Protein–RNA interactions for Protein: Q00420

Gabpb1, GA-binding protein subunit beta-1, mousemouse

Predictions only

Length 383 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gabpb1Q00420 Gm7754-201ENSMUST00000223075 2064 ntBASIC4.3□□□□□ -1.72
Gabpb1Q00420 2210418O10Rik-203ENSMUST00000136719 2314 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Gabpb1Q00420 2410012E07Rik-201ENSMUST00000190896 1357 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Gabpb1Q00420 Gm45804-201ENSMUST00000212137 3435 ntBASIC4.29□□□□□ -1.72
Gabpb1Q00420 Ntrk3-201ENSMUST00000039431 19703 ntAPPRIS P2 TSL 1 (best) BASIC4.29□□□□□ -1.72
Gabpb1Q00420 Gm22657-201ENSMUST00000104197 132 ntBASIC4.29□□□□□ -1.72
Gabpb1Q00420 Gm15933-201ENSMUST00000117215 616 ntBASIC4.29□□□□□ -1.72
Gabpb1Q00420 Gm15603-201ENSMUST00000119252 492 ntBASIC4.29□□□□□ -1.72
Gabpb1Q00420 Gm23171-201ENSMUST00000157159 264 ntBASIC4.29□□□□□ -1.72
Gabpb1Q00420 Gm25185-201ENSMUST00000157754 96 ntBASIC4.29□□□□□ -1.72
Gabpb1Q00420 Gm24965-201ENSMUST00000157922 106 ntBASIC4.29□□□□□ -1.72
Gabpb1Q00420 Gm3025-201ENSMUST00000163454 489 ntBASIC4.29□□□□□ -1.72
Gabpb1Q00420 Vmn1r113-201ENSMUST00000168794 894 ntTSL 5 BASIC4.29□□□□□ -1.72
Gabpb1Q00420 Gm2878-201ENSMUST00000170173 486 ntBASIC4.29□□□□□ -1.72
Gabpb1Q00420 Gm28263-201ENSMUST00000185884 400 ntBASIC4.29□□□□□ -1.72
Gabpb1Q00420 Gm20812-202ENSMUST00000189550 1230 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Gabpb1Q00420 Gm20776-201ENSMUST00000189940 700 ntBASIC4.29□□□□□ -1.72
Gabpb1Q00420 Gm37134-201ENSMUST00000195810 628 ntTSL 3 BASIC4.29□□□□□ -1.72
Gabpb1Q00420 Gm42695-201ENSMUST00000199445 818 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Gabpb1Q00420 Csn1s2a-209ENSMUST00000200322 797 ntAPPRIS ALT2 TSL 2 BASIC4.29□□□□□ -1.72
Gabpb1Q00420 Gm43028-201ENSMUST00000202561 481 ntBASIC4.29□□□□□ -1.72
Gabpb1Q00420 Gm44857-201ENSMUST00000208331 196 ntBASIC4.29□□□□□ -1.72
Gabpb1Q00420 Gm8556-201ENSMUST00000210437 664 ntBASIC4.29□□□□□ -1.72
Gabpb1Q00420 Gm36247-201ENSMUST00000211834 285 ntBASIC4.29□□□□□ -1.72
Gabpb1Q00420 Olfr682-ps1-202ENSMUST00000214399 897 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Gabpb1Q00420 Gm39302-201ENSMUST00000215184 636 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Gabpb1Q00420 AC159809.1-201ENSMUST00000216235 520 ntTSL 5 BASIC4.29□□□□□ -1.72
Gabpb1Q00420 AC165164.2-201ENSMUST00000220313 392 ntTSL 3 BASIC4.29□□□□□ -1.72
Gabpb1Q00420 Gm6841-201ENSMUST00000220602 598 ntBASIC4.29□□□□□ -1.72
Gabpb1Q00420 AC140368.1-202ENSMUST00000226131 658 ntBASIC4.29□□□□□ -1.72
Gabpb1Q00420 Olfr622-201ENSMUST00000058744 1105 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Gabpb1Q00420 Gm45131-201ENSMUST00000208051 2582 ntBASIC4.29□□□□□ -1.72
