Protein–RNA interactions for Protein: P97952

Scn1b, Sodium channel subunit beta-1, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1bP97952 Mcmdc2-204ENSMUST00000140948 3249 ntTSL 5 BASIC4.12□□□□□ -1.75
Scn1bP97952 Olfr919-202ENSMUST00000215612 1992 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
Scn1bP97952 Cdr1-201ENSMUST00000166381 2313 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Scn1bP97952 Vmn1r81-205ENSMUST00000228764 13763 ntAPPRIS P2 BASIC4.12□□□□□ -1.75
Scn1bP97952 Gm37887-201ENSMUST00000192752 2716 ntBASIC4.12□□□□□ -1.75
Scn1bP97952 Vav3-202ENSMUST00000106576 3123 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
Scn1bP97952 Trappc13-205ENSMUST00000144060 3538 ntAPPRIS ALT1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Scn1bP97952 Olfr330-202ENSMUST00000213188 2836 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
Scn1bP97952 2310057J18Rik-202ENSMUST00000140558 1445 ntTSL 5 BASIC4.12□□□□□ -1.75
Scn1bP97952 Olfr599-202ENSMUST00000214329 2183 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
Scn1bP97952 Neurod4-201ENSMUST00000061571 3345 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
Scn1bP97952 BB287469-201ENSMUST00000110149 1851 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
Scn1bP97952 Gm4027-201ENSMUST00000164838 1850 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
Scn1bP97952 Olfr728-202ENSMUST00000213685 7087 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Scn1bP97952 Igf1-202ENSMUST00000095360 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
Scn1bP97952 9330158H04Rik-201ENSMUST00000101535 3174 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Scn1bP97952 Agtr2-201ENSMUST00000089188 3283 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
Scn1bP97952 Zfp101-204ENSMUST00000174512 3743 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Scn1bP97952 Gm15923-201ENSMUST00000119300 1169 ntBASIC4.11□□□□□ -1.75
Scn1bP97952 Gm5391-201ENSMUST00000121155 613 ntBASIC4.11□□□□□ -1.75
Scn1bP97952 Gm12162-201ENSMUST00000123422 154 ntTSL 5 BASIC4.11□□□□□ -1.75
Scn1bP97952 Gm24898-201ENSMUST00000158133 106 ntBASIC4.11□□□□□ -1.75
Scn1bP97952 Gm15657-203ENSMUST00000163077 779 ntTSL 3 BASIC4.11□□□□□ -1.75
Scn1bP97952 Gm17081-201ENSMUST00000167363 478 ntBASIC4.11□□□□□ -1.75
Scn1bP97952 1700010L04Rik-202ENSMUST00000178848 786 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Scn1bP97952 Mir6416-201ENSMUST00000183664 117 ntBASIC4.11□□□□□ -1.75
Scn1bP97952 1700022E09Rik-201ENSMUST00000185295 299 ntTSL 5 BASIC4.11□□□□□ -1.75
Scn1bP97952 Gm29570-201ENSMUST00000185813 681 ntTSL 3 BASIC4.11□□□□□ -1.75
Scn1bP97952 Gm28724-202ENSMUST00000194218 295 ntBASIC4.11□□□□□ -1.75
Scn1bP97952 Gm43408-201ENSMUST00000198263 440 ntBASIC4.11□□□□□ -1.75
Scn1bP97952 Gm44348-201ENSMUST00000200165 122 ntBASIC4.11□□□□□ -1.75
Scn1bP97952 Gm43228-201ENSMUST00000200735 264 ntBASIC4.11□□□□□ -1.75
Scn1bP97952 Gm43700-201ENSMUST00000200967 316 ntTSL 5 BASIC4.11□□□□□ -1.75
Scn1bP97952 Gm45236-201ENSMUST00000208632 229 ntBASIC4.11□□□□□ -1.75
Scn1bP97952 Gm44543-201ENSMUST00000209136 396 ntBASIC4.11□□□□□ -1.75
Scn1bP97952 Olfr494-201ENSMUST00000209743 1002 ntAPPRIS P1 TSL 3 BASIC4.11□□□□□ -1.75
Scn1bP97952 2310002D06Rik-201ENSMUST00000218103 508 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Scn1bP97952 AC118006.2-201ENSMUST00000224167 962 ntBASIC4.11□□□□□ -1.75
Scn1bP97952 AC161884.2-201ENSMUST00000224513 227 ntBASIC4.11□□□□□ -1.75
Scn1bP97952 AC164116.1-201ENSMUST00000225810 622 ntBASIC4.11□□□□□ -1.75
Scn1bP97952 AC154738.5-201ENSMUST00000227397 310 ntBASIC4.11□□□□□ -1.75
Scn1bP97952 AC154806.4-201ENSMUST00000227406 439 ntBASIC4.11□□□□□ -1.75
Scn1bP97952 Cst9-201ENSMUST00000028935 687 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
Scn1bP97952 Tmem71-201ENSMUST00000048372 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
Scn1bP97952 Gm5215-201ENSMUST00000054380 405 ntBASIC4.11□□□□□ -1.75
Scn1bP97952 Ifnk-201ENSMUST00000058595 805 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
Scn1bP97952 Olfr1013-201ENSMUST00000065626 918 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
Scn1bP97952 Olfr1014-201ENSMUST00000076250 918 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
