Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Gm42798-201ENSMUST00000200853 3972 ntBASIC5.45□□□□□ -1.54
Ebf1Q07802 Cpb2-201ENSMUST00000022576 1477 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Ebf1Q07802 Olfr57-202ENSMUST00000203906 1647 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Ebf1Q07802 Siae-201ENSMUST00000002007 3339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
Ebf1Q07802 Cnot4-203ENSMUST00000114993 3473 ntAPPRIS P4 TSL 1 (best) BASIC5.44□□□□□ -1.54
Ebf1Q07802 Slco1c1-203ENSMUST00000203140 2771 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
Ebf1Q07802 Olfr328-203ENSMUST00000215717 2793 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
Ebf1Q07802 Gm42492-201ENSMUST00000195780 2915 ntBASIC5.44□□□□□ -1.54
Ebf1Q07802 Gm37761-201ENSMUST00000194989 2098 ntBASIC5.44□□□□□ -1.54
Ebf1Q07802 Naip6-202ENSMUST00000118574 6827 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Ebf1Q07802 Gm38403-201ENSMUST00000219032 2357 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Ebf1Q07802 Trim6-201ENSMUST00000098180 3827 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Ebf1Q07802 Zzz3-204ENSMUST00000106103 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
Ebf1Q07802 Fcrl5-205ENSMUST00000194102 2449 ntAPPRIS P4 TSL 1 (best) BASIC5.44□□□□□ -1.54
Ebf1Q07802 Abcb7-201ENSMUST00000033695 5667 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Ebf1Q07802 Tcrg-V3-201ENSMUST00000103559 350 ntAPPRIS ALT2 BASIC5.44□□□□□ -1.54
Ebf1Q07802 Gm24578-201ENSMUST00000103970 129 ntBASIC5.44□□□□□ -1.54
Ebf1Q07802 Gm22272-201ENSMUST00000104039 134 ntBASIC5.44□□□□□ -1.54
Ebf1Q07802 Gm22778-201ENSMUST00000104090 128 ntBASIC5.44□□□□□ -1.54
Ebf1Q07802 Rnf148-201ENSMUST00000104979 1239 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Ebf1Q07802 Bpifc-202ENSMUST00000105304 451 ntTSL 5 BASIC5.44□□□□□ -1.54
Ebf1Q07802 Ppih-202ENSMUST00000106317 613 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Ebf1Q07802 Gm13733-201ENSMUST00000117290 535 ntBASIC5.44□□□□□ -1.54
Ebf1Q07802 Gm14163-201ENSMUST00000117342 217 ntBASIC5.44□□□□□ -1.54
Ebf1Q07802 Gm11881-201ENSMUST00000119408 572 ntBASIC5.44□□□□□ -1.54
Ebf1Q07802 Defa-ps11-201ENSMUST00000119719 299 ntBASIC5.44□□□□□ -1.54
Ebf1Q07802 Gm11227-201ENSMUST00000119774 471 ntBASIC5.44□□□□□ -1.54
Ebf1Q07802 Gm14392-201ENSMUST00000120332 401 ntBASIC5.44□□□□□ -1.54
Ebf1Q07802 Sult2a-ps2-201ENSMUST00000121135 405 ntBASIC5.44□□□□□ -1.54
Ebf1Q07802 Gm13077-201ENSMUST00000121941 484 ntBASIC5.44□□□□□ -1.54
Ebf1Q07802 Gm13409-201ENSMUST00000122072 546 ntBASIC5.44□□□□□ -1.54
Ebf1Q07802 n-R5s24-201ENSMUST00000122518 117 ntBASIC5.44□□□□□ -1.54
