Protein–RNA interactions for Protein: Q04887

Sox9, Transcription factor SOX-9, mousemouse

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox9Q04887 Phc3-209ENSMUST00000168645 10976 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
Sox9Q04887 Gm34240-201ENSMUST00000192500 1936 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Sox9Q04887 Gm336-201ENSMUST00000186376 1480 ntBASIC5.41□□□□□ -1.54
Sox9Q04887 Gm45160-201ENSMUST00000207112 3099 ntBASIC5.41□□□□□ -1.54
Sox9Q04887 Vmn1r9-202ENSMUST00000227399 6778 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Sox9Q04887 Gabra6-201ENSMUST00000020703 2436 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
Sox9Q04887 Gm23424-201ENSMUST00000103889 110 ntBASIC5.41□□□□□ -1.54
Sox9Q04887 Mir465c-2-201ENSMUST00000104757 81 ntBASIC5.41□□□□□ -1.54
Sox9Q04887 Gm11447-201ENSMUST00000118983 858 ntBASIC5.41□□□□□ -1.54
Sox9Q04887 Gm14901-201ENSMUST00000119001 283 ntBASIC5.41□□□□□ -1.54
Sox9Q04887 Gm12186-201ENSMUST00000119050 945 ntBASIC5.41□□□□□ -1.54
Sox9Q04887 Gm12281-201ENSMUST00000119536 298 ntBASIC5.41□□□□□ -1.54
Sox9Q04887 Gm16189-201ENSMUST00000123707 997 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Sox9Q04887 Gm16250-201ENSMUST00000148974 256 ntBASIC5.41□□□□□ -1.54
Sox9Q04887 Gm26034-201ENSMUST00000158154 116 ntBASIC5.41□□□□□ -1.54
Sox9Q04887 Gm6223-201ENSMUST00000178436 871 ntBASIC5.41□□□□□ -1.54
Sox9Q04887 5730522E02Rik-208ENSMUST00000179180 450 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
Sox9Q04887 Gm29093-201ENSMUST00000187366 409 ntTSL 5 BASIC5.41□□□□□ -1.54
Sox9Q04887 Gm3145-201ENSMUST00000188584 220 ntBASIC5.41□□□□□ -1.54
Sox9Q04887 Csn1s2a-202ENSMUST00000196585 762 ntAPPRIS ALT2 TSL 3 BASIC5.41□□□□□ -1.54
Sox9Q04887 Minpp1-ps-201ENSMUST00000203344 946 ntBASIC5.41□□□□□ -1.54
Sox9Q04887 Gm44108-201ENSMUST00000203525 422 ntBASIC5.41□□□□□ -1.54
Sox9Q04887 AC161520.1-201ENSMUST00000210954 939 ntBASIC5.41□□□□□ -1.54
Sox9Q04887 1700112M02Rik-201ENSMUST00000221719 348 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Sox9Q04887 Gm30155-201ENSMUST00000223458 339 ntBASIC5.41□□□□□ -1.54
Sox9Q04887 AL590614.1-201ENSMUST00000226037 268 ntBASIC5.41□□□□□ -1.54
Sox9Q04887 AC117202.3-201ENSMUST00000228532 310 ntBASIC5.41□□□□□ -1.54
Sox9Q04887 Gm9762-201ENSMUST00000036976 444 ntBASIC5.41□□□□□ -1.54
Sox9Q04887 Mir465c-1-201ENSMUST00000093560 81 ntBASIC5.41□□□□□ -1.54
Sox9Q04887 Olfr1220-201ENSMUST00000099789 1026 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Sox9Q04887 Olfr1220-202ENSMUST00000099806 1201 ntAPPRIS P1 TSL 3 BASIC5.41□□□□□ -1.54
Sox9Q04887 Tlr13-201ENSMUST00000040065 4060 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Sox9Q04887 Pfkfb2-202ENSMUST00000066863 4425 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
Sox9Q04887 AC116797.1-201ENSMUST00000223988 3955 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Sox9Q04887 Vmn2r33-201ENSMUST00000165921 2586 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Sox9Q04887 Vmn2r107-201ENSMUST00000042090 2586 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Sox9Q04887 4933434E20Rik-201ENSMUST00000029551 3097 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Sox9Q04887 Samd12-201ENSMUST00000078673 9019 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Sox9Q04887 Olfr224-202ENSMUST00000215322 1940 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
Sox9Q04887 Gm37846-201ENSMUST00000191840 3774 ntBASIC5.4□□□□□ -1.54
Sox9Q04887 Tmem209-204ENSMUST00000115160 3485 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
Sox9Q04887 Gm25726-201ENSMUST00000104529 129 ntBASIC5.4□□□□□ -1.54
Sox9Q04887 Pbsn-202ENSMUST00000114041 697 ntTSL 2 BASIC5.4□□□□□ -1.54
Sox9Q04887 Igkv13-87-201ENSMUST00000114214 286 ntBASIC5.4□□□□□ -1.54
Sox9Q04887 Gm11270-201ENSMUST00000117685 471 ntBASIC5.4□□□□□ -1.54
Sox9Q04887 Gm14688-201ENSMUST00000119169 303 ntBASIC5.4□□□□□ -1.54
Sox9Q04887 Gm22204-201ENSMUST00000122654 327 ntBASIC5.4□□□□□ -1.54
Sox9Q04887 Tex50-201ENSMUST00000135643 1192 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.54
Sox9Q04887 4930517O19Rik-202ENSMUST00000145018 571 ntTSL 3 BASIC5.4□□□□□ -1.54