Gabpb1Q00420 Gm38212-201ENSMUST00000194081 2756 ntBASIC4.29□□□□□ -1.72
Gabpb1Q00420 Gm26717-201ENSMUST00000181713 1418 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Gabpb1Q00420 4931412I15Rik-201ENSMUST00000207844 1448 ntBASIC4.29□□□□□ -1.72
Gabpb1Q00420 Cfh-203ENSMUST00000111977 4100 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
Gabpb1Q00420 Gm44567-201ENSMUST00000205645 2631 ntBASIC4.28□□□□□ -1.72
Gabpb1Q00420 Fscb-201ENSMUST00000059833 3361 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Gabpb1Q00420 Olfr613-202ENSMUST00000214173 3840 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Gabpb1Q00420 Vmn1r32-201ENSMUST00000079584 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Gabpb1Q00420 AC135119.1-201ENSMUST00000227935 3717 ntBASIC4.28□□□□□ -1.72
Gabpb1Q00420 Olfr1263-204ENSMUST00000217065 4186 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Gabpb1Q00420 Gm42528-201ENSMUST00000200697 3418 ntBASIC4.28□□□□□ -1.72
Gabpb1Q00420 Foxp2-203ENSMUST00000115470 2692 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Gabpb1Q00420 Mir804-201ENSMUST00000103251 95 ntBASIC4.28□□□□□ -1.72
Gabpb1Q00420 Igkv14-100-201ENSMUST00000103325 350 ntAPPRIS ALT2 BASIC4.28□□□□□ -1.72
Gabpb1Q00420 Igkv4-61-201ENSMUST00000103353 284 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Gabpb1Q00420 Gm14365-201ENSMUST00000117535 587 ntBASIC4.28□□□□□ -1.72
Gabpb1Q00420 1700034E13Rik-202ENSMUST00000118724 490 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Gabpb1Q00420 Gm4852-201ENSMUST00000121202 729 ntBASIC4.28□□□□□ -1.72
Gabpb1Q00420 2610024D14Rik-201ENSMUST00000121233 294 ntBASIC4.28□□□□□ -1.72
Gabpb1Q00420 Gm12103-201ENSMUST00000121892 362 ntBASIC4.28□□□□□ -1.72
Gabpb1Q00420 Gm16563-201ENSMUST00000162673 423 ntBASIC4.28□□□□□ -1.72
Gabpb1Q00420 Gm6155-201ENSMUST00000173735 341 ntBASIC4.28□□□□□ -1.72
Gabpb1Q00420 Obox4-ps15-201ENSMUST00000178057 1140 ntBASIC4.28□□□□□ -1.72
Gabpb1Q00420 Obox4-ps19-201ENSMUST00000178284 1140 ntBASIC4.28□□□□□ -1.72
Gabpb1Q00420 Obox4-ps20-201ENSMUST00000179591 1140 ntBASIC4.28□□□□□ -1.72
Gabpb1Q00420 Obox4-ps21-201ENSMUST00000179856 1140 ntBASIC4.28□□□□□ -1.72
Gabpb1Q00420 Vmn1r181-201ENSMUST00000181796 1080 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Gabpb1Q00420 Gm19503-201ENSMUST00000187109 241 ntBASIC4.28□□□□□ -1.72
Gabpb1Q00420 1700023F02Rik-203ENSMUST00000189619 473 ntTSL 3 BASIC4.28□□□□□ -1.72
Gabpb1Q00420 1700113H08Rik-203ENSMUST00000189775 798 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Gabpb1Q00420 Gm29433-201ENSMUST00000191241 253 ntTSL 5 BASIC4.28□□□□□ -1.72
Gabpb1Q00420 Gm37708-201ENSMUST00000192337 895 ntBASIC4.28□□□□□ -1.72
Gabpb1Q00420 Csn2-204ENSMUST00000196869 879 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