Ebf1Q07802 Gm25291-201ENSMUST00000122795 144 ntBASIC5.44□□□□□ -1.54
Ebf1Q07802 Gm12256-201ENSMUST00000132394 446 ntTSL 3 BASIC5.44□□□□□ -1.54
Ebf1Q07802 Gm7855-201ENSMUST00000137737 687 ntBASIC5.44□□□□□ -1.54
Ebf1Q07802 Xaf1-202ENSMUST00000140842 651 ntTSL 3 BASIC5.44□□□□□ -1.54
Ebf1Q07802 Gm23583-201ENSMUST00000158533 289 ntBASIC5.44□□□□□ -1.54
Ebf1Q07802 Ear-ps9-201ENSMUST00000161963 460 ntBASIC5.44□□□□□ -1.54
Ebf1Q07802 Gm8338-201ENSMUST00000163928 363 ntBASIC5.44□□□□□ -1.54
Ebf1Q07802 Gm25534-201ENSMUST00000175365 125 ntBASIC5.44□□□□□ -1.54
Ebf1Q07802 Gm21860-201ENSMUST00000177893 309 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Ebf1Q07802 Gm23619-201ENSMUST00000178411 94 ntBASIC5.44□□□□□ -1.54
Ebf1Q07802 Gm25474-201ENSMUST00000179052 94 ntBASIC5.44□□□□□ -1.54
Ebf1Q07802 Gm22047-201ENSMUST00000179176 94 ntBASIC5.44□□□□□ -1.54
Ebf1Q07802 Gm21748-201ENSMUST00000179623 309 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Ebf1Q07802 Mir7012-201ENSMUST00000183900 64 ntBASIC5.44□□□□□ -1.54
Ebf1Q07802 Mir6400-201ENSMUST00000184870 92 ntBASIC5.44□□□□□ -1.54
Ebf1Q07802 Gm29552-201ENSMUST00000190548 660 ntBASIC5.44□□□□□ -1.54
Ebf1Q07802 Gm38108-201ENSMUST00000193891 399 ntTSL 5 BASIC5.44□□□□□ -1.54
Ebf1Q07802 2900037B21Rik-201ENSMUST00000194352 337 ntBASIC5.44□□□□□ -1.54
Ebf1Q07802 Smr2-203ENSMUST00000196477 676 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
Ebf1Q07802 4930519L02Rik-202ENSMUST00000200254 452 ntTSL 3 BASIC5.44□□□□□ -1.54
Ebf1Q07802 Gm43262-201ENSMUST00000202970 1219 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Ebf1Q07802 Gm45171-201ENSMUST00000206360 736 ntBASIC5.44□□□□□ -1.54
Ebf1Q07802 Gm45157-201ENSMUST00000208729 401 ntBASIC5.44□□□□□ -1.54
Ebf1Q07802 Gm32817-201ENSMUST00000210007 689 ntTSL 5 BASIC5.44□□□□□ -1.54
Ebf1Q07802 Gm45731-201ENSMUST00000211988 1203 ntBASIC5.44□□□□□ -1.54
Ebf1Q07802 Gm5485-201ENSMUST00000212197 628 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Ebf1Q07802 Gm7607-201ENSMUST00000214920 518 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Ebf1Q07802 Gm30313-201ENSMUST00000216806 597 ntTSL 3 BASIC5.44□□□□□ -1.54
Ebf1Q07802 Gm5457-201ENSMUST00000022260 333 ntBASIC5.44□□□□□ -1.54
Ebf1Q07802 AC165347.1-201ENSMUST00000224089 1025 ntBASIC5.44□□□□□ -1.54
Ebf1Q07802 CT025548.1-201ENSMUST00000227459 257 ntBASIC5.44□□□□□ -1.54
Ebf1Q07802 Bcl2a1c-201ENSMUST00000066460 444 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Ebf1Q07802 Gm16415-201ENSMUST00000080097 489 ntBASIC5.44□□□□□ -1.54
Ebf1Q07802 Rpl26-ps2-201ENSMUST00000085379 435 ntBASIC5.44□□□□□ -1.54
