 5 BASIC1.98□□□□□ -2.09
Ush2AQ2QI47 Xcr1-201ENSMUST00000182350 4453 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
Ush2AQ2QI47 Vmn2r50-202ENSMUST00000086298 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC1.98□□□□□ -2.09
Ush2AQ2QI47 Dgkk-201ENSMUST00000067410 7155 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
Ush2AQ2QI47 Olfr616-202ENSMUST00000214806 1641 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
Ush2AQ2QI47 Olfr616-203ENSMUST00000217293 1627 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
Ush2AQ2QI47 Mbnl1-207ENSMUST00000192607 4552 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
Ush2AQ2QI47 Peak1-201ENSMUST00000061552 6996 ntAPPRIS P2 TSL 1 (best) BASIC1.98□□□□□ -2.09
Ush2AQ2QI47 Frrs1-202ENSMUST00000195905 6823 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
Ush2AQ2QI47 Nexn-201ENSMUST00000046045 2564 ntAPPRIS P2 TSL 1 (best) BASIC1.98□□□□□ -2.09
Ush2AQ2QI47 Gm22782-201ENSMUST00000104082 132 ntBASIC1.98□□□□□ -2.09
Ush2AQ2QI47 Gm14435-202ENSMUST00000127687 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC1.98□□□□□ -2.09
Ush2AQ2QI47 Gm24053-201ENSMUST00000158620 105 ntBASIC1.98□□□□□ -2.09
Ush2AQ2QI47 Gm20830-201ENSMUST00000178016 684 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
Ush2AQ2QI47 Gm19694-201ENSMUST00000192364 505 ntBASIC1.98□□□□□ -2.09
Ush2AQ2QI47 Calcrl-202ENSMUST00000099944 3973 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
Ush2AQ2QI47 Zzef1-208ENSMUST00000207107 11306 ntAPPRIS ALT2 TSL 5 BASIC1.98□□□□□ -2.09
Ush2AQ2QI47 Zfp950-204ENSMUST00000143264 4825 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
Ush2AQ2QI47 4930556I23Rik-201ENSMUST00000160659 560 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
Ush2AQ2QI47 Gm27457-201ENSMUST00000184771 156 ntBASIC1.97□□□□□ -2.09
Ush2AQ2QI47 Gm25203-202ENSMUST00000200458 216 ntBASIC1.97□□□□□ -2.09
Ush2AQ2QI47 Gm45710-201ENSMUST00000212847 215 ntBASIC1.97□□□□□ -2.09
Ush2AQ2QI47 Gm10037-202ENSMUST00000221266 549 ntAPPRIS P5 TSL 2 BASIC1.97□□□□□ -2.09
Ush2AQ2QI47 Gm25203-201ENSMUST00000082842 215 ntBASIC1.97□□□□□ -2.09
Ush2AQ2QI47 Neto2-201ENSMUST00000109686 5610 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
Ush2AQ2QI47 Cacna1e-203ENSMUST00000187541 14921 ntAPPRIS P2 TSL 1 (best) BASIC1.97□□□□□ -2.09
Ush2AQ2QI47 Dock9-206ENSMUST00000212181 7368 ntAPPRIS ALT2 TSL 1 (best) BASIC1.97□□□□□ -2.09
Ush2AQ2QI47 Slc19a3-201ENSMUST00000045560 2974 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
Ush2AQ2QI47 Olfr748-202ENSMUST00000213101 3632 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
Ush2AQ2QI47 Gm14886-201ENSMUST00000117208 2629 ntBASIC1.97□□□□□ -2.09
Ush2AQ2QI47 Ptpn13-201ENSMUST00000048957 7915 ntAPPRIS P1 TSL 2 BASIC1.97□□□□□ -2.09
Ush2AQ2QI47 Zfp951-201ENSMUST00000089906 1356 ntAPPRIS ALT2 TSL 5 BASIC1.97□□□□□ -2.09
Ush2AQ2QI47 Pgap1-201ENSMUST00000097739 10583 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
Ush2AQ2QI47 AC115891.1-201ENSMUST00000215798 1755 ntBASIC1.97□□□□□ -2.09
Ush2AQ2QI47 Phc3-209ENSMUST00000168645 10976 ntAPPRIS P3 TSL 1 (best) BASIC1.97□□□□□ -2.09
Ush2AQ2QI47 Snora36b-201ENSMUST00000104383 132 ntBASIC1.97□□□□□ -2.09
Ush2AQ2QI47 Vmn1r-ps126-201ENSMUST00000117681 926 ntBASIC1.97□□□□□ -2.09
Ush2AQ2QI47 Gm20450-201ENSMUST00000173652 147 ntBASIC1.97□□□□□ -2.09
Ush2AQ2QI47 Gm27188-201ENSMUST00000184383 510 ntTSL 3 BASIC1.97□□□□□ -2.09
Ush2AQ2QI47 Gm21847-202ENSMUST00000198681 883 ntTSL 5 BASIC1.97□□□□□ -2.09
Ush2AQ2QI47 CT009713.6-201ENSMUST00000223615 294 ntBASIC1.97□□□□□ -2.09
Ush2AQ2QI47 Olfr1438-ps1-201ENSMUST00000208398 4761 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
Ush2AQ2QI47 Olfr1501-203ENSMUST00000215350 4395 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
Ush2AQ2QI47 Tbp-211ENSMUST00000162505 12794 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
