Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Gm23872-201ENSMUST00000175432 77 ntBASIC5.03□□□□□ -1.6
Sf3b6P59708 Gm20657-201ENSMUST00000177079 515 ntBASIC5.03□□□□□ -1.6
Sf3b6P59708 Gm20620-201ENSMUST00000177528 168 ntBASIC5.03□□□□□ -1.6
Sf3b6P59708 Gm2916-201ENSMUST00000178392 384 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Sf3b6P59708 Gm10410-201ENSMUST00000180138 384 ntBASIC5.03□□□□□ -1.6
Sf3b6P59708 1110046J04Rik-203ENSMUST00000181800 777 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Sf3b6P59708 Gm27781-201ENSMUST00000185185 92 ntBASIC5.03□□□□□ -1.6
Sf3b6P59708 Gm18444-201ENSMUST00000191239 629 ntBASIC5.03□□□□□ -1.6
Sf3b6P59708 Gm37757-201ENSMUST00000193072 210 ntBASIC5.03□□□□□ -1.6
Sf3b6P59708 Gm43043-201ENSMUST00000196579 412 ntBASIC5.03□□□□□ -1.6
Sf3b6P59708 Gm42425-201ENSMUST00000197756 565 ntTSL 5 BASIC5.03□□□□□ -1.6
Sf3b6P59708 4930519H02Rik-202ENSMUST00000198907 968 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Sf3b6P59708 Gm44468-201ENSMUST00000199516 105 ntBASIC5.03□□□□□ -1.6
Sf3b6P59708 Gm4083-201ENSMUST00000207158 451 ntBASIC5.03□□□□□ -1.6
Sf3b6P59708 Gm45375-201ENSMUST00000210338 280 ntBASIC5.03□□□□□ -1.6
Sf3b6P59708 Gm7751-201ENSMUST00000212868 709 ntBASIC5.03□□□□□ -1.6
Sf3b6P59708 AC159821.1-201ENSMUST00000214934 248 ntTSL 3 BASIC5.03□□□□□ -1.6
Sf3b6P59708 Gm18116-201ENSMUST00000220920 537 ntBASIC5.03□□□□□ -1.6
Sf3b6P59708 AC124595.1-201ENSMUST00000221799 646 ntTSL 3 BASIC5.03□□□□□ -1.6
Sf3b6P59708 Gm11360-201ENSMUST00000221898 262 ntBASIC5.03□□□□□ -1.6
Sf3b6P59708 4930442G10Rik-202ENSMUST00000221968 1096 ntTSL 5 BASIC5.03□□□□□ -1.6
Sf3b6P59708 Rpl29-ps2-203ENSMUST00000222043 1036 ntTSL 5 BASIC5.03□□□□□ -1.6
Sf3b6P59708 AC124489.2-201ENSMUST00000223930 589 ntBASIC5.03□□□□□ -1.6
Sf3b6P59708 AC125399.1-201ENSMUST00000224236 595 ntBASIC5.03□□□□□ -1.6
Sf3b6P59708 Sprr2k-201ENSMUST00000067102 637 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Sf3b6P59708 Gm23515-201ENSMUST00000082829 107 ntBASIC5.03□□□□□ -1.6
Sf3b6P59708 Rpl31-ps17-201ENSMUST00000097040 378 ntBASIC5.03□□□□□ -1.6
Sf3b6P59708 Gm38351-201ENSMUST00000195466 2518 ntBASIC5.03□□□□□ -1.6
Sf3b6P59708 Gp6-202ENSMUST00000206928 5900 ntAPPRIS P2 TSL 1 (best) BASIC5.03□□□□□ -1.6
Sf3b6P59708 Sirpb1b-202ENSMUST00000192382 1437 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
Sf3b6P59708 Zfp78-201ENSMUST00000086323 1443 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
Sf3b6P59708 Gm8297-202ENSMUST00000171964 1759 ntAPPRIS P5 TSL 5 BASIC5.03□□□□□ -1.6
Sf3b6P59708 Slfn14-201ENSMUST00000163961 3706 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Sf3b6P59708 Fam26d-201ENSMUST00000048052 3711 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Sf3b6P59708 Olfr1097-202ENSMUST00000217403 4430 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Sf3b6P59708 Ctsm-202ENSMUST00000223778 1905 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Sf3b6P59708 Hgf-201ENSMUST00000030683 2642 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Sf3b6P59708 Kdm4c-202ENSMUST00000077851 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Sf3b6P59708 Rbm41-201ENSMUST00000033810 2787 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Sf3b6P59708 Olfr812-203ENSMUST00000205013 1718 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Sf3b6P59708 Akap11-201ENSMUST00000022593 5688 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
Sf3b6P59708 Hbp1-201ENSMUST00000167458 2733 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Sf3b6P59708 Sh2d1b1-201ENSMUST00000179976 2544 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Sf3b6P59708 Lrriq1-201ENSMUST00000020043 2542 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Sf3b6P59708 Cdk14-201ENSMUST00000030763 4851 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
Sf3b6P59708 Gm732-201ENSMUST00000101290 1661 ntAPPRIS P2 TSL 1 (best) BASIC5.02□□□□□ -1.61
Sf3b6P59708 Il31ra-201ENSMUST00000051756 3680 ntAPPRIS P2 TSL 1 (best) BASIC5.02□□□□□ -1.61
Sf3b6P59708 Dtna-206ENSMUST00000221880 4490 ntAPPRIS ALT2 TSL 2 BASIC5.02□□□□□ -1.61
Sf3b6P59708 Atad2-208ENSMUST00000228783 3472 ntAPPRIS ALT2 BASIC5.02□□□□□ -1.61
Sf3b6P59708 Samd3-202ENSMUST00000164660 2620 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