Scn1bP97952 Olfr136-201ENSMUST00000077203 939 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
Scn1bP97952 Gm23514-201ENSMUST00000082827 130 ntBASIC4.11□□□□□ -1.75
Scn1bP97952 Gm25187-201ENSMUST00000083906 133 ntBASIC4.11□□□□□ -1.75
Scn1bP97952 Olfr154-201ENSMUST00000099918 1079 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
Scn1bP97952 Vmn2r-ps128-201ENSMUST00000176367 2570 ntBASIC4.11□□□□□ -1.75
Scn1bP97952 Olfr824-202ENSMUST00000214192 3862 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Scn1bP97952 Scml2-203ENSMUST00000077375 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
Scn1bP97952 Gm26853-201ENSMUST00000180757 4010 ntTSL 5 BASIC4.11□□□□□ -1.75
Scn1bP97952 Fam135a-206ENSMUST00000187369 4976 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
Scn1bP97952 Gm44435-201ENSMUST00000204379 4119 ntBASIC4.11□□□□□ -1.75
Scn1bP97952 Gm15095-201ENSMUST00000118996 1430 ntBASIC4.11□□□□□ -1.75
Scn1bP97952 Cast-208ENSMUST00000223033 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
Scn1bP97952 AC091683.1-201ENSMUST00000222307 2446 ntBASIC4.11□□□□□ -1.75
Scn1bP97952 Obox1-201ENSMUST00000067288 1512 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
Scn1bP97952 Gm609-201ENSMUST00000114585 2122 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Scn1bP97952 Gm38069-201ENSMUST00000195360 2144 ntBASIC4.1□□□□□ -1.75
Scn1bP97952 Gm37625-201ENSMUST00000194969 4872 ntBASIC4.1□□□□□ -1.75
Scn1bP97952 Olfr1440-208ENSMUST00000217062 7484 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
Scn1bP97952 Gm43913-201ENSMUST00000203924 3029 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
Scn1bP97952 Gm36927-201ENSMUST00000192504 1841 ntBASIC4.1□□□□□ -1.75
Scn1bP97952 Gm12520-201ENSMUST00000117493 316 ntBASIC4.1□□□□□ -1.75
Scn1bP97952 Hmgb1-ps2-201ENSMUST00000117548 636 ntBASIC4.1□□□□□ -1.75
Scn1bP97952 Gm15426-201ENSMUST00000117823 556 ntBASIC4.1□□□□□ -1.75
Scn1bP97952 Zcchc9-ps-201ENSMUST00000117884 786 ntBASIC4.1□□□□□ -1.75
Scn1bP97952 Gm13379-201ENSMUST00000118053 621 ntBASIC4.1□□□□□ -1.75
Scn1bP97952 Hmgb1-ps3-201ENSMUST00000118415 636 ntBASIC4.1□□□□□ -1.75
Scn1bP97952 Gm2003-201ENSMUST00000118537 636 ntBASIC4.1□□□□□ -1.75
Scn1bP97952 Gm15387-201ENSMUST00000120421 648 ntBASIC4.1□□□□□ -1.75
Scn1bP97952 Gm14125-202ENSMUST00000120921 756 ntBASIC4.1□□□□□ -1.75
Scn1bP97952 4930558G05Rik-201ENSMUST00000122848 494 ntTSL 5 BASIC4.1□□□□□ -1.75
Scn1bP97952 Gm15533-201ENSMUST00000126205 465 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
Scn1bP97952 Gm1989-201ENSMUST00000126244 636 ntBASIC4.1□□□□□ -1.75
Scn1bP97952 4930597A21Rik-201ENSMUST00000128652 698 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
Scn1bP97952 1700046C09Rik-201ENSMUST00000139973 543 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
Scn1bP97952 4933411O13Rik-202ENSMUST00000140815 370 ntTSL 3 BASIC4.1□□□□□ -1.75
Scn1bP97952 Gm23585-201ENSMUST00000157656 102 ntBASIC4.1□□□□□ -1.75
Scn1bP97952 Gm23385-201ENSMUST00000158592 295 ntBASIC4.1□□□□□ -1.75
Scn1bP97952 Gm8653-201ENSMUST00000163096 924 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
Scn1bP97952 Vmn1r117-201ENSMUST00000166937 924 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
Scn1bP97952 Gm17655-201ENSMUST00000167969 255 ntBASIC4.1□□□□□ -1.75
Scn1bP97952 Gm6164-201ENSMUST00000169774 924 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
Scn1bP97952 Olfr296-ps1-201ENSMUST00000173904 1102 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
Scn1bP97952 Gm22776-201ENSMUST00000178634 94 ntBASIC4.1□□□□□ -1.75
Scn1bP97952 Gm23767-201ENSMUST00000179278 94 ntBASIC4.1□□□□□ -1.75
Scn1bP97952 Hmgb1-ps9-201ENSMUST00000179479 645 ntBASIC4.1□□□□□ -1.75
Scn1bP97952 1700063H06Rik-201ENSMUST00000183678 445 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
Scn1bP97952 Gm29460-201ENSMUST00000188607 714 ntBASIC4.1□□□□□ -1.75
Scn1bP97952 Gm28997-201ENSMUST00000188759 429 ntBASIC4.1□□□□□ -1.75
Scn1bP97952 Gm5368-201ENSMUST00000189012 589 ntBASIC4.1□□□□□ -1.75
Scn1bP97952 Gm28190-201ENSMUST00000189766 722 ntBASIC4.1□□□□□ -1.75
Scn1bP97952 Mug-ps1-203ENSMUST00000190643 655 ntTSL 3 BASIC4.1□□□□□ -1.75
Scn1bP97952 Gm37164-201ENSMUST00000192809 637 ntBASIC4.1□□□□□ -1.75
Retrieved 100 of 76,532 protein–RNA pairs in 68.4 ms