Ush2AQ2QI47 AY512915-203ENSMUST00000159937 3650 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
Ush2AQ2QI47 Olfr986-202ENSMUST00000214763 3274 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
Ush2AQ2QI47 Col4a4-201ENSMUST00000087050 10108 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
Ush2AQ2QI47 Dbpht2-202ENSMUST00000221311 5341 ntBASIC1.97□□□□□ -2.09
Ush2AQ2QI47 Gm45635-201ENSMUST00000211516 2134 ntBASIC1.97□□□□□ -2.09
Ush2AQ2QI47 Olfr362-202ENSMUST00000213817 4059 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
Ush2AQ2QI47 Kif20b-201ENSMUST00000087341 5564 ntAPPRIS P2 TSL 5 BASIC1.97□□□□□ -2.09
Ush2AQ2QI47 Xlr3d-ps-201ENSMUST00000121687 658 ntBASIC1.97□□□□□ -2.09
Ush2AQ2QI47 Gm6762-201ENSMUST00000121769 289 ntBASIC1.97□□□□□ -2.09
Ush2AQ2QI47 Gm22073-201ENSMUST00000122668 189 ntBASIC1.97□□□□□ -2.09
Ush2AQ2QI47 Gm24958-201ENSMUST00000158009 97 ntBASIC1.97□□□□□ -2.09
Ush2AQ2QI47 Gm27505-201ENSMUST00000185071 110 ntBASIC1.97□□□□□ -2.09
Ush2AQ2QI47 Gm37433-201ENSMUST00000192695 678 ntBASIC1.97□□□□□ -2.09
Ush2AQ2QI47 Gm37441-201ENSMUST00000194430 678 ntBASIC1.97□□□□□ -2.09
Ush2AQ2QI47 Gm35552-201ENSMUST00000214355 396 ntTSL 5 BASIC1.97□□□□□ -2.09
Ush2AQ2QI47 Trdn-202ENSMUST00000217779 1182 ntAPPRIS ALT2 TSL 1 (best) BASIC1.97□□□□□ -2.09
Ush2AQ2QI47 Zfp982-201ENSMUST00000063704 1244 ntAPPRIS P1 TSL 3 BASIC1.97□□□□□ -2.09
Ush2AQ2QI47 Olfr1216-201ENSMUST00000099800 936 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
Ush2AQ2QI47 Olfr1211-204ENSMUST00000215205 4220 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
Ush2AQ2QI47 Ralgapa1-211ENSMUST00000220367 7473 ntAPPRIS ALT2 TSL 5 BASIC1.97□□□□□ -2.09
Ush2AQ2QI47 Greb1-212ENSMUST00000162112 8058 ntAPPRIS P3 TSL 5 BASIC1.97□□□□□ -2.09
Ush2AQ2QI47 Olfr1183-202ENSMUST00000213115 8258 ntTSL 5 BASIC1.97□□□□□ -2.09
Ush2AQ2QI47 Unc13b-216ENSMUST00000207708 6574 ntTSL 5 BASIC1.97□□□□□ -2.09
Ush2AQ2QI47 Mef2c-201ENSMUST00000005722 6217 ntTSL 5 BASIC1.97□□□□□ -2.09
Ush2AQ2QI47 Gm26733-201ENSMUST00000180846 2046 ntTSL 5 BASIC1.97□□□□□ -2.09
Ush2AQ2QI47 Olfr1019-202ENSMUST00000213515 3031 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
Ush2AQ2QI47 Pak3-204ENSMUST00000112865 8484 ntAPPRIS P3 TSL 5 BASIC1.97□□□□□ -2.09
Ush2AQ2QI47 Sptbn1-203ENSMUST00000102838 9107 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
Ush2AQ2QI47 Gm6545-201ENSMUST00000217186 1786 ntBASIC1.97□□□□□ -2.09
Ush2AQ2QI47 Ccdc187-202ENSMUST00000217256 9411 ntAPPRIS ALT2 TSL 5 BASIC1.97□□□□□ -2.09
Ush2AQ2QI47 Gm16383-201ENSMUST00000118122 232 ntBASIC1.97□□□□□ -2.09
Ush2AQ2QI47 Gm11869-201ENSMUST00000118701 329 ntBASIC1.97□□□□□ -2.09
Ush2AQ2QI47 Apol7d-203ENSMUST00000126516 1193 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
Ush2AQ2QI47 Gm25069-201ENSMUST00000175238 86 ntBASIC1.97□□□□□ -2.09
Ush2AQ2QI47 Gm8600-201ENSMUST00000186320 905 ntBASIC1.97□□□□□ -2.09
Ush2AQ2QI47 Gm34091-201ENSMUST00000200875 604 ntBASIC1.97□□□□□ -2.09
Ush2AQ2QI47 Olfr562-ps1-201ENSMUST00000210779 951 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
Ush2AQ2QI47 Olfr564-201ENSMUST00000061096 951 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
Ush2AQ2QI47 Gm4894-201ENSMUST00000067007 357 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
Ush2AQ2QI47 Gm22970-201ENSMUST00000083304 186 ntBASIC1.97□□□□□ -2.09
Ush2AQ2QI47 Olfr910-201ENSMUST00000215122 1996 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
Ush2AQ2QI47 A830010M20Rik-204ENSMUST00000112671 6756 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
Ush2AQ2QI47 Zfp184-201ENSMUST00000006903 2214 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
Ush2AQ2QI47 Mbd5-202ENSMUST00000112745 6037 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
Ush2AQ2QI47 Gm20631-201ENSMUST00000177239 5697 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
Retrieved 100 of 76,532 protein–RNA pairs in 88.4 ms