Sf3b6P59708 Samd3-203ENSMUST00000218301 2620 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
Sf3b6P59708 Gm12794-201ENSMUST00000052027 1452 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Sf3b6P59708 Vmn1r66-203ENSMUST00000227719 2765 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Sf3b6P59708 Amy2a3-201ENSMUST00000179314 3717 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Sf3b6P59708 Amy2a4-201ENSMUST00000179568 3717 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Sf3b6P59708 Amy2a2-201ENSMUST00000098667 3717 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Sf3b6P59708 Olfr1273-ps-201ENSMUST00000214356 4698 ntAPPRIS P1 TSL 3 BASIC5.02□□□□□ -1.61
Sf3b6P59708 Tnrc6a-201ENSMUST00000094053 8183 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Sf3b6P59708 C230085N15Rik-201ENSMUST00000194893 4327 ntBASIC5.02□□□□□ -1.61
Sf3b6P59708 Rbm46-202ENSMUST00000182637 2058 ntTSL 5 BASIC5.02□□□□□ -1.61
Sf3b6P59708 Gm11623-201ENSMUST00000120176 1225 ntBASIC5.02□□□□□ -1.61
Sf3b6P59708 Xlr5e-ps-201ENSMUST00000122043 711 ntBASIC5.02□□□□□ -1.61
Sf3b6P59708 Gm11861-201ENSMUST00000141571 382 ntTSL 3 BASIC5.02□□□□□ -1.61
Sf3b6P59708 Gm22084-201ENSMUST00000157585 105 ntBASIC5.02□□□□□ -1.61
Sf3b6P59708 2610528A11Rik-201ENSMUST00000179488 754 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Sf3b6P59708 Gm27028-201ENSMUST00000182303 399 ntBASIC5.02□□□□□ -1.61
Sf3b6P59708 Mir7082-201ENSMUST00000183526 92 ntBASIC5.02□□□□□ -1.61
Sf3b6P59708 Mir6244-201ENSMUST00000184156 117 ntBASIC5.02□□□□□ -1.61
Sf3b6P59708 1700110C19Rik-202ENSMUST00000188715 717 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Sf3b6P59708 Gm28891-202ENSMUST00000189333 927 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Sf3b6P59708 4930449A18Rik-202ENSMUST00000192453 1200 ntBASIC5.02□□□□□ -1.61
Sf3b6P59708 Gm37495-201ENSMUST00000194590 264 ntBASIC5.02□□□□□ -1.61
Sf3b6P59708 Gm43559-201ENSMUST00000198755 466 ntBASIC5.02□□□□□ -1.61
Sf3b6P59708 Gm36633-201ENSMUST00000205873 647 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Sf3b6P59708 Gm34350-201ENSMUST00000208898 481 ntTSL 5 BASIC5.02□□□□□ -1.61
Sf3b6P59708 BC024386-204ENSMUST00000209842 688 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Sf3b6P59708 Gm19921-201ENSMUST00000210505 703 ntBASIC5.02□□□□□ -1.61
Sf3b6P59708 AC160123.1-201ENSMUST00000213443 570 ntTSL 5 BASIC5.02□□□□□ -1.61
Sf3b6P59708 Gm6068-201ENSMUST00000222270 387 ntBASIC5.02□□□□□ -1.61
Sf3b6P59708 Gm5955-201ENSMUST00000222712 219 ntBASIC5.02□□□□□ -1.61
Sf3b6P59708 AC154576.1-201ENSMUST00000225864 563 ntBASIC5.02□□□□□ -1.61
Sf3b6P59708 Olfr744-201ENSMUST00000066457 1105 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Sf3b6P59708 Glipr1l1-201ENSMUST00000073617 896 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Sf3b6P59708 Gm4017-201ENSMUST00000084813 338 ntBASIC5.02□□□□□ -1.61
Sf3b6P59708 Dclre1a-204ENSMUST00000182276 4066 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Sf3b6P59708 Olfr329-ps-203ENSMUST00000219448 4052 ntAPPRIS P2 TSL 5 BASIC5.02□□□□□ -1.61
Sf3b6P59708 Olfr1224-ps1-206ENSMUST00000216976 2019 ntAPPRIS P1 TSL 3 BASIC5.02□□□□□ -1.61
Sf3b6P59708 Olfr911-ps1-202ENSMUST00000216496 3576 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Sf3b6P59708 Ryr3-204ENSMUST00000134358 14958 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
Sf3b6P59708 Gm20826-202ENSMUST00000185348 4605 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Sf3b6P59708 6820402A03Rik-201ENSMUST00000194648 2654 ntBASIC5.01□□□□□ -1.61
Sf3b6P59708 Cr2-208ENSMUST00000195120 6212 ntTSL 5 BASIC5.01□□□□□ -1.61
Sf3b6P59708 Olfr178-202ENSMUST00000206523 2095 ntAPPRIS P1 TSL 3 BASIC5.01□□□□□ -1.61
Sf3b6P59708 Cxcr6-202ENSMUST00000216072 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
Sf3b6P59708 Olfr951-202ENSMUST00000216107 1947 ntAPPRIS ALT2 TSL 3 BASIC5.01□□□□□ -1.61
Sf3b6P59708 A830019P07Rik-201ENSMUST00000178904 1777 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Sf3b6P59708 Ppp1r1c-202ENSMUST00000090760 2644 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Sf3b6P59708 Acsm3-202ENSMUST00000106526 2704 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Sf3b6P59708 Gm22374-201ENSMUST00000104583 132 ntBASIC5.01□□□□□ -1.61
Sf3b6P59708 Tex38-201ENSMUST00000106521 802 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 67.6 ms