Gabpb1Q00420 Csn2-208ENSMUST00000198057 827 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
Gabpb1Q00420 Gm8132-201ENSMUST00000204938 640 ntBASIC4.28□□□□□ -1.72
Gabpb1Q00420 Gm19237-201ENSMUST00000205036 1132 ntBASIC4.28□□□□□ -1.72
Gabpb1Q00420 AC151843.1-201ENSMUST00000215960 691 ntBASIC4.28□□□□□ -1.72
Gabpb1Q00420 Gm7530-201ENSMUST00000218466 605 ntBASIC4.28□□□□□ -1.72
Gabpb1Q00420 Olfr1291-ps1-202ENSMUST00000219064 897 ntBASIC4.28□□□□□ -1.72
Gabpb1Q00420 AC135377.1-201ENSMUST00000223692 463 ntBASIC4.28□□□□□ -1.72
Gabpb1Q00420 CT009733.1-201ENSMUST00000225322 425 ntBASIC4.28□□□□□ -1.72
Gabpb1Q00420 AC134864.1-201ENSMUST00000226326 511 ntBASIC4.28□□□□□ -1.72
Gabpb1Q00420 AC099612.2-201ENSMUST00000226824 721 ntBASIC4.28□□□□□ -1.72
Gabpb1Q00420 AC133654.1-201ENSMUST00000228411 672 ntBASIC4.28□□□□□ -1.72
Gabpb1Q00420 Vmn1r63-201ENSMUST00000075085 2172 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Gabpb1Q00420 AC140397.1-201ENSMUST00000225563 4562 ntBASIC4.28□□□□□ -1.72
Gabpb1Q00420 Gm13100-201ENSMUST00000117157 1439 ntBASIC4.28□□□□□ -1.72
Gabpb1Q00420 Gm43009-201ENSMUST00000199979 3566 ntBASIC4.28□□□□□ -1.72
Gabpb1Q00420 Gm8104-201ENSMUST00000168165 1761 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Gabpb1Q00420 5830444F18Rik-201ENSMUST00000194009 1992 ntBASIC4.27□□□□□ -1.73
Gabpb1Q00420 Cd226-201ENSMUST00000037142 2357 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Gabpb1Q00420 Olfr781-202ENSMUST00000204108 1304 ntAPPRIS P1 TSL 3 BASIC4.27□□□□□ -1.73
Gabpb1Q00420 Oog2-201ENSMUST00000080405 1917 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Gabpb1Q00420 Cdr1-201ENSMUST00000166381 2313 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Gabpb1Q00420 Cdh19-201ENSMUST00000094626 3914 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Gabpb1Q00420 Mmrn1-201ENSMUST00000129603 4477 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
Gabpb1Q00420 Gm22543-201ENSMUST00000104347 94 ntBASIC4.27□□□□□ -1.73
Gabpb1Q00420 Gm14628-201ENSMUST00000117508 635 ntBASIC4.27□□□□□ -1.73
Gabpb1Q00420 Gm11673-201ENSMUST00000117846 331 ntBASIC4.27□□□□□ -1.73
Gabpb1Q00420 Olfr1081-ps1-201ENSMUST00000120210 945 ntBASIC4.27□□□□□ -1.73
Gabpb1Q00420 Gm13860-201ENSMUST00000125185 452 ntTSL 3 BASIC4.27□□□□□ -1.73
Gabpb1Q00420 Gm22314-201ENSMUST00000158007 281 ntBASIC4.27□□□□□ -1.73
Gabpb1Q00420 Gm3191-201ENSMUST00000167139 346 ntBASIC4.27□□□□□ -1.73
Gabpb1Q00420 Gm42936-201ENSMUST00000174019 652 ntTSL 3 BASIC4.27□□□□□ -1.73
Gabpb1Q00420 Gm22693-201ENSMUST00000175049 442 ntBASIC4.27□□□□□ -1.73
Gabpb1Q00420 Gm27190-201ENSMUST00000184890 542 ntBASIC4.27□□□□□ -1.73
Gabpb1Q00420 Gm27286-201ENSMUST00000184934 179 ntBASIC4.27□□□□□ -1.73
Gabpb1Q00420 1700041C23Rik-201ENSMUST00000185243 395 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 80.8 ms