Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Hyal5-201ENSMUST00000031689 1838 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
Col8a1Q00780 Il12rb2-202ENSMUST00000117441 2600 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Col8a1Q00780 A230057D06Rik-201ENSMUST00000208961 3026 ntTSL 5 BASIC4.75□□□□□ -1.65
Col8a1Q00780 Gm25564-201ENSMUST00000104604 132 ntBASIC4.75□□□□□ -1.65
Col8a1Q00780 Gm24683-201ENSMUST00000104840 88 ntBASIC4.75□□□□□ -1.65
Col8a1Q00780 Defb45-201ENSMUST00000109834 385 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Col8a1Q00780 Gm12677-201ENSMUST00000118668 426 ntBASIC4.75□□□□□ -1.65
Col8a1Q00780 Gm11862-201ENSMUST00000119678 659 ntBASIC4.75□□□□□ -1.65
Col8a1Q00780 Gm14563-201ENSMUST00000120571 354 ntBASIC4.75□□□□□ -1.65
Col8a1Q00780 Sult2a-ps2-201ENSMUST00000121135 405 ntBASIC4.75□□□□□ -1.65
Col8a1Q00780 Olfr1169-ps1-201ENSMUST00000121437 233 ntBASIC4.75□□□□□ -1.65
Col8a1Q00780 Defa-ps12-201ENSMUST00000122353 193 ntBASIC4.75□□□□□ -1.65
Col8a1Q00780 Gm22073-201ENSMUST00000122668 189 ntBASIC4.75□□□□□ -1.65
Col8a1Q00780 Gm14978-201ENSMUST00000129000 304 ntTSL 3 BASIC4.75□□□□□ -1.65
Col8a1Q00780 Gm14223-201ENSMUST00000146060 517 ntTSL 3 BASIC4.75□□□□□ -1.65
Col8a1Q00780 Gm25389-201ENSMUST00000157340 286 ntBASIC4.75□□□□□ -1.65
Col8a1Q00780 Gm25430-201ENSMUST00000157614 289 ntBASIC4.75□□□□□ -1.65
Col8a1Q00780 Gm24875-201ENSMUST00000158888 104 ntBASIC4.75□□□□□ -1.65
Col8a1Q00780 1700010K23Rik-201ENSMUST00000174502 376 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Col8a1Q00780 Gm19898-201ENSMUST00000177490 251 ntBASIC4.75□□□□□ -1.65
Col8a1Q00780 Gm21828-201ENSMUST00000178050 543 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
Col8a1Q00780 Gm21866-201ENSMUST00000178428 543 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
Col8a1Q00780 Gm21725-201ENSMUST00000178519 543 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
Col8a1Q00780 Gm21800-201ENSMUST00000178559 543 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
Col8a1Q00780 Gm21852-201ENSMUST00000179125 543 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
Col8a1Q00780 Gm21764-201ENSMUST00000179219 543 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
Col8a1Q00780 Gm21891-201ENSMUST00000179284 543 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
Col8a1Q00780 Gm21904-201ENSMUST00000179522 543 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
Col8a1Q00780 Gm29093-201ENSMUST00000187366 409 ntTSL 5 BASIC4.75□□□□□ -1.65
Col8a1Q00780 Gm17916-202ENSMUST00000187634 1187 ntBASIC4.75□□□□□ -1.65
Col8a1Q00780 Gm38361-201ENSMUST00000193419 458 ntTSL 5 BASIC4.75□□□□□ -1.65
Col8a1Q00780 Gm37616-201ENSMUST00000193974 322 ntBASIC4.75□□□□□ -1.65
Col8a1Q00780 Gm43825-201ENSMUST00000199650 734 ntBASIC4.75□□□□□ -1.65
Col8a1Q00780 Gm6520-201ENSMUST00000200636 410 ntBASIC4.75□□□□□ -1.65
Col8a1Q00780 Gm18100-201ENSMUST00000200897 452 ntBASIC4.75□□□□□ -1.65
Col8a1Q00780 Gm15754-202ENSMUST00000202846 758 ntTSL 3 BASIC4.75□□□□□ -1.65
Col8a1Q00780 Gm18423-201ENSMUST00000205144 1074 ntBASIC4.75□□□□□ -1.65
Col8a1Q00780 Glud-ps-201ENSMUST00000206310 657 ntBASIC4.75□□□□□ -1.65
Col8a1Q00780 Gm44813-201ENSMUST00000207921 361 ntTSL 3 BASIC4.75□□□□□ -1.65
Col8a1Q00780 Gm45659-201ENSMUST00000209295 564 ntTSL 2 BASIC4.75□□□□□ -1.65
Col8a1Q00780 Gm46234-201ENSMUST00000218702 259 ntBASIC4.75□□□□□ -1.65
Col8a1Q00780 AC117588.2-201ENSMUST00000228340 311 ntBASIC4.75□□□□□ -1.65
Col8a1Q00780 AC121978.1-201ENSMUST00000228357 380 ntBASIC4.75□□□□□ -1.65
Col8a1Q00780 Prss37-201ENSMUST00000031967 1049 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Col8a1Q00780 Cypt3-201ENSMUST00000056754 666 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
Col8a1Q00780 H2al3-201ENSMUST00000057113 553 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
Col8a1Q00780 Olfr738-201ENSMUST00000058972 936 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
Col8a1Q00780 BC048502-201ENSMUST00000065978 718 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Col8a1Q00780 Olfr1066-201ENSMUST00000099885 942 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
Col8a1Q00780 Gm29293-201ENSMUST00000189416 2188 ntBASIC4.75□□□□□ -1.65