Ebf1Q07802 Smr2-201ENSMUST00000087043 676 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
Ebf1Q07802 Rps15a-ps2-201ENSMUST00000087473 393 ntBASIC5.44□□□□□ -1.54
Ebf1Q07802 Vmn1r90-206ENSMUST00000227566 6901 ntAPPRIS ALT2 BASIC5.44□□□□□ -1.54
Ebf1Q07802 Gm43201-201ENSMUST00000195925 3416 ntBASIC5.44□□□□□ -1.54
Ebf1Q07802 AC156031.1-201ENSMUST00000217288 2555 ntBASIC5.44□□□□□ -1.54
Ebf1Q07802 Vmn1r196-204ENSMUST00000228382 6525 ntAPPRIS P2 BASIC5.44□□□□□ -1.54
Ebf1Q07802 9630002D21Rik-202ENSMUST00000222033 2345 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Ebf1Q07802 Nlrp5-202ENSMUST00000086341 3471 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
Ebf1Q07802 Gm7451-201ENSMUST00000208382 1392 ntBASIC5.43□□□□□ -1.54
Ebf1Q07802 Gm38104-201ENSMUST00000195121 1895 ntBASIC5.43□□□□□ -1.54
Ebf1Q07802 Gm37250-201ENSMUST00000194919 2388 ntBASIC5.43□□□□□ -1.54
Ebf1Q07802 Vmn2r109-201ENSMUST00000167093 2577 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Ebf1Q07802 Usp29-203ENSMUST00000198068 4420 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Ebf1Q07802 Gm3115-201ENSMUST00000166928 1797 ntAPPRIS P5 TSL 5 BASIC5.43□□□□□ -1.54
Ebf1Q07802 Gm23274-201ENSMUST00000104056 130 ntBASIC5.43□□□□□ -1.54
Ebf1Q07802 Vmn1r120-201ENSMUST00000105202 918 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
Ebf1Q07802 Rps24-201ENSMUST00000112384 468 ntAPPRIS ALT1 TSL 5 BASIC5.43□□□□□ -1.54
Ebf1Q07802 Gm11878-201ENSMUST00000117908 400 ntBASIC5.43□□□□□ -1.54
Ebf1Q07802 Rps24-ps3-201ENSMUST00000118723 402 ntBASIC5.43□□□□□ -1.54
Ebf1Q07802 Gm14434-201ENSMUST00000120521 559 ntTSL 3 BASIC5.43□□□□□ -1.54
Ebf1Q07802 Gm14362-201ENSMUST00000121679 273 ntBASIC5.43□□□□□ -1.54
Ebf1Q07802 Gm16331-201ENSMUST00000144274 498 ntBASIC5.43□□□□□ -1.54
Ebf1Q07802 Gm15254-201ENSMUST00000149567 273 ntBASIC5.43□□□□□ -1.54
Ebf1Q07802 Gm23327-201ENSMUST00000157420 78 ntBASIC5.43□□□□□ -1.54
Ebf1Q07802 Gm9294-201ENSMUST00000165198 789 ntBASIC5.43□□□□□ -1.54
Ebf1Q07802 Vmn1r-ps25-201ENSMUST00000173545 799 ntBASIC5.43□□□□□ -1.54
Ebf1Q07802 Gm23872-201ENSMUST00000175432 77 ntBASIC5.43□□□□□ -1.54
Ebf1Q07802 Vmn2r-ps6-201ENSMUST00000176317 1101 ntBASIC5.43□□□□□ -1.54
Ebf1Q07802 4930555M17Rik-201ENSMUST00000176666 402 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Ebf1Q07802 Gm26993-201ENSMUST00000182766 789 ntBASIC5.43□□□□□ -1.54
Ebf1Q07802 Gm26970-201ENSMUST00000182990 964 ntBASIC5.43□□□□□ -1.54
Ebf1Q07802 Mir7031-201ENSMUST00000183860 65 ntBASIC5.43□□□□□ -1.54
Ebf1Q07802 Gm29064-201ENSMUST00000187014 813 ntBASIC5.43□□□□□ -1.54
Ebf1Q07802 Gm37803-201ENSMUST00000191620 711 ntTSL 5 BASIC5.43□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 90.2 ms