Sox9Q04887 Gm14011-201ENSMUST00000145178 302 ntTSL 2 BASIC5.4□□□□□ -1.54
Sox9Q04887 Gm13661-201ENSMUST00000154297 318 ntTSL 3 BASIC5.4□□□□□ -1.54
Sox9Q04887 Gm26362-201ENSMUST00000158865 315 ntBASIC5.4□□□□□ -1.54
Sox9Q04887 Gm15647-201ENSMUST00000160178 691 ntTSL 3 BASIC5.4□□□□□ -1.54
Sox9Q04887 Vmn1r238-201ENSMUST00000165255 921 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
Sox9Q04887 Gm22776-201ENSMUST00000178634 94 ntBASIC5.4□□□□□ -1.54
Sox9Q04887 Gm23767-201ENSMUST00000179278 94 ntBASIC5.4□□□□□ -1.54
Sox9Q04887 Gm4842-201ENSMUST00000183237 835 ntBASIC5.4□□□□□ -1.54
Sox9Q04887 Gm27148-201ENSMUST00000185086 160 ntBASIC5.4□□□□□ -1.54
Sox9Q04887 Gm21856-201ENSMUST00000187547 696 ntBASIC5.4□□□□□ -1.54
Sox9Q04887 Gm29552-201ENSMUST00000190548 660 ntBASIC5.4□□□□□ -1.54
Sox9Q04887 Gm42539-201ENSMUST00000197009 308 ntBASIC5.4□□□□□ -1.54
Sox9Q04887 Gm43007-201ENSMUST00000197618 291 ntBASIC5.4□□□□□ -1.54
Sox9Q04887 Gm43616-201ENSMUST00000199347 409 ntTSL 3 BASIC5.4□□□□□ -1.54
Sox9Q04887 Gm10445-201ENSMUST00000203521 762 ntTSL 2 BASIC5.4□□□□□ -1.54
Sox9Q04887 Gm44071-201ENSMUST00000204180 448 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Sox9Q04887 Gm44074-201ENSMUST00000204562 337 ntBASIC5.4□□□□□ -1.54
Sox9Q04887 Gm17991-201ENSMUST00000208139 297 ntBASIC5.4□□□□□ -1.54
Sox9Q04887 BC024386-203ENSMUST00000209817 825 ntTSL 5 BASIC5.4□□□□□ -1.54
Sox9Q04887 Olfr1088-ps1-201ENSMUST00000213686 863 ntBASIC5.4□□□□□ -1.54
Sox9Q04887 Gm7495-201ENSMUST00000215099 426 ntBASIC5.4□□□□□ -1.54
Sox9Q04887 AC159809.1-201ENSMUST00000216235 520 ntTSL 5 BASIC5.4□□□□□ -1.54
Sox9Q04887 Gm18891-201ENSMUST00000216734 1087 ntBASIC5.4□□□□□ -1.54
Sox9Q04887 Olfr946-ps1-201ENSMUST00000217547 341 ntBASIC5.4□□□□□ -1.54
Sox9Q04887 AC164117.2-201ENSMUST00000222090 327 ntBASIC5.4□□□□□ -1.54
Sox9Q04887 AC121599.1-201ENSMUST00000224276 449 ntBASIC5.4□□□□□ -1.54
Sox9Q04887 AC138667.2-201ENSMUST00000224880 598 ntBASIC5.4□□□□□ -1.54
Sox9Q04887 CT025552.2-201ENSMUST00000225497 317 ntBASIC5.4□□□□□ -1.54
Sox9Q04887 U90926-201ENSMUST00000031356 520 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.54
Sox9Q04887 Pmch-201ENSMUST00000048621 749 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Sox9Q04887 Dynlrb2-201ENSMUST00000078170 515 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Sox9Q04887 Gm23927-201ENSMUST00000082466 215 ntBASIC5.4□□□□□ -1.54
Sox9Q04887 Vmn2r-ps123-201ENSMUST00000176763 2410 ntBASIC5.4□□□□□ -1.55
Sox9Q04887 Zfp708-203ENSMUST00000190566 2406 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
Sox9Q04887 Olfr432-202ENSMUST00000213211 4435 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
Sox9Q04887 AC167192.3-201ENSMUST00000224096 1567 ntBASIC5.4□□□□□ -1.55
Sox9Q04887 AC164297.6-201ENSMUST00000224643 1568 ntBASIC5.4□□□□□ -1.55
Sox9Q04887 C4bp-201ENSMUST00000027657 3045 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
Sox9Q04887 Gm45632-201ENSMUST00000211532 1888 ntBASIC5.4□□□□□ -1.55
Sox9Q04887 Mme-205ENSMUST00000194134 8039 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
Sox9Q04887 Olfr59-201ENSMUST00000143976 3088 ntAPPRIS P1 TSL 3 BASIC5.4□□□□□ -1.55
Sox9Q04887 Usp29-204ENSMUST00000200535 7540 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
Sox9Q04887 Lair1-201ENSMUST00000068865 6828 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
Sox9Q04887 Olfr1143-203ENSMUST00000111568 1970 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
Sox9Q04887 Ppp1r42-201ENSMUST00000027049 1425 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
Sox9Q04887 Olfr1131-202ENSMUST00000213302 1779 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Sox9Q04887 Gm40621-202ENSMUST00000217378 1470 ntTSL 5 BASIC5.39□□□□□ -1.55
Sox9Q04887 Fbxw26-201ENSMUST00000071917 1824 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Sox9Q04887 Olfr1383-202ENSMUST00000204706 4168 ntAPPRIS P1 TSL 3 BASIC5.39□□□□□ -1.55
Sox9Q04887 A230072E10Rik-202ENSMUST00000175825 3292 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Sox9Q04887 Gm9077-201ENSMUST00000210657 2298 ntBASIC5.39□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 73.4 ms