Col8a1Q00780 Samd12-201ENSMUST00000078673 9019 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Col8a1Q00780 Prrg1-210ENSMUST00000177904 3851 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
Col8a1Q00780 Gm27008-201ENSMUST00000182400 1360 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Col8a1Q00780 Fmo9-201ENSMUST00000027843 3065 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Col8a1Q00780 Cep57l1-204ENSMUST00000186239 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
Col8a1Q00780 Olfr739-202ENSMUST00000216949 3581 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
Col8a1Q00780 Mfap3-203ENSMUST00000108849 4827 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Col8a1Q00780 Gm5925-201ENSMUST00000105016 1497 ntBASIC4.75□□□□□ -1.65
Col8a1Q00780 Pigb-201ENSMUST00000093819 2866 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Col8a1Q00780 Trhr-201ENSMUST00000038856 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Col8a1Q00780 Vmn1r27-202ENSMUST00000226666 2969 ntAPPRIS ALT2 BASIC4.74□□□□□ -1.65
Col8a1Q00780 Lypd6-205ENSMUST00000169232 3499 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Col8a1Q00780 Gm43175-201ENSMUST00000198450 3810 ntBASIC4.74□□□□□ -1.65
Col8a1Q00780 Olfr78-204ENSMUST00000217123 4695 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Col8a1Q00780 Vmn2r80-201ENSMUST00000165834 2690 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Col8a1Q00780 Nuf2-202ENSMUST00000111368 2405 ntAPPRIS P2 TSL 1 (best) BASIC4.74□□□□□ -1.65
Col8a1Q00780 Ereg-201ENSMUST00000031324 4128 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Col8a1Q00780 Bclaf1-203ENSMUST00000185800 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
Col8a1Q00780 Gm5935-201ENSMUST00000101667 875 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Col8a1Q00780 Gm24935-201ENSMUST00000103770 110 ntBASIC4.74□□□□□ -1.65
Col8a1Q00780 Gm26396-201ENSMUST00000104093 132 ntBASIC4.74□□□□□ -1.65
Col8a1Q00780 Gm22657-201ENSMUST00000104197 132 ntBASIC4.74□□□□□ -1.65
Col8a1Q00780 Il19-202ENSMUST00000112465 880 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Col8a1Q00780 Gm14382-201ENSMUST00000117374 437 ntBASIC4.74□□□□□ -1.65
Col8a1Q00780 Gm15075-201ENSMUST00000122187 477 ntBASIC4.74□□□□□ -1.65
Col8a1Q00780 Gm25292-201ENSMUST00000122797 322 ntBASIC4.74□□□□□ -1.65
Col8a1Q00780 Spin2-ps4-201ENSMUST00000126395 762 ntBASIC4.74□□□□□ -1.65
Col8a1Q00780 Vmn1r239-ps-201ENSMUST00000127465 960 ntBASIC4.74□□□□□ -1.65
Col8a1Q00780 Mpc1-203ENSMUST00000130559 603 ntTSL 2 BASIC4.74□□□□□ -1.65
Col8a1Q00780 Spin2-ps3-201ENSMUST00000148147 762 ntBASIC4.74□□□□□ -1.65
Col8a1Q00780 Gm15866-201ENSMUST00000149048 785 ntTSL 5 BASIC4.74□□□□□ -1.65
Col8a1Q00780 Gm16019-201ENSMUST00000149538 261 ntTSL 5 BASIC4.74□□□□□ -1.65
Col8a1Q00780 Vmn1r77-201ENSMUST00000164446 921 ntAPPRIS P2 BASIC4.74□□□□□ -1.65
Col8a1Q00780 Gm3173-203ENSMUST00000166848 396 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
Col8a1Q00780 Gm20523-201ENSMUST00000174340 1124 ntBASIC4.74□□□□□ -1.65
Col8a1Q00780 Gm24810-201ENSMUST00000175317 70 ntBASIC4.74□□□□□ -1.65
Col8a1Q00780 1700010L04Rik-202ENSMUST00000178848 786 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Col8a1Q00780 Mir7012-201ENSMUST00000183900 64 ntBASIC4.74□□□□□ -1.65
Col8a1Q00780 Ighv1-45-201ENSMUST00000193677 352 ntBASIC4.74□□□□□ -1.65
Col8a1Q00780 Trav7d-5-201ENSMUST00000197128 340 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Col8a1Q00780 Gm43114-201ENSMUST00000198298 343 ntBASIC4.74□□□□□ -1.65
Col8a1Q00780 Gm42825-201ENSMUST00000198883 723 ntTSL 2 BASIC4.74□□□□□ -1.65
Col8a1Q00780 Trav7n-5-201ENSMUST00000199753 340 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Col8a1Q00780 Gm44041-201ENSMUST00000203678 396 ntBASIC4.74□□□□□ -1.65
Col8a1Q00780 Gm45063-201ENSMUST00000203726 472 ntBASIC4.74□□□□□ -1.65
Col8a1Q00780 Olfr1478-ps1-201ENSMUST00000208393 391 ntBASIC4.74□□□□□ -1.65
Col8a1Q00780 Gm45508-201ENSMUST00000209298 299 ntBASIC4.74□□□□□ -1.65
Col8a1Q00780 Gm18252-202ENSMUST00000214886 409 ntTSL 5 BASIC4.74□□□□□ -1.65
Col8a1Q00780 Gm5176-202ENSMUST00000220267 583 ntBASIC4.74□□□□□ -1.65
Col8a1Q00780 Gm16368-201ENSMUST00000222340 435 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 60.6 ms